RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 RFTN1Q14699 578 aaPredicted RBP9.88□□□□□ -0.83
UBFD1-202ENST00000563366 KCTD19Q17RG1 926 aaPredicted RBP9.88□□□□□ -0.83
UBFD1-202ENST00000563366 FNBP1LQ5T0N5 605 aa9.88□□□□□ -0.83
UBFD1-202ENST00000563366 FAXCQ5TGI0 409 aa9.88□□□□□ -0.83
UBFD1-202ENST00000563366 MARC1Q5VT66 337 aa9.88□□□□□ -0.83
UBFD1-202ENST00000563366 NADSYN1Q6IA69 706 aa9.88□□□□□ -0.83
UBFD1-202ENST00000563366 GAREM2Q75VX8 874 aa9.88□□□□□ -0.83
UBFD1-202ENST00000563366 ZNF354CQ86Y25 554 aa9.88□□□□□ -0.83
UBFD1-202ENST00000563366 TDRPQ86YL5 185 aa9.88□□□□□ -0.83
UBFD1-202ENST00000563366 CPXM2Q8N436 756 aa9.88□□□□□ -0.83
UBFD1-202ENST00000563366 TAB3Q8N5C8 712 aaPredicted RBP9.88□□□□□ -0.83
UBFD1-202ENST00000563366 CCDC33Q8N5R6 958 aa9.88□□□□□ -0.83
UBFD1-202ENST00000563366 FBXO36Q8NEA4 188 aa9.88□□□□□ -0.83
UBFD1-202ENST00000563366 OR2W6PQ8NHA6 318 aa9.88□□□□□ -0.83
UBFD1-202ENST00000563366 IGSF8Q969P0 613 aa9.88□□□□□ -0.83
UBFD1-202ENST00000563366 MYO19Q96H55 970 aa9.88□□□□□ -0.83
UBFD1-202ENST00000563366 AGAP3Q96P47 875 aa9.88□□□□□ -0.83
UBFD1-202ENST00000563366 FCRL5Q96RD9 977 aa9.88□□□□□ -0.83
UBFD1-202ENST00000563366 CYTH2Q99418 400 aa9.88□□□□□ -0.83
UBFD1-202ENST00000563366 CORO1BQ9BR76 489 aa9.88□□□□□ -0.83
UBFD1-202ENST00000563366 LRRC3Q9BY71 257 aa9.88□□□□□ -0.83
UBFD1-202ENST00000563366 RNF38Q9H0F5 515 aa9.88□□□□□ -0.83
UBFD1-202ENST00000563366 ATXN3LQ9H3M9 355 aa9.88□□□□□ -0.83
UBFD1-202ENST00000563366 LRRC4CQ9HCJ2 640 aa9.88□□□□□ -0.83
UBFD1-202ENST00000563366 VPS45Q9NRW7 570 aa9.88□□□□□ -0.83
UBFD1-202ENST00000563366 DNAJC17Q9NVM6 304 aaKnown RBP9.88□□□□□ -0.83
UBFD1-202ENST00000563366 SENP1Q9P0U3 644 aa9.88□□□□□ -0.83
UBFD1-202ENST00000563366 SAMD15Q9P1V8 674 aa9.88□□□□□ -0.83
UBFD1-202ENST00000563366 ZNF212Q9UDV6 495 aa9.88□□□□□ -0.83
UBFD1-202ENST00000563366 AGO1Q9UL18 857 aaKnown RBP9.88□□□□□ -0.83
UBFD1-202ENST00000563366 CPQQ9Y646 472 aa9.88□□□□□ -0.83
UBFD1-202ENST00000563366 ATG2AQ2TAZ0 1938 aa9.88□□□□□ -0.83
UBFD1-202ENST00000563366 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.87□□□□□ -0.83
UBFD1-202ENST00000563366 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.87□□□□□ -0.83
UBFD1-202ENST00000563366 TCRBV7S3A2A0A539 114 aa9.87□□□□□ -0.83
UBFD1-202ENST00000563366 MAGEB16A2A368 324 aa9.87□□□□□ -0.83
UBFD1-202ENST00000563366 SDR42E2A6NKP2 422 aa9.87□□□□□ -0.83
UBFD1-202ENST00000563366 FIGNL2A6NMB9 653 aa9.87□□□□□ -0.83
UBFD1-202ENST00000563366 TRDMT1O14717 391 aaKnown RBP9.87□□□□□ -0.83
UBFD1-202ENST00000563366 GRM6O15303 877 aa9.87□□□□□ -0.83
UBFD1-202ENST00000563366 POLR3GO15318 223 aaPredicted RBP9.87□□□□□ -0.83
UBFD1-202ENST00000563366 CACNG3O60359 315 aa9.87□□□□□ -0.83
UBFD1-202ENST00000563366 CNTN5O94779 1100 aa9.87□□□□□ -0.83
UBFD1-202ENST00000563366 SHBGP04278 402 aa9.87□□□□□ -0.83
UBFD1-202ENST00000563366 RHOCP08134 193 aa9.87□□□□□ -0.83
UBFD1-202ENST00000563366 IRF1P10914 325 aa9.87□□□□□ -0.83
UBFD1-202ENST00000563366 MYL4P12829 197 aa9.87□□□□□ -0.83
UBFD1-202ENST00000563366 NFKB1P19838 968 aa9.87□□□□□ -0.83
UBFD1-202ENST00000563366 DNAJB1P25685 340 aa9.87□□□□□ -0.83
UBFD1-202ENST00000563366 ELK3P41970 407 aa9.87□□□□□ -0.83
UBFD1-202ENST00000563366 MMP13P45452 471 aa9.87□□□□□ -0.83
UBFD1-202ENST00000563366 CBX1P83916 185 aa9.87□□□□□ -0.83
UBFD1-202ENST00000563366 GNA12Q03113 381 aa9.87□□□□□ -0.83
UBFD1-202ENST00000563366 GABPB1Q06547 395 aaPredicted RBP9.87□□□□□ -0.83
UBFD1-202ENST00000563366 CDH17Q12864 832 aa9.87□□□□□ -0.83
UBFD1-202ENST00000563366 ZBTB17Q13105 803 aa9.87□□□□□ -0.83
UBFD1-202ENST00000563366 MPP3Q13368 585 aa9.87□□□□□ -0.83
UBFD1-202ENST00000563366 SERINC3Q13530 473 aa9.87□□□□□ -0.83
UBFD1-202ENST00000563366 SHHQ15465 462 aa9.87□□□□□ -0.83
UBFD1-202ENST00000563366 ALFQ53S48 1182 aa9.87□□□□□ -0.83
UBFD1-202ENST00000563366 TTMPQ5BVD1 217 aa9.87□□□□□ -0.83
UBFD1-202ENST00000563366 C9orf50Q5SZB4 431 aa9.87□□□□□ -0.83
UBFD1-202ENST00000563366 MPP7Q5T2T1 576 aa9.87□□□□□ -0.83
UBFD1-202ENST00000563366 ARTNQ5T4W7 220 aa9.87□□□□□ -0.83
UBFD1-202ENST00000563366 TXNDC8Q6A555 127 aa9.87□□□□□ -0.83
UBFD1-202ENST00000563366 ZNF449Q6P9G9 518 aa9.87□□□□□ -0.83
UBFD1-202ENST00000563366 C3orf62Q6ZUJ4 267 aa9.87□□□□□ -0.83
UBFD1-202ENST00000563366 HTR3DQ70Z44 454 aa9.87□□□□□ -0.83
UBFD1-202ENST00000563366 CAND1Q86VP6 1230 aaKnown RBP9.87□□□□□ -0.83
UBFD1-202ENST00000563366 FAM217AQ8IXS0 508 aa9.87□□□□□ -0.83
UBFD1-202ENST00000563366 KLHDC8BQ8IXV7 354 aa9.87□□□□□ -0.83
UBFD1-202ENST00000563366 KIAA1958Q8N8K9 716 aa9.87□□□□□ -0.83
UBFD1-202ENST00000563366 ARL14EPQ8N8R7 260 aaPredicted RBP9.87□□□□□ -0.83
UBFD1-202ENST00000563366 HMCESQ96FZ2 354 aa9.87□□□□□ -0.83
UBFD1-202ENST00000563366 ABHD8Q96I13 439 aa9.87□□□□□ -0.83
UBFD1-202ENST00000563366 CDCA3Q99618 268 aaPredicted RBP9.87□□□□□ -0.83
UBFD1-202ENST00000563366 ACSS3Q9H6R3 686 aa9.87□□□□□ -0.83
UBFD1-202ENST00000563366 CNOT10Q9H9A5 744 aaKnown RBP9.87□□□□□ -0.83
UBFD1-202ENST00000563366 NDFIP2Q9NV92 336 aa9.87□□□□□ -0.83
UBFD1-202ENST00000563366 BFARQ9NZS9 450 aa9.87□□□□□ -0.83
UBFD1-202ENST00000563366 ZC3H7BQ9UGR2 993 aaKnown RBP9.87□□□□□ -0.83
UBFD1-202ENST00000563366 LGALS13Q9UHV8 139 aa9.87□□□□□ -0.83
UBFD1-202ENST00000563366 ARHGAP26Q9UNA1 814 aa9.87□□□□□ -0.83
UBFD1-202ENST00000563366 CHMP2BQ9UQN3 213 aa9.87□□□□□ -0.83
UBFD1-202ENST00000563366 TBC1D30Q9Y2I9 924 aa9.87□□□□□ -0.83
UBFD1-202ENST00000563366 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.87□□□□□ -0.83
UBFD1-202ENST00000563366 IKBKGQ9Y6K9 419 aa9.87□□□□□ -0.83
UBFD1-202ENST00000563366 ZFP37Q9Y6Q3 630 aaPredicted RBP9.87□□□□□ -0.83
UBFD1-202ENST00000563366 CXorf51AA0A1B0GTR3 108 aa9.86□□□□□ -0.83
UBFD1-202ENST00000563366 E2F8A0AVK6 867 aa9.86□□□□□ -0.83
UBFD1-202ENST00000563366 TLDC2A0PJX2 215 aa9.86□□□□□ -0.83
UBFD1-202ENST00000563366 CCL16O15467 120 aa9.86□□□□□ -0.83
UBFD1-202ENST00000563366 PRAMEF11O60813 436 aa9.86□□□□□ -0.83
UBFD1-202ENST00000563366 CLASP2O75122 1294 aaKnown RBP9.86□□□□□ -0.83
UBFD1-202ENST00000563366 KLKB1P03952 638 aa9.86□□□□□ -0.83
UBFD1-202ENST00000563366 CYBBP04839 570 aa9.86□□□□□ -0.83
UBFD1-202ENST00000563366 POLBP06746 335 aa9.86□□□□□ -0.83
UBFD1-202ENST00000563366 NR1D1P20393 614 aa9.86□□□□□ -0.83
UBFD1-202ENST00000563366 CES1P23141 567 aa9.86□□□□□ -0.83
UBFD1-202ENST00000563366 SLC6A4P31645 630 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms