RNA–Protein interactions for RNA: ENST00000563218.5

SPG7-207, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-207ENST00000563218 TRIM58Q8NG06 486 aa13.7□□□□□ -0.22
SPG7-207ENST00000563218 FRS2Q8WU20 508 aa13.7□□□□□ -0.22
SPG7-207ENST00000563218 RFFLQ8WZ73 363 aa13.7□□□□□ -0.22
SPG7-207ENST00000563218 TSC1Q92574 1164 aa13.7□□□□□ -0.22
SPG7-207ENST00000563218 PRMT1Q99873 361 aaKnown RBP13.7□□□□□ -0.22
SPG7-207ENST00000563218 DDX50Q9BQ39 737 aaKnown RBP13.7□□□□□ -0.22
SPG7-207ENST00000563218 GDF3Q9NR23 364 aa13.7□□□□□ -0.22
SPG7-207ENST00000563218 PCDHGA1Q9Y5H4 931 aa13.7□□□□□ -0.22
SPG7-207ENST00000563218 RAI2Q9Y5P3 530 aa13.7□□□□□ -0.22
SPG7-207ENST00000563218 HELZ2Q9BYK8 2649 aaKnown RBP13.7□□□□□ -0.22
SPG7-207ENST00000563218 SYNJ2BP-COX16A0A087WUM0 186 aa13.69□□□□□ -0.22
SPG7-207ENST00000563218 FAM170AA1A519 330 aa13.69□□□□□ -0.22
SPG7-207ENST00000563218 TLR4O00206 839 aa13.69□□□□□ -0.22
SPG7-207ENST00000563218 RNF103O00237 685 aa13.69□□□□□ -0.22
SPG7-207ENST00000563218 LATO43561 262 aa13.69□□□□□ -0.22
SPG7-207ENST00000563218 BUB1O43683 1085 aa13.69□□□□□ -0.22
SPG7-207ENST00000563218 DFNA5O60443 496 aa13.69□□□□□ -0.22
SPG7-207ENST00000563218 TRUB2O95900 331 aaKnown RBP13.69□□□□□ -0.22
SPG7-207ENST00000563218 APOEP02649 317 aa13.69□□□□□ -0.22
SPG7-207ENST00000563218 MYBL1P10243 752 aa13.69□□□□□ -0.22
SPG7-207ENST00000563218 C5AR1P21730 350 aa13.69□□□□□ -0.22
SPG7-207ENST00000563218 EIF4EBP2Q13542 120 aaPredicted RBP13.69□□□□□ -0.22
SPG7-207ENST00000563218 AGBL4Q5VU57 503 aa13.69□□□□□ -0.22
SPG7-207ENST00000563218 RNF219Q5W0B1 726 aaPredicted RBP13.69□□□□□ -0.22
SPG7-207ENST00000563218 RHOT2Q8IXI1 618 aa13.69□□□□□ -0.22
SPG7-207ENST00000563218 CPA5Q8WXQ8 436 aa13.69□□□□□ -0.22
SPG7-207ENST00000563218 FAM131CQ96AQ9 280 aa13.69□□□□□ -0.22
SPG7-207ENST00000563218 ZNF653Q96CK0 615 aa13.69□□□□□ -0.22
SPG7-207ENST00000563218 NXPE2Q96DL1 559 aa13.69□□□□□ -0.22
SPG7-207ENST00000563218 WDR24Q96S15 920 aa13.69□□□□□ -0.22
SPG7-207ENST00000563218 MYOCQ99972 504 aa13.69□□□□□ -0.22
SPG7-207ENST00000563218 THAP2Q9H0W7 228 aa13.69□□□□□ -0.22
SPG7-207ENST00000563218 COX16Q9P0S2 106 aa13.69□□□□□ -0.22
SPG7-207ENST00000563218 TBC1D3DA0A087WVF3 549 aa13.68□□□□□ -0.22
SPG7-207ENST00000563218 TBC1D3IA0A087WXS9 549 aa13.68□□□□□ -0.22
SPG7-207ENST00000563218 TBC1D3EA0A087X179 549 aa13.68□□□□□ -0.22
SPG7-207ENST00000563218 TBC1D3KA0A087X1G2 549 aa13.68□□□□□ -0.22
SPG7-207ENST00000563218 CTAGE9A4FU28 777 aa13.68□□□□□ -0.22
SPG7-207ENST00000563218 TBC1D3FA6NER0 549 aaPredicted RBP13.68□□□□□ -0.22
SPG7-207ENST00000563218 TBC1D3LB9A6J9 549 aa13.68□□□□□ -0.22
SPG7-207ENST00000563218 F5H5T6 163 aa13.68□□□□□ -0.22
SPG7-207ENST00000563218 TBC1D3HP0C7X1 549 aa13.68□□□□□ -0.22
SPG7-207ENST00000563218 HNF1BP35680 557 aa13.68□□□□□ -0.22
SPG7-207ENST00000563218 EIF2S3P41091 472 aaKnown RBP13.68□□□□□ -0.22
SPG7-207ENST00000563218 CNTN1Q12860 1018 aa13.68□□□□□ -0.22
SPG7-207ENST00000563218 C6orf118Q5T5N4 469 aa13.68□□□□□ -0.22
SPG7-207ENST00000563218 TBC1D3GQ6DHY5 549 aa13.68□□□□□ -0.22
SPG7-207ENST00000563218 TBC1D3CQ6IPX1 549 aa13.68□□□□□ -0.22
SPG7-207ENST00000563218 NAPEPLDQ6IQ20 393 aa13.68□□□□□ -0.22
SPG7-207ENST00000563218 Q6ZVU0 165 aa13.68□□□□□ -0.22
SPG7-207ENST00000563218 PHF13Q86YI8 300 aaPredicted RBP13.68□□□□□ -0.22
SPG7-207ENST00000563218 MCOLN2Q8IZK6 566 aa13.68□□□□□ -0.22
SPG7-207ENST00000563218 TBC1D3Q8IZP1 549 aaPredicted RBP13.68□□□□□ -0.22
SPG7-207ENST00000563218 MSANTD4Q8NCY6 345 aa13.68□□□□□ -0.22
SPG7-207ENST00000563218 KLK6Q92876 244 aa13.68□□□□□ -0.22
SPG7-207ENST00000563218 ARHGEF26Q96DR7 871 aa13.68□□□□□ -0.22
SPG7-207ENST00000563218 ALG14Q96F25 216 aa13.68□□□□□ -0.22
SPG7-207ENST00000563218 VCPIP1Q96JH7 1222 aa13.68□□□□□ -0.22
SPG7-207ENST00000563218 BTN2A3PQ96KV6 586 aa13.68□□□□□ -0.22
SPG7-207ENST00000563218 CALR3Q96L12 384 aaKnown RBP13.68□□□□□ -0.22
SPG7-207ENST00000563218 SLC4A5Q9BY07 1137 aa13.68□□□□□ -0.22
SPG7-207ENST00000563218 PRORYQ9H606 182 aa13.68□□□□□ -0.22
SPG7-207ENST00000563218 ASH1LQ9NR48 2969 aaKnown RBP13.68□□□□□ -0.22
SPG7-207ENST00000563218 SALL4Q9UJQ4 1053 aa13.68□□□□□ -0.22
SPG7-207ENST00000563218 AK5Q9Y6K8 562 aa13.68□□□□□ -0.22
SPG7-207ENST00000563218 RP1P56715 2156 aa13.68□□□□□ -0.22
SPG7-207ENST00000563218 KCNU1A8MYU2 1149 aa13.67□□□□□ -0.22
SPG7-207ENST00000563218 E9PAM4 449 aa13.67□□□□□ -0.22
SPG7-207ENST00000563218 CAPN9O14815 690 aa13.67□□□□□ -0.22
SPG7-207ENST00000563218 PLRG1O43660 514 aaKnown RBP13.67□□□□□ -0.22
SPG7-207ENST00000563218 BRINP1O60477 761 aa13.67□□□□□ -0.22
SPG7-207ENST00000563218 CYP1A2P05177 515 aa13.67□□□□□ -0.22
SPG7-207ENST00000563218 CTSLP07711 333 aa13.67□□□□□ -0.22
SPG7-207ENST00000563218 CDH5P33151 784 aaPredicted RBP13.67□□□□□ -0.22
SPG7-207ENST00000563218 RXRGP48443 463 aa13.67□□□□□ -0.22
SPG7-207ENST00000563218 TAS2R38P59533 333 aa13.67□□□□□ -0.22
SPG7-207ENST00000563218 INSM1Q01101 510 aaPredicted RBP13.67□□□□□ -0.22
SPG7-207ENST00000563218 C1QBPQ07021 282 aaKnown RBP13.67□□□□□ -0.22
SPG7-207ENST00000563218 SFSWAPQ12872 951 aaKnown RBP13.67□□□□□ -0.22
SPG7-207ENST00000563218 ELAVL3Q14576 367 aaKnown RBP13.67□□□□□ -0.22
SPG7-207ENST00000563218 FBXL22Q6P050 247 aa13.67□□□□□ -0.22
SPG7-207ENST00000563218 CCDC117Q8IWD4 279 aaPredicted RBP13.67□□□□□ -0.22
SPG7-207ENST00000563218 DEFB106AQ8N104 65 aa13.67□□□□□ -0.22
SPG7-207ENST00000563218 C1orf131Q8NDD1 294 aaKnown RBP13.67□□□□□ -0.22
SPG7-207ENST00000563218 SLC35G2Q8TBE7 412 aa13.67□□□□□ -0.22
SPG7-207ENST00000563218 SKA1Q96BD8 255 aa13.67□□□□□ -0.22
SPG7-207ENST00000563218 NAPGQ99747 312 aaPredicted RBP13.67□□□□□ -0.22
SPG7-207ENST00000563218 C11orf70Q9BRQ4 267 aa13.67□□□□□ -0.22
SPG7-207ENST00000563218 FAM204AQ9H8W3 233 aa13.67□□□□□ -0.22
SPG7-207ENST00000563218 POPDC2Q9HBU9 364 aa13.67□□□□□ -0.22
SPG7-207ENST00000563218 FZD3Q9NPG1 666 aa13.67□□□□□ -0.22
SPG7-207ENST00000563218 ADAM22Q9P0K1 906 aa13.67□□□□□ -0.22
SPG7-207ENST00000563218 CTTNBP2NLQ9P2B4 639 aa13.67□□□□□ -0.22
SPG7-207ENST00000563218 CNOT8Q9UFF9 292 aaKnown RBP13.67□□□□□ -0.22
SPG7-207ENST00000563218 CAPN6Q9Y6Q1 641 aa13.67□□□□□ -0.22
SPG7-207ENST00000563218 CFAP46Q8IYW2 2715 aa13.67□□□□□ -0.22
SPG7-207ENST00000563218 ANKRD36A6QL64 1941 aa13.66□□□□□ -0.22
SPG7-207ENST00000563218 LRP4O75096 1905 aa13.66□□□□□ -0.22
SPG7-207ENST00000563218 MAST4O15021 2626 aa13.66□□□□□ -0.22
SPG7-207ENST00000563218 TRIM38O00635 465 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms