RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 PPARGC1AQ9UBK2 798 aaKnown RBP17.03■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 FCF1Q9Y324 198 aaKnown RBP17.03■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 FADS3Q9Y5Q0 445 aa17.03■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 FASNP49327 2511 aaKnown RBP17.02■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 POM121BA6NF01 834 aa17.02■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 A6NNZ2 444 aa17.02■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 RAD51BO15315 384 aa17.02■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 BRINP1O60477 761 aa17.02■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 MYF5P13349 255 aa17.02■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 CCNHP51946 323 aaPredicted RBP17.02■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 DAB2P98082 770 aa17.02■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 ATP11AP98196 1134 aa17.02■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 ZNF542PQ5EBM4 170 aa17.02■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 CARD16Q5EG05 197 aa17.02■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 Q6ZSR6 202 aa17.02■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 PARS2Q7L3T8 475 aaKnown RBP17.02■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 TMC6Q7Z403 805 aa17.02■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 SNIP1Q8TAD8 396 aaKnown RBP17.02■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 SLC20A1Q8WUM9 679 aa17.02■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 VOPP1Q96AW1 172 aa17.02■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 HEPHQ9BQS7 1158 aa17.02■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 SLC17A9Q9BYT1 436 aa17.02■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 STK33Q9BYT3 514 aa17.02■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 NDFIP2Q9NV92 336 aa17.02■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 NOCTQ9UK39 431 aaKnown RBP17.02■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 MGAQ8IWI9 3026 aa17.01■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 LY6G6EA0A0G2JKS1 128 aa17.01■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 PES1O00541 588 aaKnown RBP17.01■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 PAK4O96013 591 aaPredicted RBP17.01■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 MT-CO3P00414 261 aa17.01■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 CKMT1AP12532 417 aa17.01■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 L1CAMP32004 1257 aa17.01■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 GKP32189 559 aa17.01■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 ACVRL1P37023 503 aa17.01■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 DNA2P51530 1060 aa17.01■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 RPS21P63220 83 aaKnown RBP17.01■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 E2F1Q01094 437 aa17.01■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 SLC20A2Q08357 652 aa17.01■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 MAPK8IP2Q13387 824 aaPredicted RBP17.01■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 FZD2Q14332 565 aa17.01■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 C15orf59Q2T9L4 293 aaPredicted RBP17.01■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 TCP11X2Q5H9J9 407 aa17.01■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 MANEALQ5VSG8 457 aa17.01■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 KIAA1161Q6NSJ0 714 aa17.01■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 KYAT3Q6YP21 454 aaKnown RBP17.01■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 KDM7AQ6ZMT4 941 aa17.01■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 PTAR1Q7Z6K3 402 aaPredicted RBP17.01■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 MSANTD4Q8NCY6 345 aa17.01■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 IFT43Q96FT9 208 aa17.01■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 APOLD1Q96LR9 279 aa17.01■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 TM6SF2Q9BZW4 377 aa17.01■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 PRORYQ9H606 182 aa17.01■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 DNAJC28Q9NX36 388 aa17.01■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 NLGN3Q9NZ94 848 aa17.01■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 NEU3Q9UQ49 428 aa17.01■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 PCDHB1Q9Y5F3 818 aa17.01■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 RAI2Q9Y5P3 530 aa17.01■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 HS3ST3A1Q9Y663 406 aa17.01■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 U3KQA8 63 aa17.01■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 FAM72CH0Y354 149 aa17■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 AP1G1O43747 822 aa17■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 ABL2P42684 1182 aa17■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 CDO1Q16878 200 aa17■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 CCDC14Q49A88 953 aa17■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 HS1BP3Q53T59 392 aa17■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 FAM72AQ5TYM5 149 aa17■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 CDCP2Q5VXM1 449 aa17■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 FAM72DQ6L9T8 149 aa17■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 LRRC69Q6ZNQ3 347 aa17■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 PHLDB2Q86SQ0 1253 aa17■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 NLRP14Q86W24 1093 aa17■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 FAM72BQ86X60 149 aa17■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 OR6K2Q8NGY2 324 aa17■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 FAM174AQ8TBP5 190 aa17■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 KLF6Q99612 283 aaPredicted RBP17■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 MAGEB5Q9BZ81 275 aa17■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 GANQ9H2C0 597 aa17■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 ZDHHC6Q9H6R6 413 aa17■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 TAB2Q9NYJ8 693 aa17■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 HECAQ9UBI9 543 aaPredicted RBP17■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 OR12D3Q9UGF7 316 aa17■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 CHD5Q8TDI0 1954 aa17■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 SPTY2D1-AS1A0A0U1RR47 76 aa16.99■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 K7ESM1 405 aa16.99■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 SCAMP1O15126 338 aa16.99■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 RRP8O43159 456 aaKnown RBP16.99■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 NEBLO76041 1014 aa16.99■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 GFPT2O94808 682 aa16.99■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 GJB6O95452 261 aa16.99■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 CYP1A1P04798 512 aaPredicted RBP16.99■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 ALPPL2P10696 532 aa16.99■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 CHRNB2P17787 502 aa16.99■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 MMP8P22894 467 aa16.99■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 ADRA1BP35368 520 aa16.99■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 KLK7P49862 253 aa16.99■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 NRG1Q02297 640 aaPredicted RBP16.99■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 TPRG1LQ5T0D9 272 aa16.99■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 DCP2Q8IU60 420 aaKnown RBP16.99■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 ZNF548Q8NEK5 533 aaPredicted RBP16.99■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 JOSD2Q8TAC2 188 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms