RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 LRRC57Q8N9N7 239 aa5.38□□□□□ -1.55
HERPUD1-207ENST00000563781 DNAJB8Q8NHS0 232 aa5.38□□□□□ -1.55
HERPUD1-207ENST00000563781 SH3RF2Q8TEC5 729 aa5.38□□□□□ -1.55
HERPUD1-207ENST00000563781 RNF139Q8WU17 664 aa5.38□□□□□ -1.55
HERPUD1-207ENST00000563781 FAM172AQ8WUF8 416 aa5.38□□□□□ -1.55
HERPUD1-207ENST00000563781 CYB5D2Q8WUJ1 264 aa5.38□□□□□ -1.55
HERPUD1-207ENST00000563781 GOLGA1Q92805 767 aa5.38□□□□□ -1.55
HERPUD1-207ENST00000563781 FGF14Q92915 247 aa5.38□□□□□ -1.55
HERPUD1-207ENST00000563781 SMARCD2Q92925 531 aa5.38□□□□□ -1.55
HERPUD1-207ENST00000563781 P2RY11Q96G91 374 aa5.38□□□□□ -1.55
HERPUD1-207ENST00000563781 SERPINB11Q96P15 392 aa5.38□□□□□ -1.55
HERPUD1-207ENST00000563781 PEBP4Q96S96 227 aa5.38□□□□□ -1.55
HERPUD1-207ENST00000563781 CDK5RAP1Q96SZ6 601 aaKnown RBP5.38□□□□□ -1.55
HERPUD1-207ENST00000563781 CNPY3Q9BT09 278 aa5.38□□□□□ -1.55
HERPUD1-207ENST00000563781 TRIM62Q9BVG3 475 aa5.38□□□□□ -1.55
HERPUD1-207ENST00000563781 SLITRK6Q9H5Y7 841 aa5.38□□□□□ -1.55
HERPUD1-207ENST00000563781 FAM204AQ9H8W3 233 aa5.38□□□□□ -1.55
HERPUD1-207ENST00000563781 LRRC4CQ9HCJ2 640 aa5.38□□□□□ -1.55
HERPUD1-207ENST00000563781 LUC7LQ9NQ29 371 aaKnown RBP5.38□□□□□ -1.55
HERPUD1-207ENST00000563781 CASS4Q9NQ75 786 aa5.38□□□□□ -1.55
HERPUD1-207ENST00000563781 DDIT4Q9NX09 232 aa5.38□□□□□ -1.55
HERPUD1-207ENST00000563781 SMPD4Q9NXE4 827 aa5.38□□□□□ -1.55
HERPUD1-207ENST00000563781 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.38□□□□□ -1.55
HERPUD1-207ENST00000563781 HBS1LQ9Y450 684 aaKnown RBP5.38□□□□□ -1.55
HERPUD1-207ENST00000563781 PAXBP1Q9Y5B6 917 aa5.38□□□□□ -1.55
HERPUD1-207ENST00000563781 CAPN6Q9Y6Q1 641 aa5.38□□□□□ -1.55
HERPUD1-207ENST00000563781 ZFP37Q9Y6Q3 630 aaPredicted RBP5.38□□□□□ -1.55
HERPUD1-207ENST00000563781 U3KQE9 123 aa5.38□□□□□ -1.55
HERPUD1-207ENST00000563781 DENND4AQ7Z401 1863 aa5.38□□□□□ -1.55
HERPUD1-207ENST00000563781 C2orf16Q68DN1 1984 aa5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 DOCK6Q96HP0 2047 aa5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 SYNJ2BP-COX16A0A087WUM0 186 aa5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 TRAV20A0A0B4J274 112 aa5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 A0A1W2PQU0 124 aa5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 TMEM110-MUSTN1A8MSY1 372 aa5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 HEPACAM2A8MVW5 462 aa5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 KCNU1A8MYU2 1149 aa5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 LOC730098B7Z3J9 87 aa5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 MYO1FO00160 1098 aa5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 LEFTY2O00292 366 aa5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 BUB1O43683 1085 aa5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 DNAJC8O75937 253 aaPredicted RBP5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 MOCS3O95396 460 aa5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 CAPNS1P04632 268 aa5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 IRF1P10914 325 aa5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 NAT2P11245 290 aa5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 SP100P23497 879 aaPredicted RBP5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 PSMA2P25787 234 aa5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 IL1R2P27930 398 aa5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 MIPP30301 263 aa5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 CORO1AP31146 461 aaKnown RBP5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 SSTR4P31391 388 aa5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 L1CAMP32004 1257 aa5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 MAN1A1P33908 653 aa5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 RDXP35241 583 aaKnown RBP5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 PCK1P35558 622 aa5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 AVPR1AP37288 418 aa5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 NOP2P46087 812 aaKnown RBP5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 TAS2R40P59535 323 aa5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 SUMO1P63165 101 aaKnown RBP5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 SLC7A5Q01650 507 aa5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 SLC25A11Q02978 314 aaKnown RBP5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 ZP2Q05996 745 aa5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 DEUP1Q05D60 604 aa5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 SCAPQ12770 1279 aa5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 KIF5AQ12840 1032 aa5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 NME3Q13232 169 aa5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 MESDQ14696 234 aa5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 PPP2R5DQ14738 602 aa5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 STAT4Q14765 748 aa5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 CDO1Q16878 200 aa5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 MSMPQ1L6U9 139 aa5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 HS1BP3Q53T59 392 aa5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 BRMS1LQ5PSV4 323 aa5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 TXNRD3NBQ6F5E7 133 aa5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 NADSYN1Q6IA69 706 aa5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 C11orf63Q6NUN7 778 aa5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 CC2D1AQ6P1N0 951 aaPredicted RBP5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 PARM1Q6UWI2 310 aa5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 VITQ6UXI7 678 aa5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 HTR3DQ70Z44 454 aa5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 NLRC3Q7RTR2 1065 aa5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 SLFN11Q7Z7L1 901 aa5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 PCGF5Q86SE9 256 aa5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 CDH24Q86UP0 819 aa5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 ZDHHC14Q8IZN3 488 aa5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 CCAR2Q8N163 923 aaKnown RBP5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 C17orf53Q8N3J3 647 aaPredicted RBP5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 CCDC185Q8N715 623 aa5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 FAM181AQ8N9Y4 354 aa5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 TDRD5Q8NAT2 981 aaKnown RBP5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 BAHD1Q8TBE0 780 aaPredicted RBP5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 KIAA1524Q8TCG1 905 aa5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 CD101Q93033 1021 aa5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 NTAN1Q96AB6 310 aa5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 ELSPBP1Q96BH3 223 aa5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 MYEOVQ96EZ4 313 aa5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 ASIC4Q96FT7 647 aa5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 CCDC74BQ96LY2 380 aa5.37□□□□□ -1.55
HERPUD1-207ENST00000563781 PRMT1Q99873 361 aaKnown RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms