RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, humanhuman

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-208ENST00000563092 FUCA2Q9BTY2 467 aa8.51□□□□□ -1.05
CKLF-208ENST00000563092 TRIM62Q9BVG3 475 aa8.51□□□□□ -1.05
CKLF-208ENST00000563092 C1QTNF2Q9BXJ5 285 aa8.51□□□□□ -1.05
CKLF-208ENST00000563092 SLC17A9Q9BYT1 436 aa8.51□□□□□ -1.05
CKLF-208ENST00000563092 SLC25A13Q9UJS0 675 aa8.51□□□□□ -1.05
CKLF-208ENST00000563092 PNMA8BQ9ULN7 279 aaPredicted RBP8.51□□□□□ -1.05
CKLF-208ENST00000563092 CNTN6Q9UQ52 1028 aa8.51□□□□□ -1.05
CKLF-208ENST00000563092 MAPK8IP1Q9UQF2 711 aa8.51□□□□□ -1.05
CKLF-208ENST00000563092 AHCTF1Q8WYP5 2266 aa8.51□□□□□ -1.05
CKLF-208ENST00000563092 DOPEY2Q9Y3R5 2298 aa8.5□□□□□ -1.05
CKLF-208ENST00000563092 USP9XQ93008 2570 aaPredicted RBP8.5□□□□□ -1.05
CKLF-208ENST00000563092 K7ERQ8 282 aa8.5□□□□□ -1.05
CKLF-208ENST00000563092 M0QYV0 167 aa8.5□□□□□ -1.05
CKLF-208ENST00000563092 NVLO15381 856 aaKnown RBP8.5□□□□□ -1.05
CKLF-208ENST00000563092 SLC16A3O15427 465 aaKnown RBP8.5□□□□□ -1.05
CKLF-208ENST00000563092 SMAD6O43541 496 aaKnown RBP8.5□□□□□ -1.05
CKLF-208ENST00000563092 CLDN11O75508 207 aa8.5□□□□□ -1.05
CKLF-208ENST00000563092 GJB6O95452 261 aa8.5□□□□□ -1.05
CKLF-208ENST00000563092 S1PR4O95977 384 aa8.5□□□□□ -1.05
CKLF-208ENST00000563092 PRNPP04156 253 aa8.5□□□□□ -1.05
CKLF-208ENST00000563092 FAM87AP0C7U9 286 aa8.5□□□□□ -1.05
CKLF-208ENST00000563092 SLC2A3P11169 496 aa8.5□□□□□ -1.05
CKLF-208ENST00000563092 PFKFB1P16118 471 aa8.5□□□□□ -1.05
CKLF-208ENST00000563092 CMA1P23946 247 aa8.5□□□□□ -1.05
CKLF-208ENST00000563092 BRD2P25440 801 aaKnown RBP8.5□□□□□ -1.05
CKLF-208ENST00000563092 CCKBRP32239 447 aa8.5□□□□□ -1.05
CKLF-208ENST00000563092 NUMBP49757 651 aa8.5□□□□□ -1.05
CKLF-208ENST00000563092 YWHAZP63104 245 aaKnown RBP8.5□□□□□ -1.05
CKLF-208ENST00000563092 RPS21P63220 83 aaKnown RBP8.5□□□□□ -1.05
CKLF-208ENST00000563092 PRR20EP86478 221 aa8.5□□□□□ -1.05
CKLF-208ENST00000563092 PRR20CP86479 221 aa8.5□□□□□ -1.05
CKLF-208ENST00000563092 PRR20DP86480 221 aa8.5□□□□□ -1.05
CKLF-208ENST00000563092 PRR20BP86481 221 aa8.5□□□□□ -1.05
CKLF-208ENST00000563092 PRR20AP86496 221 aa8.5□□□□□ -1.05
CKLF-208ENST00000563092 CENPCQ03188 943 aa8.5□□□□□ -1.05
CKLF-208ENST00000563092 SRSF6Q13247 344 aaKnown RBP8.5□□□□□ -1.05
CKLF-208ENST00000563092 MTA1Q13330 715 aa8.5□□□□□ -1.05
CKLF-208ENST00000563092 AUHQ13825 339 aaKnown RBP8.5□□□□□ -1.05
CKLF-208ENST00000563092 UBAP2LQ14157 1087 aaKnown RBP8.5□□□□□ -1.05
CKLF-208ENST00000563092 DRAP1Q14919 205 aaPredicted RBP8.5□□□□□ -1.05
CKLF-208ENST00000563092 TGIF1Q15583 401 aa8.5□□□□□ -1.05
CKLF-208ENST00000563092 TBR1Q16650 682 aa8.5□□□□□ -1.05
CKLF-208ENST00000563092 DEFB133Q30KQ1 61 aa8.5□□□□□ -1.05
CKLF-208ENST00000563092 ACCSLQ4AC99 568 aa8.5□□□□□ -1.05
CKLF-208ENST00000563092 RABGAP1LQ5R372 815 aa8.5□□□□□ -1.05
CKLF-208ENST00000563092 TMEM270Q6UE05 265 aa8.5□□□□□ -1.05
CKLF-208ENST00000563092 USP53Q70EK8 1073 aa8.5□□□□□ -1.05
CKLF-208ENST00000563092 PTAR1Q7Z6K3 402 aaPredicted RBP8.5□□□□□ -1.05
CKLF-208ENST00000563092 B3GNT8Q7Z7M8 397 aa8.5□□□□□ -1.05
CKLF-208ENST00000563092 C14orf80Q86SX3 495 aa8.5□□□□□ -1.05
CKLF-208ENST00000563092 DTX1Q86Y01 620 aa8.5□□□□□ -1.05
CKLF-208ENST00000563092 ZNF683Q8IZ20 524 aa8.5□□□□□ -1.05
CKLF-208ENST00000563092 ATP6V0D2Q8N8Y2 350 aa8.5□□□□□ -1.05
CKLF-208ENST00000563092 CHST14Q8NCH0 376 aa8.5□□□□□ -1.05
CKLF-208ENST00000563092 SLC2A13Q96QE2 648 aa8.5□□□□□ -1.05
CKLF-208ENST00000563092 MIS12Q9H081 205 aa8.5□□□□□ -1.05
CKLF-208ENST00000563092 UPF2Q9HAU5 1272 aaKnown RBP8.5□□□□□ -1.05
CKLF-208ENST00000563092 POPDC2Q9HBU9 364 aa8.5□□□□□ -1.05
CKLF-208ENST00000563092 GEMIN8Q9NWZ8 242 aaKnown RBP8.5□□□□□ -1.05
CKLF-208ENST00000563092 FADS3Q9Y5Q0 445 aa8.5□□□□□ -1.05
CKLF-208ENST00000563092 WASF2Q9Y6W5 498 aa8.5□□□□□ -1.05
CKLF-208ENST00000563092 MYO9AB2RTY4 2548 aa8.5□□□□□ -1.05
CKLF-208ENST00000563092 SPENQ96T58 3664 aaKnown RBP8.5□□□□□ -1.05
CKLF-208ENST00000563092 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.49□□□□□ -1.05
CKLF-208ENST00000563092 KPNA3O00505 521 aaPredicted RBP8.49□□□□□ -1.05
CKLF-208ENST00000563092 MUSKO15146 869 aa8.49□□□□□ -1.05
CKLF-208ENST00000563092 CETN3O15182 167 aa8.49□□□□□ -1.05
CKLF-208ENST00000563092 PAK4O96013 591 aaPredicted RBP8.49□□□□□ -1.05
CKLF-208ENST00000563092 CALCAP01258 141 aa8.49□□□□□ -1.05
CKLF-208ENST00000563092 CENPBP07199 599 aaPredicted RBP8.49□□□□□ -1.05
CKLF-208ENST00000563092 LIPCP11150 499 aa8.49□□□□□ -1.05
CKLF-208ENST00000563092 EPB41P11171 864 aaKnown RBP8.49□□□□□ -1.05
CKLF-208ENST00000563092 ADRB3P13945 408 aa8.49□□□□□ -1.05
CKLF-208ENST00000563092 ZNF18P17022 549 aa8.49□□□□□ -1.05
CKLF-208ENST00000563092 JUNDP17535 347 aa8.49□□□□□ -1.05
CKLF-208ENST00000563092 WT1P19544 449 aaPredicted RBP8.49□□□□□ -1.05
CKLF-208ENST00000563092 CR2P20023 1033 aa8.49□□□□□ -1.05
CKLF-208ENST00000563092 ITGB7P26010 798 aa8.49□□□□□ -1.05
CKLF-208ENST00000563092 CCR1P32246 355 aa8.49□□□□□ -1.05
CKLF-208ENST00000563092 UGT1A5P35504 534 aa8.49□□□□□ -1.05
CKLF-208ENST00000563092 ACADSBP45954 432 aa8.49□□□□□ -1.05
CKLF-208ENST00000563092 RPIAP49247 311 aa8.49□□□□□ -1.05
CKLF-208ENST00000563092 NUCB2P80303 420 aa8.49□□□□□ -1.05
CKLF-208ENST00000563092 TLE1Q04724 770 aa8.49□□□□□ -1.05
CKLF-208ENST00000563092 SERINC3Q13530 473 aa8.49□□□□□ -1.05
CKLF-208ENST00000563092 COBLL1Q53SF7 1204 aa8.49□□□□□ -1.05
CKLF-208ENST00000563092 CRTC1Q6UUV9 634 aa8.49□□□□□ -1.05
CKLF-208ENST00000563092 DENND6BQ8NEG7 585 aa8.49□□□□□ -1.05
CKLF-208ENST00000563092 BTN2A2Q8WVV5 523 aa8.49□□□□□ -1.05
CKLF-208ENST00000563092 HTR3CQ8WXA8 447 aa8.49□□□□□ -1.05
CKLF-208ENST00000563092 KAT5Q92993 513 aa8.49□□□□□ -1.05
CKLF-208ENST00000563092 FAM149B1Q96BN6 582 aa8.49□□□□□ -1.05
CKLF-208ENST00000563092 CENPTQ96BT3 561 aa8.49□□□□□ -1.05
CKLF-208ENST00000563092 PSMG3-AS1Q96PY0 264 aa8.49□□□□□ -1.05
CKLF-208ENST00000563092 IL12RB2Q99665 862 aa8.49□□□□□ -1.05
CKLF-208ENST00000563092 CCDC3Q9BQI4 270 aa8.49□□□□□ -1.05
CKLF-208ENST00000563092 LRRC61Q9BV99 259 aa8.49□□□□□ -1.05
CKLF-208ENST00000563092 B3GNT4Q9C0J1 378 aa8.49□□□□□ -1.05
CKLF-208ENST00000563092 CLPBQ9H078 707 aa8.49□□□□□ -1.05
CKLF-208ENST00000563092 SLC25A18Q9H1K4 315 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms