RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 FIZ1Q96SL8 496 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 TXN2Q99757 166 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 MYOCQ99972 504 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 ISCUQ9H1K1 167 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 SH2D4AQ9H788 454 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 BCO1Q9HAY6 547 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 PDE11AQ9HCR9 933 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 CD93Q9NPY3 652 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 TLR9Q9NR96 1032 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 LANCL2Q9NS86 450 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 SPATS2LQ9NUQ6 558 aaKnown RBP5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 KCMF1Q9P0J7 381 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 C6orf203Q9P0P8 240 aaPredicted RBP5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 DNAI1Q9UI46 699 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 ANAPC2Q9UJX6 822 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 INTS6Q9UL03 887 aaKnown RBP5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 NENFQ9UMX5 172 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 ITM2BQ9Y287 266 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 SESN1Q9Y6P5 492 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 CDHR2Q9BYE9 1310 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 ITGB4P16144 1822 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 A0A1W2PQM1 296 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 TRBC2A0A5B9 178 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 GCOM1H8Y6P7 765 aaPredicted RBP5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 ADAMDEC1O15204 470 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 SPRY1O43609 319 aaPredicted RBP5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 CUTAO60888 179 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 SEC14L2O76054 403 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 RECQL5O94762 991 aaPredicted RBP5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 SLCO2B1O94956 709 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 PENKP01210 267 aaPredicted RBP5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 YY1P25490 414 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 CASP3P42574 277 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 TXKP42681 527 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 KCNJ4P48050 445 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 ARCN1P48444 511 aaKnown RBP5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 STAT2P52630 851 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 OXCT1P55809 520 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 YPEL5P62699 121 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 TRA2BP62995 288 aaKnown RBP5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 PPATQ06203 517 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 SCN1BQ07699 218 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 ALCAMQ13740 583 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 HYAL4Q2M3T9 481 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 CRY2Q49AN0 593 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 USP39Q53GS9 565 aaKnown RBP5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 PLA1AQ53H76 456 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 HSP90AA5PQ58FG0 334 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 CAVIN4Q5BKX8 364 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 SPDYAQ5MJ70 313 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 CDKAL1Q5VV42 579 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 TMEM154Q6P9G4 183 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 MAMDC4Q6UXC1 1216 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 RUFY3Q7L099 469 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 BMP8AQ7Z5Y6 402 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 FAM160B2Q86V87 743 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 HOOK3Q86VS8 718 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 TRIM48Q8IWZ4 208 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 FAM185AQ8N0U4 392 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 MB21D1Q8N884 522 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 MRPL43Q8N983 215 aaKnown RBP5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 CDCA5Q96FF9 252 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 LINC00615Q96LM1 132 aaPredicted RBP5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 NEK1Q96PY6 1258 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 SH3GL2Q99962 352 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 CCDC106Q9BWC9 280 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 HAPLN2Q9GZV7 340 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 TTC12Q9H892 705 aaPredicted RBP5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 BARX1Q9HBU1 254 aaPredicted RBP5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 PAK6Q9NQU5 681 aaPredicted RBP5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 SLC35D1Q9NTN3 355 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 LIN7CQ9NUP9 197 aaKnown RBP5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 TMEM140Q9NV12 185 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 MRPS18AQ9NVS2 196 aaKnown RBP5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 FBXO34Q9NWN3 711 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 AIPL1Q9NZN9 384 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 CNIH4Q9P003 139 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 MKLN1Q9UL63 735 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 CLDN16Q9Y5I7 305 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 CLCA3PQ9Y6N3 262 aa5.38□□□□□ -1.55
VPS35P1-201ENST00000563400 C5P01031 1676 aa5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 ADAMTS7Q9UKP4 1686 aa5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 C4BP0C0L5 1744 aa5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 SLC38A8A6NNN8 435 aa5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 GPR89AB7ZAQ6 455 aa5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 M0QYG6 137 aa5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 POLRMTO00411 1230 aaKnown RBP5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 BIN1O00499 593 aa5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 SEPT4O43236 478 aa5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 CA12O43570 354 aa5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 CCNT2O60583 730 aaKnown RBP5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 PTBP3O95758 552 aaKnown RBP5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 RB1P06400 928 aa5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 GPR89BP0CG08 455 aa5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 ACP5P13686 325 aa5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 AGAP20933 346 aa5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 KCNA5P22460 613 aa5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 GPTP24298 496 aa5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 APEX1P27695 318 aaKnown RBP5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 GDI1P31150 447 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms