RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 ITFG1Q8TB96 612 aa12.76□□□□□ -0.37
COMMD4-209ENST00000564068 FAM193BQ96PV7 902 aaPredicted RBP12.76□□□□□ -0.37
COMMD4-209ENST00000564068 RBBP8Q99708 897 aa12.76□□□□□ -0.37
COMMD4-209ENST00000564068 SH3GL1Q99961 368 aa12.76□□□□□ -0.37
COMMD4-209ENST00000564068 MORF4L1Q9UBU8 362 aa12.76□□□□□ -0.37
COMMD4-209ENST00000564068 PDE4DIPQ5VU43 2346 aa12.76□□□□□ -0.37
COMMD4-209ENST00000564068 SNED1Q8TER0 1413 aa12.76□□□□□ -0.37
COMMD4-209ENST00000564068 HACD1B0YJ81 288 aa12.76□□□□□ -0.37
COMMD4-209ENST00000564068 SOAT2O75908 522 aa12.76□□□□□ -0.37
COMMD4-209ENST00000564068 CELF2O95319 508 aaKnown RBP12.76□□□□□ -0.37
COMMD4-209ENST00000564068 VNN1O95497 513 aa12.76□□□□□ -0.37
COMMD4-209ENST00000564068 GSNP06396 782 aa12.76□□□□□ -0.37
COMMD4-209ENST00000564068 BNIP3Q12983 259 aa12.76□□□□□ -0.37
COMMD4-209ENST00000564068 TLR1Q15399 786 aa12.76□□□□□ -0.37
COMMD4-209ENST00000564068 FSTL4Q6MZW2 842 aa12.76□□□□□ -0.37
COMMD4-209ENST00000564068 FNDC5Q8NAU1 212 aa12.76□□□□□ -0.37
COMMD4-209ENST00000564068 AGBL3Q8NEM8 1001 aa12.76□□□□□ -0.37
COMMD4-209ENST00000564068 OR9Q1Q8NGQ5 310 aa12.76□□□□□ -0.37
COMMD4-209ENST00000564068 CEP44Q9C0F1 390 aa12.76□□□□□ -0.37
COMMD4-209ENST00000564068 CNGB3Q9NQW8 809 aa12.76□□□□□ -0.37
COMMD4-209ENST00000564068 CHRAC1Q9NRG0 131 aa12.76□□□□□ -0.37
COMMD4-209ENST00000564068 ANKRD6Q9Y2G4 727 aa12.76□□□□□ -0.37
COMMD4-209ENST00000564068 MTF2Q9Y483 593 aaPredicted RBP12.76□□□□□ -0.37
COMMD4-209ENST00000564068 TEX264Q9Y6I9 313 aa12.76□□□□□ -0.37
COMMD4-209ENST00000564068 A0A088AWK7 358 aa12.76□□□□□ -0.37
COMMD4-209ENST00000564068 DYTNA2CJ06 578 aa12.76□□□□□ -0.37
COMMD4-209ENST00000564068 KLF11O14901 512 aa12.76□□□□□ -0.37
COMMD4-209ENST00000564068 DNAJA2O60884 412 aa12.76□□□□□ -0.37
COMMD4-209ENST00000564068 YBX3P16989 372 aaKnown RBP eCLIP12.76□□□□□ -0.37
COMMD4-209ENST00000564068 EPHX2P34913 555 aa12.76□□□□□ -0.37
COMMD4-209ENST00000564068 RUNX1T1Q06455 604 aa12.76□□□□□ -0.37
COMMD4-209ENST00000564068 SQLEQ14534 574 aa12.76□□□□□ -0.37
COMMD4-209ENST00000564068 NR6A1Q15406 480 aa12.76□□□□□ -0.37
COMMD4-209ENST00000564068 PFKFB4Q16877 469 aa12.76□□□□□ -0.37
COMMD4-209ENST00000564068 INSCQ1MX18 579 aa12.76□□□□□ -0.37
COMMD4-209ENST00000564068 ATG16L2Q8NAA4 619 aa12.76□□□□□ -0.37
COMMD4-209ENST00000564068 AFG1LQ8WV93 481 aa12.76□□□□□ -0.37
COMMD4-209ENST00000564068 APOL5Q9BWW9 433 aa12.76□□□□□ -0.37
COMMD4-209ENST00000564068 ARHGAP28Q9P2N2 729 aa12.76□□□□□ -0.37
COMMD4-209ENST00000564068 ADAM28Q9UKQ2 775 aa12.76□□□□□ -0.37
COMMD4-209ENST00000564068 SATB2Q9UPW6 733 aa12.76□□□□□ -0.37
COMMD4-209ENST00000564068 CCDC154A6NI56 674 aa12.75□□□□□ -0.37
COMMD4-209ENST00000564068 BOLA2-SMG1P6H3BVE0 249 aa12.75□□□□□ -0.37
COMMD4-209ENST00000564068 MAGEB3O15480 346 aa12.75□□□□□ -0.37
COMMD4-209ENST00000564068 TAF6P49848 677 aa12.75□□□□□ -0.37
COMMD4-209ENST00000564068 MAP3K10Q02779 954 aa12.75□□□□□ -0.37
COMMD4-209ENST00000564068 DPYSQ14117 519 aa12.75□□□□□ -0.37
COMMD4-209ENST00000564068 DGUOKQ16854 277 aa12.75□□□□□ -0.37
COMMD4-209ENST00000564068 PAGE2BQ5JRK9 111 aa12.75□□□□□ -0.37
COMMD4-209ENST00000564068 SPESP1Q6UW49 350 aa12.75□□□□□ -0.37
COMMD4-209ENST00000564068 ERI1Q8IV48 349 aaKnown RBP12.75□□□□□ -0.37
COMMD4-209ENST00000564068 CENPLQ8N0S6 344 aaPredicted RBP12.75□□□□□ -0.37
COMMD4-209ENST00000564068 POC5Q8NA72 575 aa12.75□□□□□ -0.37
COMMD4-209ENST00000564068 ZFP28Q8NHY6 868 aa12.75□□□□□ -0.37
COMMD4-209ENST00000564068 PCDH19Q8TAB3 1148 aa12.75□□□□□ -0.37
COMMD4-209ENST00000564068 AGAP2Q99490 1192 aa12.75□□□□□ -0.37
COMMD4-209ENST00000564068 IL22Q9GZX6 179 aa12.75□□□□□ -0.37
COMMD4-209ENST00000564068 ITGB1BP2Q9UKP3 347 aa12.75□□□□□ -0.37
COMMD4-209ENST00000564068 BTRCQ9Y297 605 aa12.75□□□□□ -0.37
COMMD4-209ENST00000564068 CAB39Q9Y376 341 aaPredicted RBP12.75□□□□□ -0.37
COMMD4-209ENST00000564068 PDLIM1O00151 329 aa12.75□□□□□ -0.37
COMMD4-209ENST00000564068 WNT10BO00744 389 aa12.75□□□□□ -0.37
COMMD4-209ENST00000564068 BUD23O43709 281 aaKnown RBP12.75□□□□□ -0.37
COMMD4-209ENST00000564068 SYNCRIPO60506 623 aaKnown RBP12.75□□□□□ -0.37
COMMD4-209ENST00000564068 SNAP91O60641 907 aa12.75□□□□□ -0.37
COMMD4-209ENST00000564068 SORBS2O94875 1100 aaKnown RBP12.75□□□□□ -0.37
COMMD4-209ENST00000564068 MRNIPQ6NTE8 343 aa12.75□□□□□ -0.37
COMMD4-209ENST00000564068 C1orf21Q9H246 121 aa12.75□□□□□ -0.37
COMMD4-209ENST00000564068 VPS45Q9NRW7 570 aa12.75□□□□□ -0.37
COMMD4-209ENST00000564068 RAD54BQ9Y620 910 aa12.75□□□□□ -0.37
COMMD4-209ENST00000564068 GAS2O43903 313 aaKnown RBP12.75□□□□□ -0.37
COMMD4-209ENST00000564068 CLASP2O75122 1294 aaKnown RBP12.75□□□□□ -0.37
COMMD4-209ENST00000564068 SEC24AO95486 1093 aa12.75□□□□□ -0.37
COMMD4-209ENST00000564068 CD4P01730 458 aa12.75□□□□□ -0.37
COMMD4-209ENST00000564068 LTFP02788 710 aa12.75□□□□□ -0.37
COMMD4-209ENST00000564068 HGFP14210 728 aa12.75□□□□□ -0.37
COMMD4-209ENST00000564068 MYLK3Q32MK0 819 aa12.75□□□□□ -0.37
COMMD4-209ENST00000564068 RNF19BQ6ZMZ0 732 aa12.75□□□□□ -0.37
COMMD4-209ENST00000564068 ZBED2Q9BTP6 218 aa12.75□□□□□ -0.37
COMMD4-209ENST00000564068 NT5MQ9NPB1 228 aa12.75□□□□□ -0.37
COMMD4-209ENST00000564068 SEMA4BQ9NPR2 832 aaPredicted RBP12.75□□□□□ -0.37
COMMD4-209ENST00000564068 COMMD8Q9NX08 183 aa12.75□□□□□ -0.37
COMMD4-209ENST00000564068 SNTG2Q9NY99 539 aa12.75□□□□□ -0.37
COMMD4-209ENST00000564068 PKP3Q9Y446 797 aa12.75□□□□□ -0.37
COMMD4-209ENST00000564068 TIMM13Q9Y5L4 95 aaPredicted RBP12.75□□□□□ -0.37
COMMD4-209ENST00000564068 YDJCA8MPS7 323 aa12.74□□□□□ -0.37
COMMD4-209ENST00000564068 TOR1BO14657 336 aa12.74□□□□□ -0.37
COMMD4-209ENST00000564068 SPTLC1O15269 473 aa12.74□□□□□ -0.37
COMMD4-209ENST00000564068 CCR1P32246 355 aa12.74□□□□□ -0.37
COMMD4-209ENST00000564068 PPM1FP49593 454 aaPredicted RBP12.74□□□□□ -0.37
COMMD4-209ENST00000564068 ZNF157P51786 506 aaPredicted RBP12.74□□□□□ -0.37
COMMD4-209ENST00000564068 PPP1R26Q5T8A7 1209 aaPredicted RBP12.74□□□□□ -0.37
COMMD4-209ENST00000564068 PRMT9Q6P2P2 845 aa12.74□□□□□ -0.37
COMMD4-209ENST00000564068 POTEHQ6S545 545 aa12.74□□□□□ -0.37
COMMD4-209ENST00000564068 ZNF410Q86VK4 478 aa12.74□□□□□ -0.37
COMMD4-209ENST00000564068 NXNL1Q96CM4 212 aa12.74□□□□□ -0.37
COMMD4-209ENST00000564068 CSPG4P5Q96PW8 444 aa12.74□□□□□ -0.37
COMMD4-209ENST00000564068 RIBC2Q9H4K1 309 aa12.74□□□□□ -0.37
COMMD4-209ENST00000564068 CATSPERBQ9H7T0 1116 aa12.74□□□□□ -0.37
COMMD4-209ENST00000564068 POPDC2Q9HBU9 364 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms