RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 PKNOX1P55347 436 aa10.6□□□□□ -0.71
RNF40-204ENST00000563683 CLDN10P78369 228 aa10.6□□□□□ -0.71
RNF40-204ENST00000563683 TWF1Q12792 350 aa10.6□□□□□ -0.71
RNF40-204ENST00000563683 HSF5Q4G112 596 aaPredicted RBP10.6□□□□□ -0.71
RNF40-204ENST00000563683 MARC1Q5VT66 337 aa10.6□□□□□ -0.71
RNF40-204ENST00000563683 PQLC1Q8N2U9 271 aa10.6□□□□□ -0.71
RNF40-204ENST00000563683 ZFP28Q8NHY6 868 aa10.6□□□□□ -0.71
RNF40-204ENST00000563683 FAM8A1Q9UBU6 413 aa10.6□□□□□ -0.71
RNF40-204ENST00000563683 SFMBT1Q9UHJ3 866 aa10.6□□□□□ -0.71
RNF40-204ENST00000563683 PADI4Q9UM07 663 aa10.6□□□□□ -0.71
RNF40-204ENST00000563683 MYO18AQ92614 2054 aaKnown RBP10.6□□□□□ -0.71
RNF40-204ENST00000563683 SLC12A8A0AV02 714 aa10.6□□□□□ -0.71
RNF40-204ENST00000563683 MYBPHLA2RUH7 354 aa10.6□□□□□ -0.71
RNF40-204ENST00000563683 NCF1BA6NI72 391 aaPredicted RBP10.6□□□□□ -0.71
RNF40-204ENST00000563683 NCF1CA8MVU1 366 aaPredicted RBP10.6□□□□□ -0.71
RNF40-204ENST00000563683 ANGPT2O15123 496 aa10.6□□□□□ -0.71
RNF40-204ENST00000563683 ZNF189O75820 626 aaPredicted RBP10.6□□□□□ -0.71
RNF40-204ENST00000563683 NCF1P14598 390 aaPredicted RBP10.6□□□□□ -0.71
RNF40-204ENST00000563683 EPHA3P29320 983 aa10.6□□□□□ -0.71
RNF40-204ENST00000563683 NPY2RP49146 381 aa10.6□□□□□ -0.71
RNF40-204ENST00000563683 GALK1P51570 392 aa10.6□□□□□ -0.71
RNF40-204ENST00000563683 TLR1Q15399 786 aa10.6□□□□□ -0.71
RNF40-204ENST00000563683 RALGPS1Q5JS13 557 aa10.6□□□□□ -0.71
RNF40-204ENST00000563683 SYPL2Q5VXT5 272 aa10.6□□□□□ -0.71
RNF40-204ENST00000563683 FAM117BQ6P1L5 589 aa10.6□□□□□ -0.71
RNF40-204ENST00000563683 FBXL19Q6PCT2 694 aa10.6□□□□□ -0.71
RNF40-204ENST00000563683 CDRT15Q96T59 188 aa10.6□□□□□ -0.71
RNF40-204ENST00000563683 EGFL8Q99944 293 aa10.6□□□□□ -0.71
RNF40-204ENST00000563683 ZNF358Q9NW07 568 aa10.6□□□□□ -0.71
RNF40-204ENST00000563683 SF3B1O75533 1304 aaKnown RBP eCLIP10.59□□□□□ -0.713e-6■■■■■ 68.4
RNF40-204ENST00000563683 AKAP10O43572 662 aa10.59□□□□□ -0.71
RNF40-204ENST00000563683 C2P06681 752 aa10.59□□□□□ -0.71
RNF40-204ENST00000563683 IQCF3P0C7M6 154 aa10.59□□□□□ -0.71
RNF40-204ENST00000563683 CD151P48509 253 aa10.59□□□□□ -0.71
RNF40-204ENST00000563683 MAXP61244 160 aa10.59□□□□□ -0.71
RNF40-204ENST00000563683 FOXD4Q12950 439 aaPredicted RBP10.59□□□□□ -0.71
RNF40-204ENST00000563683 FAM35AQ86V20 835 aa10.59□□□□□ -0.71
RNF40-204ENST00000563683 ZNF567Q8N184 647 aa10.59□□□□□ -0.71
RNF40-204ENST00000563683 SNRNP27Q8WVK2 155 aaKnown RBP10.59□□□□□ -0.71
RNF40-204ENST00000563683 SDCCAG3Q96C92 435 aa10.59□□□□□ -0.71
RNF40-204ENST00000563683 WDR83Q9BRX9 315 aaKnown RBP10.59□□□□□ -0.71
RNF40-204ENST00000563683 R3HDMLQ9H3Y0 253 aa10.59□□□□□ -0.71
RNF40-204ENST00000563683 CDHR5Q9HBB8 845 aa10.59□□□□□ -0.71
RNF40-204ENST00000563683 NDFIP2Q9NV92 336 aa10.59□□□□□ -0.71
RNF40-204ENST00000563683 CRYL1Q9Y2S2 319 aa10.59□□□□□ -0.71
RNF40-204ENST00000563683 MFHAS1Q9Y4C4 1052 aa10.59□□□□□ -0.71
RNF40-204ENST00000563683 SUPT3HB4E1H0 165 aa10.59□□□□□ -0.71
RNF40-204ENST00000563683 FAM189A1O60320 539 aa10.59□□□□□ -0.71
RNF40-204ENST00000563683 SUPT3HO75486 399 aa10.59□□□□□ -0.71
RNF40-204ENST00000563683 MPOP05164 745 aa10.59□□□□□ -0.71
RNF40-204ENST00000563683 PLIN5Q00G26 463 aa10.59□□□□□ -0.71
RNF40-204ENST00000563683 BTKQ06187 659 aa10.59□□□□□ -0.71
RNF40-204ENST00000563683 OLIG2Q13516 323 aa10.59□□□□□ -0.71
RNF40-204ENST00000563683 MAPRE2Q15555 327 aa10.59□□□□□ -0.71
RNF40-204ENST00000563683 SLC39A12Q504Y0 691 aa10.59□□□□□ -0.71
RNF40-204ENST00000563683 ZFP1Q6P2D0 407 aa10.59□□□□□ -0.71
RNF40-204ENST00000563683 RNF111Q6ZNA4 994 aa10.59□□□□□ -0.71
RNF40-204ENST00000563683 CDHR3Q6ZTQ4 885 aa10.59□□□□□ -0.71
RNF40-204ENST00000563683 OTOP3Q7RTS5 596 aa10.59□□□□□ -0.71
RNF40-204ENST00000563683 CTU1Q7Z7A3 348 aaKnown RBP10.59□□□□□ -0.71
RNF40-204ENST00000563683 KBTBD6Q86V97 674 aa10.59□□□□□ -0.71
RNF40-204ENST00000563683 SLC41A1Q8IVJ1 513 aa10.59□□□□□ -0.71
RNF40-204ENST00000563683 KCTD4Q8WVF5 259 aa10.59□□□□□ -0.71
RNF40-204ENST00000563683 RSPH1Q8WYR4 309 aa10.59□□□□□ -0.71
RNF40-204ENST00000563683 SNX27Q96L92 541 aa10.59□□□□□ -0.71
RNF40-204ENST00000563683 ACE2Q9BYF1 805 aaPredicted RBP10.59□□□□□ -0.71
RNF40-204ENST00000563683 IL22Q9GZX6 179 aa10.59□□□□□ -0.71
RNF40-204ENST00000563683 FAM105AQ9NUU6 356 aa10.59□□□□□ -0.71
RNF40-204ENST00000563683 MPP6Q9NZW5 540 aa10.59□□□□□ -0.71
RNF40-204ENST00000563683 AFF4Q9UHB7 1163 aaKnown RBP10.59□□□□□ -0.71
RNF40-204ENST00000563683 V9GYQ6 96 aa10.59□□□□□ -0.71
RNF40-204ENST00000563683 TAF1LQ8IZX4 1826 aa10.59□□□□□ -0.71
RNF40-204ENST00000563683 SRCAPQ6ZRS2 3230 aa10.59□□□□□ -0.71
RNF40-204ENST00000563683 YJEFN3A6XGL0 299 aa10.59□□□□□ -0.71
RNF40-204ENST00000563683 CHRM3P20309 590 aa10.59□□□□□ -0.71
RNF40-204ENST00000563683 CRHR1P34998 444 aa10.59□□□□□ -0.71
RNF40-204ENST00000563683 PTPN9P43378 593 aa10.59□□□□□ -0.71
RNF40-204ENST00000563683 ESRRGP62508 458 aa10.59□□□□□ -0.71
RNF40-204ENST00000563683 MTA1Q13330 715 aa10.59□□□□□ -0.71
RNF40-204ENST00000563683 LPIN1Q14693 890 aa10.59□□□□□ -0.71
RNF40-204ENST00000563683 ARHGEF6Q15052 776 aa10.59□□□□□ -0.71
RNF40-204ENST00000563683 MYLK3Q32MK0 819 aa10.59□□□□□ -0.71
RNF40-204ENST00000563683 AGKQ53H12 422 aa10.59□□□□□ -0.71
RNF40-204ENST00000563683 BNC2Q6ZN30 1099 aaPredicted RBP10.59□□□□□ -0.71
RNF40-204ENST00000563683 KYQ8NBH2 561 aa10.59□□□□□ -0.71
RNF40-204ENST00000563683 ADCY4Q8NFM4 1077 aa10.59□□□□□ -0.71
RNF40-204ENST00000563683 MYLPFQ96A32 169 aa10.59□□□□□ -0.71
RNF40-204ENST00000563683 CNBD2Q96M20 576 aa10.59□□□□□ -0.71
RNF40-204ENST00000563683 ZMAT2Q96NC0 199 aaKnown RBP10.59□□□□□ -0.71
RNF40-204ENST00000563683 PRPF18Q99633 342 aaKnown RBP10.59□□□□□ -0.71
RNF40-204ENST00000563683 EBF4Q9BQW3 602 aa10.59□□□□□ -0.71
RNF40-204ENST00000563683 COLEC11Q9BWP8 271 aa10.59□□□□□ -0.71
RNF40-204ENST00000563683 WDR55Q9H6Y2 383 aaPredicted RBP10.59□□□□□ -0.71
RNF40-204ENST00000563683 HACD3Q9P035 362 aa10.59□□□□□ -0.71
RNF40-204ENST00000563683 AP4B1Q9Y6B7 739 aa10.59□□□□□ -0.71
RNF40-204ENST00000563683 TEX264Q9Y6I9 313 aa10.59□□□□□ -0.71
RNF40-204ENST00000563683 XIRP1Q702N8 1843 aaKnown RBP10.59□□□□□ -0.71
RNF40-204ENST00000563683 COL2A1P02458 1487 aaPredicted RBP10.59□□□□□ -0.71
RNF40-204ENST00000563683 GSTA4O15217 222 aa10.58□□□□□ -0.71
RNF40-204ENST00000563683 DNAJA2O60884 412 aa10.58□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms