RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 ANO6Q4KMQ2 910 aa10.92□□□□□ -0.66
HDGFL3-204ENST00000563790 TMEM259Q4ZIN3 620 aa10.92□□□□□ -0.66
HDGFL3-204ENST00000563790 DPH6Q7L8W6 267 aa10.92□□□□□ -0.66
HDGFL3-204ENST00000563790 ULK2Q8IYT8 1036 aa10.92□□□□□ -0.66
HDGFL3-204ENST00000563790 KCTD13Q8WZ19 329 aa10.92□□□□□ -0.66
HDGFL3-204ENST00000563790 SEC14L1Q92503 715 aa10.92□□□□□ -0.66
HDGFL3-204ENST00000563790 MBD6Q96DN6 1003 aa10.92□□□□□ -0.66
HDGFL3-204ENST00000563790 KCNK16Q96T55 309 aa10.92□□□□□ -0.66
HDGFL3-204ENST00000563790 NAP1L4Q99733 375 aaKnown RBP10.92□□□□□ -0.66
HDGFL3-204ENST00000563790 CTRCQ99895 268 aa10.92□□□□□ -0.66
HDGFL3-204ENST00000563790 PDE7BQ9NP56 450 aa10.92□□□□□ -0.66
HDGFL3-204ENST00000563790 GPR83Q9NYM4 423 aa10.92□□□□□ -0.66
HDGFL3-204ENST00000563790 SARDHQ9UL12 918 aa10.92□□□□□ -0.66
HDGFL3-204ENST00000563790 USF3Q68DE3 2245 aa10.91□□□□□ -0.66
HDGFL3-204ENST00000563790 TLCD2A6NGC4 264 aa10.91□□□□□ -0.66
HDGFL3-204ENST00000563790 CCL21O00585 134 aa10.91□□□□□ -0.66
HDGFL3-204ENST00000563790 NUDT21O43809 227 aaKnown RBP10.91□□□□□ -0.66
HDGFL3-204ENST00000563790 CLDN14O95500 239 aa10.91□□□□□ -0.66
HDGFL3-204ENST00000563790 PDGFRBP09619 1106 aa10.91□□□□□ -0.66
HDGFL3-204ENST00000563790 MAPTP10636 758 aaKnown RBP10.91□□□□□ -0.66
HDGFL3-204ENST00000563790 THRAP10827 490 aa10.91□□□□□ -0.66
HDGFL3-204ENST00000563790 POLR2BP30876 1174 aaKnown RBP10.91□□□□□ -0.66
HDGFL3-204ENST00000563790 CDSNQ15517 529 aa10.91□□□□□ -0.66
HDGFL3-204ENST00000563790 UGT8Q16880 541 aa10.91□□□□□ -0.66
HDGFL3-204ENST00000563790 PIP5KL1Q5T9C9 394 aa10.91□□□□□ -0.66
HDGFL3-204ENST00000563790 FAM46CQ5VWP2 391 aa10.91□□□□□ -0.66
HDGFL3-204ENST00000563790 DENND1CQ8IV53 801 aa10.91□□□□□ -0.66
HDGFL3-204ENST00000563790 LRRC52Q8N7C0 313 aa10.91□□□□□ -0.66
HDGFL3-204ENST00000563790 TMEM161BQ8NDZ6 487 aa10.91□□□□□ -0.66
HDGFL3-204ENST00000563790 OR4D9Q8NGE8 314 aa10.91□□□□□ -0.66
HDGFL3-204ENST00000563790 WFDC5Q8TCV5 224 aa10.91□□□□□ -0.66
HDGFL3-204ENST00000563790 FAR1Q8WVX9 515 aa10.91□□□□□ -0.66
HDGFL3-204ENST00000563790 COX4I2Q96KJ9 171 aa10.91□□□□□ -0.66
HDGFL3-204ENST00000563790 SPAG5Q96R06 1193 aa10.91□□□□□ -0.66
HDGFL3-204ENST00000563790 SLX1AQ9BQ83 275 aa10.91□□□□□ -0.66
HDGFL3-204ENST00000563790 PLA2G12AQ9BZM1 189 aa10.91□□□□□ -0.66
HDGFL3-204ENST00000563790 ZNF395Q9H8N7 513 aaPredicted RBP10.91□□□□□ -0.66
HDGFL3-204ENST00000563790 C17orf75Q9HAS0 396 aa10.91□□□□□ -0.66
HDGFL3-204ENST00000563790 FBXO8Q9NRD0 319 aa10.91□□□□□ -0.66
HDGFL3-204ENST00000563790 LRIT1Q9P2V4 623 aa10.91□□□□□ -0.66
HDGFL3-204ENST00000563790 NUDT5Q9UKK9 219 aa10.91□□□□□ -0.66
HDGFL3-204ENST00000563790 PCDHGC4Q9Y5F7 938 aa10.91□□□□□ -0.66
HDGFL3-204ENST00000563790 RBM8AQ9Y5S9 174 aaKnown RBP10.91□□□□□ -0.66
HDGFL3-204ENST00000563790 VWFP04275 2813 aa10.91□□□□□ -0.66
HDGFL3-204ENST00000563790 CCDC88CQ9P219 2028 aa10.91□□□□□ -0.66
HDGFL3-204ENST00000563790 ANKRD36A6QL64 1941 aa10.9□□□□□ -0.66
HDGFL3-204ENST00000563790 CCDC196A0A1B0GTZ2 297 aa10.9□□□□□ -0.66
HDGFL3-204ENST00000563790 RAD51BO15315 384 aa10.9□□□□□ -0.66
HDGFL3-204ENST00000563790 SRPRAP08240 638 aaKnown RBP10.9□□□□□ -0.66
HDGFL3-204ENST00000563790 CASP14P31944 242 aa10.9□□□□□ -0.66
HDGFL3-204ENST00000563790 CSKP41240 450 aa10.9□□□□□ -0.66
HDGFL3-204ENST00000563790 PFN3P60673 137 aa10.9□□□□□ -0.66
HDGFL3-204ENST00000563790 COG7P83436 770 aa10.9□□□□□ -0.66
HDGFL3-204ENST00000563790 AKAP17AQ02040 695 aaKnown RBP10.9□□□□□ -0.66
HDGFL3-204ENST00000563790 AMZ1Q400G9 498 aa10.9□□□□□ -0.66
HDGFL3-204ENST00000563790 C10orf120Q5SQS8 335 aa10.9□□□□□ -0.66
HDGFL3-204ENST00000563790 FAXCQ5TGI0 409 aa10.9□□□□□ -0.66
HDGFL3-204ENST00000563790 PLEKHA7Q6IQ23 1121 aa10.9□□□□□ -0.66
HDGFL3-204ENST00000563790 IGFL3Q6UXB1 125 aa10.9□□□□□ -0.66
HDGFL3-204ENST00000563790 CUZD1Q86UP6 607 aa10.9□□□□□ -0.66
HDGFL3-204ENST00000563790 CCDC117Q8IWD4 279 aaPredicted RBP10.9□□□□□ -0.66
HDGFL3-204ENST00000563790 SIMC1Q8NDZ2 872 aa10.9□□□□□ -0.66
HDGFL3-204ENST00000563790 GRHL3Q8TE85 626 aa10.9□□□□□ -0.66
HDGFL3-204ENST00000563790 FBXO44Q9H4M3 255 aa10.9□□□□□ -0.66
HDGFL3-204ENST00000563790 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.9□□□□□ -0.66
HDGFL3-204ENST00000563790 AGAP1Q9UPQ3 857 aa10.9□□□□□ -0.66
HDGFL3-204ENST00000563790 ERVW-1Q9UQF0 538 aa10.9□□□□□ -0.66
HDGFL3-204ENST00000563790 PCM1Q15154 2024 aa10.9□□□□□ -0.66
HDGFL3-204ENST00000563790 A0A0U1RQS6 177 aa10.89□□□□□ -0.67
HDGFL3-204ENST00000563790 F5H423 210 aaPredicted RBP10.89□□□□□ -0.67
HDGFL3-204ENST00000563790 PROM1O43490 865 aa10.89□□□□□ -0.67
HDGFL3-204ENST00000563790 TACC1O75410 805 aa10.89□□□□□ -0.67
HDGFL3-204ENST00000563790 IFNA2P01563 188 aa10.89□□□□□ -0.67
HDGFL3-204ENST00000563790 DNASE1P24855 282 aa10.89□□□□□ -0.67
HDGFL3-204ENST00000563790 HOXC12P31275 282 aa10.89□□□□□ -0.67
HDGFL3-204ENST00000563790 SPAM1P38567 509 aa10.89□□□□□ -0.67
HDGFL3-204ENST00000563790 ZNF445P59923 1031 aa10.89□□□□□ -0.67
HDGFL3-204ENST00000563790 LBRQ14739 615 aaKnown RBP10.89□□□□□ -0.67
HDGFL3-204ENST00000563790 LYPLAL1Q5VWZ2 237 aa10.89□□□□□ -0.67
HDGFL3-204ENST00000563790 SEL1L3Q68CR1 1132 aa10.89□□□□□ -0.67
HDGFL3-204ENST00000563790 OGFOD3Q6PK18 319 aa10.89□□□□□ -0.67
HDGFL3-204ENST00000563790 C16orf47Q6ZP98 133 aaPredicted RBP10.89□□□□□ -0.67
HDGFL3-204ENST00000563790 GKN2Q86XP6 184 aa10.89□□□□□ -0.67
HDGFL3-204ENST00000563790 NT5DC4Q86YG4 428 aa10.89□□□□□ -0.67
HDGFL3-204ENST00000563790 UBR7Q8N806 425 aa10.89□□□□□ -0.67
HDGFL3-204ENST00000563790 SYT2Q8N9I0 419 aaPredicted RBP10.89□□□□□ -0.67
HDGFL3-204ENST00000563790 CXorf38Q8TB03 319 aa10.89□□□□□ -0.67
HDGFL3-204ENST00000563790 LMLNQ96KR4 655 aa10.89□□□□□ -0.67
HDGFL3-204ENST00000563790 AGAP3Q96P47 875 aa10.89□□□□□ -0.67
HDGFL3-204ENST00000563790 MENTQ9BUN1 341 aa10.89□□□□□ -0.67
HDGFL3-204ENST00000563790 RNF26Q9BY78 433 aaPredicted RBP10.89□□□□□ -0.67
HDGFL3-204ENST00000563790 LSG1Q9H089 658 aaKnown RBP10.89□□□□□ -0.67
HDGFL3-204ENST00000563790 STK17AQ9UEE5 414 aa10.89□□□□□ -0.67
HDGFL3-204ENST00000563790 SLCO3A1Q9UIG8 710 aa10.89□□□□□ -0.67
HDGFL3-204ENST00000563790 ANKRD12Q6UB98 2062 aa10.88□□□□□ -0.67
HDGFL3-204ENST00000563790 CLDN5O00501 218 aa10.88□□□□□ -0.67
HDGFL3-204ENST00000563790 PHF1O43189 567 aaPredicted RBP10.88□□□□□ -0.67
HDGFL3-204ENST00000563790 HIP1RO75146 1068 aa10.88□□□□□ -0.67
HDGFL3-204ENST00000563790 WARSP23381 471 aaKnown RBP10.88□□□□□ -0.67
HDGFL3-204ENST00000563790 ADORA2A-AS1P86434 159 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms