RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 PANX2Q96RD6 677 aa16.9■□□□□ 0.3
CDT1-202ENST00000562747 CEP44Q9C0F1 390 aa16.9■□□□□ 0.3
CDT1-202ENST00000562747 PABPC3Q9H361 631 aaKnown RBP16.9■□□□□ 0.3
CDT1-202ENST00000562747 NCKAP1Q9Y2A7 1128 aa16.9■□□□□ 0.3
CDT1-202ENST00000562747 PTPRBP23467 1997 aa16.89■□□□□ 0.3
CDT1-202ENST00000562747 ZSCAN5CA6NGD5 496 aaPredicted RBP16.89■□□□□ 0.29
CDT1-202ENST00000562747 MCF2LO15068 1137 aa16.89■□□□□ 0.29
CDT1-202ENST00000562747 DAPK3O43293 454 aa16.89■□□□□ 0.29
CDT1-202ENST00000562747 PROSCO94903 275 aa16.89■□□□□ 0.29
CDT1-202ENST00000562747 SLC25A11Q02978 314 aaKnown RBP16.89■□□□□ 0.29
CDT1-202ENST00000562747 HADHQ16836 314 aaKnown RBP16.89■□□□□ 0.29
CDT1-202ENST00000562747 PARP15Q460N3 678 aa16.89■□□□□ 0.29
CDT1-202ENST00000562747 PPP6R3Q5H9R7 873 aaPredicted RBP16.89■□□□□ 0.29
CDT1-202ENST00000562747 C22orf39Q6P5X5 142 aa16.89■□□□□ 0.29
CDT1-202ENST00000562747 RFX8Q6ZV50 586 aa16.89■□□□□ 0.29
CDT1-202ENST00000562747 Q6ZVU0 165 aa16.89■□□□□ 0.29
CDT1-202ENST00000562747 RHOT2Q8IXI1 618 aa16.89■□□□□ 0.29
CDT1-202ENST00000562747 CCDC170Q8IYT3 715 aa16.89■□□□□ 0.29
CDT1-202ENST00000562747 BTBD1Q9H0C5 482 aa16.89■□□□□ 0.29
CDT1-202ENST00000562747 PCED1AQ9H1Q7 454 aa16.89■□□□□ 0.29
CDT1-202ENST00000562747 NOL6Q9H6R4 1146 aaKnown RBP16.89■□□□□ 0.29
CDT1-202ENST00000562747 ZWILCHQ9H900 591 aa16.89■□□□□ 0.29
CDT1-202ENST00000562747 IL21RQ9HBE5 538 aa16.89■□□□□ 0.29
CDT1-202ENST00000562747 SGK2Q9HBY8 427 aa16.89■□□□□ 0.29
CDT1-202ENST00000562747 FARP1Q9Y4F1 1045 aaPredicted RBP16.89■□□□□ 0.29
CDT1-202ENST00000562747 RASA4BC9J798 803 aa16.88■□□□□ 0.29
CDT1-202ENST00000562747 H3BRJ5 948 aa16.88■□□□□ 0.29
CDT1-202ENST00000562747 K7ERQ8 282 aa16.88■□□□□ 0.29
CDT1-202ENST00000562747 MID1O15344 667 aa16.88■□□□□ 0.29
CDT1-202ENST00000562747 RASA4O43374 803 aa16.88■□□□□ 0.29
CDT1-202ENST00000562747 SMAD6O43541 496 aaKnown RBP16.88■□□□□ 0.29
CDT1-202ENST00000562747 KDELR3O43731 214 aa16.88■□□□□ 0.29
CDT1-202ENST00000562747 MTA2O94776 668 aa16.88■□□□□ 0.29
CDT1-202ENST00000562747 LCA5LO95447 670 aa16.88■□□□□ 0.29
CDT1-202ENST00000562747 IL1BP01584 269 aa16.88■□□□□ 0.29
CDT1-202ENST00000562747 RARAP10276 462 aa16.88■□□□□ 0.29
CDT1-202ENST00000562747 TCF4P15884 667 aa16.88■□□□□ 0.29
CDT1-202ENST00000562747 GOT1P17174 413 aa16.88■□□□□ 0.29
CDT1-202ENST00000562747 C5AR1P21730 350 aa16.88■□□□□ 0.29
CDT1-202ENST00000562747 FECHP22830 423 aa16.88■□□□□ 0.29
CDT1-202ENST00000562747 CDC25BP30305 580 aa16.88■□□□□ 0.29
CDT1-202ENST00000562747 SLC8A1P32418 973 aa16.88■□□□□ 0.29
CDT1-202ENST00000562747 MAN1A1P33908 653 aa16.88■□□□□ 0.29
CDT1-202ENST00000562747 ARL4AP40617 200 aa16.88■□□□□ 0.29
CDT1-202ENST00000562747 PSMD8P48556 350 aa16.88■□□□□ 0.29
CDT1-202ENST00000562747 NDST2P52849 883 aa16.88■□□□□ 0.29
CDT1-202ENST00000562747 BNC1Q01954 994 aa16.88■□□□□ 0.29
CDT1-202ENST00000562747 SLC14A1Q13336 389 aa16.88■□□□□ 0.29
CDT1-202ENST00000562747 SMTNL2Q2TAL5 461 aa16.88■□□□□ 0.29
CDT1-202ENST00000562747 KCNT1Q5JUK3 1230 aa16.88■□□□□ 0.29
CDT1-202ENST00000562747 FAM46CQ5VWP2 391 aa16.88■□□□□ 0.29
CDT1-202ENST00000562747 ZCCHC9Q8N567 271 aaKnown RBP16.88■□□□□ 0.29
CDT1-202ENST00000562747 PCDH20Q8N6Y1 951 aaKnown RBP16.88■□□□□ 0.29
CDT1-202ENST00000562747 OR2A12Q8NGT7 310 aa16.88■□□□□ 0.29
CDT1-202ENST00000562747 SLC35G2Q8TBE7 412 aa16.88■□□□□ 0.29
CDT1-202ENST00000562747 ADAMTS14Q8WXS8 1223 aa16.88■□□□□ 0.29
CDT1-202ENST00000562747 RFFLQ8WZ73 363 aa16.88■□□□□ 0.29
CDT1-202ENST00000562747 HSPH1Q92598 858 aa16.88■□□□□ 0.29
CDT1-202ENST00000562747 ISG20Q96AZ6 181 aaKnown RBP16.88■□□□□ 0.29
CDT1-202ENST00000562747 GPR174Q9BXC1 333 aa16.88■□□□□ 0.29
CDT1-202ENST00000562747 OSGEPQ9NPF4 335 aa16.88■□□□□ 0.29
CDT1-202ENST00000562747 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.88■□□□□ 0.29
CDT1-202ENST00000562747 FBXL12Q9NXK8 326 aa16.88■□□□□ 0.29
CDT1-202ENST00000562747 CWC15Q9P013 229 aaKnown RBP16.88■□□□□ 0.29
CDT1-202ENST00000562747 SUSD2Q9UGT4 822 aa16.88■□□□□ 0.29
CDT1-202ENST00000562747 FZD4Q9ULV1 537 aa16.88■□□□□ 0.29
CDT1-202ENST00000562747 MEI4A8MW99 385 aa16.87■□□□□ 0.29
CDT1-202ENST00000562747 C1QTNF3-AMACRE9PGA6 284 aa16.87■□□□□ 0.29
CDT1-202ENST00000562747 CBFA2T3O75081 653 aa16.87■□□□□ 0.29
CDT1-202ENST00000562747 CD160O95971 181 aa16.87■□□□□ 0.29
CDT1-202ENST00000562747 ERCC2P18074 760 aa16.87■□□□□ 0.29
CDT1-202ENST00000562747 ACSL1P33121 698 aa16.87■□□□□ 0.29
CDT1-202ENST00000562747 CYLC1P35663 651 aaPredicted RBP16.87■□□□□ 0.29
CDT1-202ENST00000562747 ARHGAP25P42331 645 aa16.87■□□□□ 0.29
CDT1-202ENST00000562747 RECQLP46063 649 aaPredicted RBP16.87■□□□□ 0.29
CDT1-202ENST00000562747 HNRNPDQ14103 355 aaKnown RBP16.87■□□□□ 0.29
CDT1-202ENST00000562747 DPYSQ14117 519 aa16.87■□□□□ 0.29
CDT1-202ENST00000562747 TCEAL1Q15170 157 aa16.87■□□□□ 0.29
CDT1-202ENST00000562747 WDR45BQ5MNZ6 344 aa16.87■□□□□ 0.29
CDT1-202ENST00000562747 SYCP2LQ5T4T6 812 aa16.87■□□□□ 0.29
CDT1-202ENST00000562747 POLNQ7Z5Q5 900 aa16.87■□□□□ 0.29
CDT1-202ENST00000562747 FAM124AQ86V42 546 aa16.87■□□□□ 0.29
CDT1-202ENST00000562747 ZNF354CQ86Y25 554 aa16.87■□□□□ 0.29
CDT1-202ENST00000562747 PLPP6Q8IY26 295 aa16.87■□□□□ 0.29
CDT1-202ENST00000562747 GANCQ8TET4 914 aa16.87■□□□□ 0.29
CDT1-202ENST00000562747 CASKIN2Q8WXE0 1202 aa16.87■□□□□ 0.29
CDT1-202ENST00000562747 DNASE2BQ8WZ79 361 aa16.87■□□□□ 0.29
CDT1-202ENST00000562747 HMCESQ96FZ2 354 aa16.87■□□□□ 0.29
CDT1-202ENST00000562747 OMDQ99983 421 aa16.87■□□□□ 0.29
CDT1-202ENST00000562747 LRRC19Q9H756 370 aa16.87■□□□□ 0.29
CDT1-202ENST00000562747 PPM1HQ9ULR3 514 aa16.87■□□□□ 0.29
CDT1-202ENST00000562747 GPSM3Q9Y4H4 160 aa16.87■□□□□ 0.29
CDT1-202ENST00000562747 FASNP49327 2511 aaKnown RBP16.86■□□□□ 0.29
CDT1-202ENST00000562747 A0A1W2PP55 124 aa16.86■□□□□ 0.29
CDT1-202ENST00000562747 METTL12A8MUP2 240 aa16.86■□□□□ 0.29
CDT1-202ENST00000562747 BNIP3LO60238 219 aa16.86■□□□□ 0.29
CDT1-202ENST00000562747 ZNF821O75541 412 aaPredicted RBP16.86■□□□□ 0.29
CDT1-202ENST00000562747 SEMA4FO95754 770 aa16.86■□□□□ 0.29
CDT1-202ENST00000562747 SSR1P43307 286 aaKnown RBP16.86■□□□□ 0.29
CDT1-202ENST00000562747 MAGEA1P43355 309 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms