RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 KLHL11Q9NVR0 708 aa15.3■□□□□ 0.04
SPG7-210ENST00000564409 HS3ST3A1Q9Y663 406 aa15.3■□□□□ 0.04
SPG7-210ENST00000564409 WASF2Q9Y6W5 498 aa15.3■□□□□ 0.04
SPG7-210ENST00000564409 TDRD6O60522 2096 aaKnown RBP15.29■□□□□ 0.04
SPG7-210ENST00000564409 SIGLEC16A6NMB1 481 aa15.29■□□□□ 0.04
SPG7-210ENST00000564409 TAF4O00268 1085 aa15.29■□□□□ 0.04
SPG7-210ENST00000564409 RFPL3O75679 317 aa15.29■□□□□ 0.04
SPG7-210ENST00000564409 PCDH8O95206 1070 aa15.29■□□□□ 0.04
SPG7-210ENST00000564409 PLEKP08567 350 aaPredicted RBP15.29■□□□□ 0.04
SPG7-210ENST00000564409 GPD1P21695 349 aa15.29■□□□□ 0.04
SPG7-210ENST00000564409 GLDCP23378 1020 aa15.29■□□□□ 0.04
SPG7-210ENST00000564409 L1CAMP32004 1257 aa15.29■□□□□ 0.04
SPG7-210ENST00000564409 ARF5P84085 180 aa15.29■□□□□ 0.04
SPG7-210ENST00000564409 POLD3Q15054 466 aaPredicted RBP15.29■□□□□ 0.04
SPG7-210ENST00000564409 CDO1Q16878 200 aa15.29■□□□□ 0.04
SPG7-210ENST00000564409 C15orf59Q2T9L4 293 aaPredicted RBP15.29■□□□□ 0.04
SPG7-210ENST00000564409 HS1BP3Q53T59 392 aa15.29■□□□□ 0.04
SPG7-210ENST00000564409 RWDD4Q6NW29 188 aaKnown RBP15.29■□□□□ 0.04
SPG7-210ENST00000564409 FBXL19Q6PCT2 694 aa15.29■□□□□ 0.04
SPG7-210ENST00000564409 NLRP14Q86W24 1093 aa15.29■□□□□ 0.04
SPG7-210ENST00000564409 CACTIN-AS1Q8N1I8 211 aa15.29■□□□□ 0.04
SPG7-210ENST00000564409 GRIN3AQ8TCU5 1115 aa15.29■□□□□ 0.04
SPG7-210ENST00000564409 FAM172AQ8WUF8 416 aa15.29■□□□□ 0.04
SPG7-210ENST00000564409 CASKIN2Q8WXE0 1202 aa15.29■□□□□ 0.04
SPG7-210ENST00000564409 TSC1Q92574 1164 aa15.29■□□□□ 0.04
SPG7-210ENST00000564409 ARHGEF2Q92974 986 aaKnown RBP15.29■□□□□ 0.04
SPG7-210ENST00000564409 TBC1D31Q96DN5 1066 aa15.29■□□□□ 0.04
SPG7-210ENST00000564409 NAT10Q9H0A0 1025 aaKnown RBP15.29■□□□□ 0.04
SPG7-210ENST00000564409 TNKS2Q9H2K2 1166 aa15.29■□□□□ 0.04
SPG7-210ENST00000564409 DONSONQ9NYP3 566 aa15.29■□□□□ 0.04
SPG7-210ENST00000564409 MYO6Q9UM54 1294 aa15.29■□□□□ 0.04
SPG7-210ENST00000564409 APC2O95996 2303 aa15.29■□□□□ 0.04
SPG7-210ENST00000564409 URB1O60287 2271 aaKnown RBP15.29■□□□□ 0.04
SPG7-210ENST00000564409 SLC31A1O15431 190 aa15.28■□□□□ 0.04
SPG7-210ENST00000564409 RAMP2O60895 175 aa15.28■□□□□ 0.04
SPG7-210ENST00000564409 LRIG2O94898 1065 aa15.28■□□□□ 0.04
SPG7-210ENST00000564409 POP4O95707 220 aaKnown RBP15.28■□□□□ 0.04
SPG7-210ENST00000564409 GSRP00390 522 aa15.28■□□□□ 0.04
SPG7-210ENST00000564409 THEGLP0DJG4 465 aa15.28■□□□□ 0.04
SPG7-210ENST00000564409 ADRB3P13945 408 aa15.28■□□□□ 0.04
SPG7-210ENST00000564409 CKMT2P17540 419 aa15.28■□□□□ 0.04
SPG7-210ENST00000564409 RFC1P35251 1148 aaPredicted RBP15.28■□□□□ 0.04
SPG7-210ENST00000564409 ACADVLP49748 655 aa15.28■□□□□ 0.04
SPG7-210ENST00000564409 DNA2P51530 1060 aa15.28■□□□□ 0.04
SPG7-210ENST00000564409 CCNHP51946 323 aaPredicted RBP15.28■□□□□ 0.04
SPG7-210ENST00000564409 HDAC4P56524 1084 aa15.28■□□□□ 0.04
SPG7-210ENST00000564409 SNRPD1P62314 119 aaKnown RBP15.28■□□□□ 0.04
SPG7-210ENST00000564409 ZNF211Q13398 564 aaPredicted RBP15.28■□□□□ 0.04
SPG7-210ENST00000564409 CAMK2BQ13554 666 aa15.28■□□□□ 0.04
SPG7-210ENST00000564409 TMEM259Q4ZIN3 620 aa15.28■□□□□ 0.04
SPG7-210ENST00000564409 DHRS13Q6UX07 377 aa15.28■□□□□ 0.04
SPG7-210ENST00000564409 ABI3BPQ7Z7G0 1075 aa15.28■□□□□ 0.04
SPG7-210ENST00000564409 SLFN11Q7Z7L1 901 aa15.28■□□□□ 0.04
SPG7-210ENST00000564409 JOSD2Q8TAC2 188 aa15.28■□□□□ 0.04
SPG7-210ENST00000564409 ARHGEF26Q96DR7 871 aa15.28■□□□□ 0.04
SPG7-210ENST00000564409 PCDHB18PQ96TA0 734 aa15.28■□□□□ 0.04
SPG7-210ENST00000564409 OSBPL1AQ9BXW6 950 aa15.28■□□□□ 0.04
SPG7-210ENST00000564409 HECAQ9UBI9 543 aaPredicted RBP15.28■□□□□ 0.04
SPG7-210ENST00000564409 DMXL2Q8TDJ6 3036 aa15.28■□□□□ 0.04
SPG7-210ENST00000564409 ADAMTS20P59510 1910 aa15.27■□□□□ 0.04
SPG7-210ENST00000564409 MYLKQ15746 1914 aa15.27■□□□□ 0.04
SPG7-210ENST00000564409 WDFY3Q8IZQ1 3526 aa15.27■□□□□ 0.04
SPG7-210ENST00000564409 TRABD2BA6NFA1 517 aa15.27■□□□□ 0.04
SPG7-210ENST00000564409 RIOK3O14730 519 aaKnown RBP15.27■□□□□ 0.04
SPG7-210ENST00000564409 TSPAN6O43657 245 aa15.27■□□□□ 0.04
SPG7-210ENST00000564409 FERP16591 822 aa15.27■□□□□ 0.04
SPG7-210ENST00000564409 HTR7P34969 479 aa15.27■□□□□ 0.04
SPG7-210ENST00000564409 ZNF143P52747 638 aaPredicted RBP15.27■□□□□ 0.04
SPG7-210ENST00000564409 YBEYP58557 167 aaPredicted RBP15.27■□□□□ 0.04
SPG7-210ENST00000564409 RAD51Q06609 339 aa15.27■□□□□ 0.04
SPG7-210ENST00000564409 BNIP3Q12983 259 aa15.27■□□□□ 0.04
SPG7-210ENST00000564409 CCDC157Q569K6 752 aa15.27■□□□□ 0.04
SPG7-210ENST00000564409 EFHC2Q5JST6 749 aa15.27■□□□□ 0.04
SPG7-210ENST00000564409 CCDC183Q5T5S1 534 aa15.27■□□□□ 0.04
SPG7-210ENST00000564409 DNAJC24Q6P3W2 148 aa15.27■□□□□ 0.04
SPG7-210ENST00000564409 WDR59Q6PJI9 974 aa15.27■□□□□ 0.04
SPG7-210ENST00000564409 MON1BQ7L1V2 547 aa15.27■□□□□ 0.04
SPG7-210ENST00000564409 ASB12Q8WXK4 309 aa15.27■□□□□ 0.04
SPG7-210ENST00000564409 VCPIP1Q96JH7 1222 aa15.27■□□□□ 0.04
SPG7-210ENST00000564409 AGPAT1Q99943 283 aa15.27■□□□□ 0.04
SPG7-210ENST00000564409 CNPY3Q9BT09 278 aa15.27■□□□□ 0.04
SPG7-210ENST00000564409 SLC17A9Q9BYT1 436 aa15.27■□□□□ 0.04
SPG7-210ENST00000564409 FADS3Q9Y5Q0 445 aa15.27■□□□□ 0.04
SPG7-210ENST00000564409 ZZEF1O43149 2961 aa15.27■□□□□ 0.03
SPG7-210ENST00000564409 A6NNZ2 444 aa15.26■□□□□ 0.03
SPG7-210ENST00000564409 KDELR3O43731 214 aa15.26■□□□□ 0.03
SPG7-210ENST00000564409 CD160O95971 181 aa15.26■□□□□ 0.03
SPG7-210ENST00000564409 JUPP14923 745 aa15.26■□□□□ 0.03
SPG7-210ENST00000564409 PRLRP16471 622 aa15.26■□□□□ 0.03
SPG7-210ENST00000564409 ACP1P24666 158 aa15.26■□□□□ 0.03
SPG7-210ENST00000564409 ACVRL1P37023 503 aa15.26■□□□□ 0.03
SPG7-210ENST00000564409 E2F1Q01094 437 aa15.26■□□□□ 0.03
SPG7-210ENST00000564409 SGCGQ13326 291 aa15.26■□□□□ 0.03
SPG7-210ENST00000564409 INO80DQ53TQ3 878 aaPredicted RBP15.26■□□□□ 0.03
SPG7-210ENST00000564409 ZNF805Q5CZA5 627 aa15.26■□□□□ 0.03
SPG7-210ENST00000564409 CCDC185Q8N715 623 aa15.26■□□□□ 0.03
SPG7-210ENST00000564409 OR2AP1Q8NGE2 309 aa15.26■□□□□ 0.03
SPG7-210ENST00000564409 LENG8Q96PV6 779 aaPredicted RBP15.26■□□□□ 0.03
SPG7-210ENST00000564409 CATSPERBQ9H7T0 1116 aa15.26■□□□□ 0.03
SPG7-210ENST00000564409 SCUBE2Q9NQ36 999 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms