RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 FAM217AQ8IXS0 508 aa3.36□□□□□ -1.87
DENND4A-205ENST00000562540 EXOC8Q8IYI6 725 aa3.36□□□□□ -1.87
DENND4A-205ENST00000562540 RFLNBQ8N5W9 214 aa3.36□□□□□ -1.87
DENND4A-205ENST00000562540 ENDOVQ8N8Q3 282 aaKnown RBP3.36□□□□□ -1.87
DENND4A-205ENST00000562540 FSIP1Q8NA03 581 aa3.36□□□□□ -1.87
DENND4A-205ENST00000562540 OR14A16Q8NHC5 309 aa3.36□□□□□ -1.87
DENND4A-205ENST00000562540 CSGALNACT1Q8TDX6 532 aa3.36□□□□□ -1.87
DENND4A-205ENST00000562540 AFG1LQ8WV93 481 aa3.36□□□□□ -1.87
DENND4A-205ENST00000562540 TMED6Q8WW62 240 aa3.36□□□□□ -1.87
DENND4A-205ENST00000562540 IGSF21Q96ID5 467 aa3.36□□□□□ -1.87
DENND4A-205ENST00000562540 IL21RQ9HBE5 538 aa3.36□□□□□ -1.87
DENND4A-205ENST00000562540 SLC25A13Q9UJS0 675 aa3.36□□□□□ -1.87
DENND4A-205ENST00000562540 PCDHA10Q9Y5I2 948 aa3.36□□□□□ -1.87
DENND4A-205ENST00000562540 CKAP5Q14008 2032 aa3.36□□□□□ -1.87
DENND4A-205ENST00000562540 KIF26BQ2KJY2 2108 aa3.35□□□□□ -1.87
DENND4A-205ENST00000562540 MS4A18H0YCH9 400 aa3.35□□□□□ -1.87
DENND4A-205ENST00000562540 SEPT4O43236 478 aa3.35□□□□□ -1.87
DENND4A-205ENST00000562540 FAM155BO75949 473 aa3.35□□□□□ -1.87
DENND4A-205ENST00000562540 TFRCP02786 760 aaKnown RBP3.35□□□□□ -1.87
DENND4A-205ENST00000562540 TK1P04183 234 aa3.35□□□□□ -1.87
DENND4A-205ENST00000562540 ARL4CP56559 192 aa3.35□□□□□ -1.87
DENND4A-205ENST00000562540 ACTR2P61160 394 aa3.35□□□□□ -1.87
DENND4A-205ENST00000562540 ARL13AQ5H913 290 aaPredicted RBP3.35□□□□□ -1.87
DENND4A-205ENST00000562540 CEP85LQ5SZL2 805 aa3.35□□□□□ -1.87
DENND4A-205ENST00000562540 KIAA1324Q6UXG2 1013 aaKnown RBP3.35□□□□□ -1.87
DENND4A-205ENST00000562540 DSTYKQ6XUX3 929 aa3.35□□□□□ -1.87
DENND4A-205ENST00000562540 SMC5Q8IY18 1101 aa3.35□□□□□ -1.87
DENND4A-205ENST00000562540 FTSJ3Q8IY81 847 aaKnown RBP3.35□□□□□ -1.87
DENND4A-205ENST00000562540 PTGR2Q8N8N7 351 aaPredicted RBP3.35□□□□□ -1.87
DENND4A-205ENST00000562540 CEP70Q8NHQ1 597 aa3.35□□□□□ -1.87
DENND4A-205ENST00000562540 SPPL3Q8TCT6 385 aa3.35□□□□□ -1.87
DENND4A-205ENST00000562540 RILPL2Q969X0 211 aa3.35□□□□□ -1.87
DENND4A-205ENST00000562540 ARRDC3Q96B67 414 aa3.35□□□□□ -1.87
DENND4A-205ENST00000562540 TBC1D20Q96BZ9 403 aa3.35□□□□□ -1.87
DENND4A-205ENST00000562540 APOLD1Q96LR9 279 aa3.35□□□□□ -1.87
DENND4A-205ENST00000562540 ADAD1Q96M93 576 aaKnown RBP3.35□□□□□ -1.87
DENND4A-205ENST00000562540 CLPBQ9H078 707 aa3.35□□□□□ -1.87
DENND4A-205ENST00000562540 MYH16Q9H6N6 1097 aa3.35□□□□□ -1.87
DENND4A-205ENST00000562540 FEM1BQ9UK73 627 aa3.35□□□□□ -1.87
DENND4A-205ENST00000562540 RCE1Q9Y256 329 aa3.35□□□□□ -1.87
DENND4A-205ENST00000562540 PCDHGB3Q9Y5G1 929 aa3.35□□□□□ -1.87
DENND4A-205ENST00000562540 FAM90A20PA6NIJ5 464 aa3.34□□□□□ -1.87
DENND4A-205ENST00000562540 MCIDASD6RGH6 385 aa3.34□□□□□ -1.87
DENND4A-205ENST00000562540 CCNT1O60563 726 aaKnown RBP3.34□□□□□ -1.87
DENND4A-205ENST00000562540 SERPINB2P05120 415 aa3.34□□□□□ -1.87
DENND4A-205ENST00000562540 CYP21A2P08686 494 aa3.34□□□□□ -1.87
DENND4A-205ENST00000562540 F7P08709 466 aaPredicted RBP3.34□□□□□ -1.87
DENND4A-205ENST00000562540 ZNF12P17014 697 aa3.34□□□□□ -1.87
DENND4A-205ENST00000562540 RXRAP19793 462 aa3.34□□□□□ -1.87
DENND4A-205ENST00000562540 ITGB8P26012 769 aa3.34□□□□□ -1.87
DENND4A-205ENST00000562540 SLC16A2P36021 539 aa3.34□□□□□ -1.87
DENND4A-205ENST00000562540 PPM1FP49593 454 aaPredicted RBP3.34□□□□□ -1.87
DENND4A-205ENST00000562540 OAZ1P54368 228 aa3.34□□□□□ -1.87
DENND4A-205ENST00000562540 CDK18Q07002 472 aa3.34□□□□□ -1.87
DENND4A-205ENST00000562540 BIRC3Q13489 604 aa3.34□□□□□ -1.87
DENND4A-205ENST00000562540 SF3B4Q15427 424 aaKnown RBP eCLIP3.34□□□□□ -1.87
DENND4A-205ENST00000562540 DUSP6Q16828 381 aa3.34□□□□□ -1.87
DENND4A-205ENST00000562540 GXYLT1Q4G148 440 aa3.34□□□□□ -1.87
DENND4A-205ENST00000562540 MEX3BQ6ZN04 569 aaKnown RBP3.34□□□□□ -1.87
DENND4A-205ENST00000562540 ZNF367Q7RTV3 350 aa3.34□□□□□ -1.87
DENND4A-205ENST00000562540 MDGA2Q7Z553 956 aa3.34□□□□□ -1.87
DENND4A-205ENST00000562540 ANKS1BQ7Z6G8 1248 aa3.34□□□□□ -1.87
DENND4A-205ENST00000562540 MOGAT3Q86VF5 341 aa3.34□□□□□ -1.87
DENND4A-205ENST00000562540 FAM185AQ8N0U4 392 aa3.34□□□□□ -1.87
DENND4A-205ENST00000562540 TMEM57Q8N5G2 664 aa3.34□□□□□ -1.87
DENND4A-205ENST00000562540 KDM1BQ8NB78 822 aa3.34□□□□□ -1.87
DENND4A-205ENST00000562540 FAM216AQ8WUB2 273 aa3.34□□□□□ -1.87
DENND4A-205ENST00000562540 KCNJ9Q92806 393 aa3.34□□□□□ -1.87
DENND4A-205ENST00000562540 SDCCAG3Q96C92 435 aa3.34□□□□□ -1.87
DENND4A-205ENST00000562540 GCC1Q96CN9 775 aa3.34□□□□□ -1.87
DENND4A-205ENST00000562540 FIZ1Q96SL8 496 aa3.34□□□□□ -1.87
DENND4A-205ENST00000562540 PYM1Q9BRP8 204 aaKnown RBP3.34□□□□□ -1.87
DENND4A-205ENST00000562540 B3GNT4Q9C0J1 378 aa3.34□□□□□ -1.87
DENND4A-205ENST00000562540 ABHD16BQ9H3Z7 469 aa3.34□□□□□ -1.87
DENND4A-205ENST00000562540 CHODLQ9H9P2 273 aa3.34□□□□□ -1.87
DENND4A-205ENST00000562540 PLEKHA2Q9HB19 425 aa3.34□□□□□ -1.87
DENND4A-205ENST00000562540 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.34□□□□□ -1.87
DENND4A-205ENST00000562540 RRP7AQ9Y3A4 280 aaKnown RBP3.34□□□□□ -1.87
DENND4A-205ENST00000562540 LMTK3Q96Q04 1460 aa3.34□□□□□ -1.88
DENND4A-205ENST00000562540 PLEKHD1A6NEE1 506 aa3.33□□□□□ -1.88
DENND4A-205ENST00000562540 NPIPB13A6NJU9 1138 aa3.33□□□□□ -1.88
DENND4A-205ENST00000562540 SAC3D1A6NKF1 404 aa3.33□□□□□ -1.88
DENND4A-205ENST00000562540 NPIPB5A8MRT5 1133 aa3.33□□□□□ -1.88
DENND4A-205ENST00000562540 NPIPB4C9JG80 1138 aa3.33□□□□□ -1.88
DENND4A-205ENST00000562540 SYN3O14994 580 aa3.33□□□□□ -1.88
DENND4A-205ENST00000562540 CSF1P09603 554 aa3.33□□□□□ -1.88
DENND4A-205ENST00000562540 PRPH2P23942 346 aa3.33□□□□□ -1.88
DENND4A-205ENST00000562540 GSTM2P28161 218 aa3.33□□□□□ -1.88
DENND4A-205ENST00000562540 TNFSF8P32971 234 aa3.33□□□□□ -1.88
DENND4A-205ENST00000562540 PNPLA4P41247 253 aa3.33□□□□□ -1.88
DENND4A-205ENST00000562540 STAT1P42224 750 aa3.33□□□□□ -1.88
DENND4A-205ENST00000562540 CCT5P48643 541 aa3.33□□□□□ -1.88
DENND4A-205ENST00000562540 ACSM2AQ08AH3 577 aa3.33□□□□□ -1.88
DENND4A-205ENST00000562540 PPFIA1Q13136 1202 aa3.33□□□□□ -1.88
DENND4A-205ENST00000562540 ALKBH1Q13686 389 aaKnown RBP3.33□□□□□ -1.88
DENND4A-205ENST00000562540 DCTN1Q14203 1278 aa3.33□□□□□ -1.88
DENND4A-205ENST00000562540 RBM39Q14498 530 aaKnown RBP3.33□□□□□ -1.88
DENND4A-205ENST00000562540 LRRC24Q50LG9 513 aa3.33□□□□□ -1.88
DENND4A-205ENST00000562540 RUNDC3AQ59EK9 446 aa3.33□□□□□ -1.88
DENND4A-205ENST00000562540 ZNF449Q6P9G9 518 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms