RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, human

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC28-222	ENST00000561431	PKN2	Q16513	984 aa	Known RBP	4.41	□□□□□ -1.7
LRRC28-222	ENST00000561431	NFRKB	Q6P4R8	1299 aa		4.41	□□□□□ -1.7
LRRC28-222	ENST00000561431	KIRREL2	Q6UWL6	708 aa		4.41	□□□□□ -1.7
LRRC28-222	ENST00000561431	ABRAXAS1	Q6UWZ7	409 aa		4.41	□□□□□ -1.7
LRRC28-222	ENST00000561431	RASGRP2	Q7LDG7	609 aa		4.41	□□□□□ -1.7
LRRC28-222	ENST00000561431	PI4KAP1	Q8N8J0	262 aa		4.41	□□□□□ -1.7
LRRC28-222	ENST00000561431	CCDC191	Q8NCU4	936 aa		4.41	□□□□□ -1.7
LRRC28-222	ENST00000561431	SCAMP5	Q8TAC9	235 aa		4.41	□□□□□ -1.7
LRRC28-222	ENST00000561431	GRAPL	Q8TC17	118 aa	Predicted RBP	4.41	□□□□□ -1.7
LRRC28-222	ENST00000561431	OTUD7A	Q8TE49	926 aa	Predicted RBP	4.41	□□□□□ -1.7
LRRC28-222	ENST00000561431	SLC22A17	Q8WUG5	538 aa		4.41	□□□□□ -1.7
LRRC28-222	ENST00000561431	GIMAP1	Q8WWP7	306 aa		4.41	□□□□□ -1.7
LRRC28-222	ENST00000561431	HDAC2	Q92769	488 aa	Known RBP	4.41	□□□□□ -1.7
LRRC28-222	ENST00000561431	WDYHV1	Q96HA8	205 aa		4.41	□□□□□ -1.7
LRRC28-222	ENST00000561431	RBM17	Q96I25	401 aa	Known RBP	4.41	□□□□□ -1.7
LRRC28-222	ENST00000561431	FAR2	Q96K12	515 aa		4.41	□□□□□ -1.7
LRRC28-222	ENST00000561431	WDR24	Q96S15	920 aa		4.41	□□□□□ -1.7
LRRC28-222	ENST00000561431	POLR3C	Q9BUI4	534 aa	Predicted RBP	4.41	□□□□□ -1.7
LRRC28-222	ENST00000561431	CIPC	Q9C0C6	399 aa		4.41	□□□□□ -1.7
LRRC28-222	ENST00000561431	LMAN2L	Q9H0V9	348 aa		4.41	□□□□□ -1.7
LRRC28-222	ENST00000561431	PABPC3	Q9H361	631 aa	Known RBP	4.41	□□□□□ -1.7
LRRC28-222	ENST00000561431	FSCN3	Q9NQT6	498 aa		4.41	□□□□□ -1.7
LRRC28-222	ENST00000561431	IL17RB	Q9NRM6	502 aa		4.41	□□□□□ -1.7
LRRC28-222	ENST00000561431	SH3BP4	Q9P0V3	963 aa		4.41	□□□□□ -1.7
LRRC28-222	ENST00000561431	ZNF112	Q9UJU3	913 aa		4.41	□□□□□ -1.7
LRRC28-222	ENST00000561431	TLK1	Q9UKI8	766 aa		4.41	□□□□□ -1.7
LRRC28-222	ENST00000561431	GABRQ	Q9UN88	632 aa		4.41	□□□□□ -1.7
LRRC28-222	ENST00000561431	GPR52	Q9Y2T5	361 aa		4.41	□□□□□ -1.7
LRRC28-222	ENST00000561431	ATP6V0A2	Q9Y487	856 aa		4.41	□□□□□ -1.7
LRRC28-222	ENST00000561431	DMRT1	Q9Y5R6	373 aa		4.41	□□□□□ -1.7
LRRC28-222	ENST00000561431	ZNF646	O15015	1829 aa	Predicted RBP	4.41	□□□□□ -1.7
LRRC28-222	ENST00000561431	COL4A3	Q01955	1670 aa		4.41	□□□□□ -1.7
LRRC28-222	ENST00000561431	CDHR2	Q9BYE9	1310 aa		4.41	□□□□□ -1.7
LRRC28-222	ENST00000561431	RTL9	Q8NET4	1388 aa		4.4	□□□□□ -1.7
LRRC28-222	ENST00000561431		A0A1B0GUL6	1792 aa		4.4	□□□□□ -1.7
LRRC28-222	ENST00000561431	SPEF2	Q9C093	1822 aa		4.4	□□□□□ -1.7
LRRC28-222	ENST00000561431	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	4.4	□□□□□ -1.71
LRRC28-222	ENST00000561431	TRIM64	A6NGJ6	449 aa		4.4	□□□□□ -1.71
LRRC28-222	ENST00000561431	TRIM64B	A6NI03	449 aa		4.4	□□□□□ -1.71
LRRC28-222	ENST00000561431	KIF1C	O43896	1103 aa	Known RBP	4.4	□□□□□ -1.71
LRRC28-222	ENST00000561431	GCAT	O75600	419 aa		4.4	□□□□□ -1.71
LRRC28-222	ENST00000561431	RPP40	O75818	363 aa	Known RBP	4.4	□□□□□ -1.71
LRRC28-222	ENST00000561431	TPPP	O94811	219 aa		4.4	□□□□□ -1.71
LRRC28-222	ENST00000561431	TOMM70	O94826	608 aa		4.4	□□□□□ -1.71
LRRC28-222	ENST00000561431	LARGE1	O95461	756 aa		4.4	□□□□□ -1.71
LRRC28-222	ENST00000561431	TMIGD3	P0DMS9	266 aa	Predicted RBP	4.4	□□□□□ -1.71
LRRC28-222	ENST00000561431	FPR3	P25089	353 aa		4.4	□□□□□ -1.71
LRRC28-222	ENST00000561431	MCM5	P33992	734 aa		4.4	□□□□□ -1.71
LRRC28-222	ENST00000561431	IGHMBP2	P38935	993 aa	Known RBP	4.4	□□□□□ -1.71
LRRC28-222	ENST00000561431	DIO1	P49895	249 aa		4.4	□□□□□ -1.71
LRRC28-222	ENST00000561431	PAPOLA	P51003	745 aa	Known RBP	4.4	□□□□□ -1.71
LRRC28-222	ENST00000561431	SIM1	P81133	766 aa	Predicted RBP	4.4	□□□□□ -1.71
LRRC28-222	ENST00000561431	DEUP1	Q05D60	604 aa		4.4	□□□□□ -1.71
LRRC28-222	ENST00000561431	SF3A3	Q12874	501 aa	Known RBP eCLIP	4.4	□□□□□ -1.71
LRRC28-222	ENST00000561431	MTAP	Q13126	283 aa		4.4	□□□□□ -1.71
LRRC28-222	ENST00000561431	FHL3	Q13643	280 aa		4.4	□□□□□ -1.71
LRRC28-222	ENST00000561431	AASDH	Q4L235	1098 aa	Predicted RBP	4.4	□□□□□ -1.71
LRRC28-222	ENST00000561431	GRHL2	Q6ISB3	625 aa		4.4	□□□□□ -1.71
LRRC28-222	ENST00000561431	LIN54	Q6MZP7	749 aa		4.4	□□□□□ -1.71
LRRC28-222	ENST00000561431	PIK3AP1	Q6ZUJ8	805 aa		4.4	□□□□□ -1.71
LRRC28-222	ENST00000561431	MRGPRG	Q86SM5	289 aa		4.4	□□□□□ -1.71
LRRC28-222	ENST00000561431	TRABD2A	Q86V40	505 aa		4.4	□□□□□ -1.71
LRRC28-222	ENST00000561431	SFTPA1	Q8IWL2	248 aa		4.4	□□□□□ -1.71
LRRC28-222	ENST00000561431	C16orf71	Q8IYS4	520 aa	Predicted RBP	4.4	□□□□□ -1.71
LRRC28-222	ENST00000561431	PNPLA1	Q8N8W4	532 aa		4.4	□□□□□ -1.71
LRRC28-222	ENST00000561431	OR1N1	Q8NGS0	311 aa		4.4	□□□□□ -1.71
LRRC28-222	ENST00000561431	STT3B	Q8TCJ2	826 aa		4.4	□□□□□ -1.71
LRRC28-222	ENST00000561431	RSC1A1	Q92681	617 aa		4.4	□□□□□ -1.71
LRRC28-222	ENST00000561431	CELF1	Q92879	486 aa	Known RBP	4.4	□□□□□ -1.71
LRRC28-222	ENST00000561431	ITFG2	Q969R8	447 aa		4.4	□□□□□ -1.71
LRRC28-222	ENST00000561431	DAZAP1	Q96EP5	407 aa	Known RBP	4.4	□□□□□ -1.71
LRRC28-222	ENST00000561431	ZNF830	Q96NB3	372 aa	Predicted RBP	4.4	□□□□□ -1.71
LRRC28-222	ENST00000561431	FAM210A	Q96ND0	272 aa		4.4	□□□□□ -1.71
LRRC28-222	ENST00000561431	LENG8	Q96PV6	779 aa	Predicted RBP	4.4	□□□□□ -1.71
LRRC28-222	ENST00000561431	PAIP2	Q9BPZ3	127 aa	Known RBP	4.4	□□□□□ -1.71
LRRC28-222	ENST00000561431	FSD1L	Q9BXM9	530 aa		4.4	□□□□□ -1.71
LRRC28-222	ENST00000561431	PLEKHA5	Q9HAU0	1116 aa		4.4	□□□□□ -1.71
LRRC28-222	ENST00000561431	PRDM8	Q9NQV8	689 aa		4.4	□□□□□ -1.71
LRRC28-222	ENST00000561431	SLC17A6	Q9P2U8	582 aa		4.4	□□□□□ -1.71
LRRC28-222	ENST00000561431	TBK1	Q9UHD2	729 aa		4.4	□□□□□ -1.71
LRRC28-222	ENST00000561431	DAPP1	Q9UN19	280 aa		4.4	□□□□□ -1.71
LRRC28-222	ENST00000561431	C19orf53	Q9UNZ5	99 aa	Predicted RBP	4.4	□□□□□ -1.71
LRRC28-222	ENST00000561431	UBE2J1	Q9Y385	318 aa	Predicted RBP	4.4	□□□□□ -1.71
LRRC28-222	ENST00000561431	SCN4A	P35499	1836 aa		4.39	□□□□□ -1.71
LRRC28-222	ENST00000561431	CEP350	Q5VT06	3117 aa		4.39	□□□□□ -1.71
LRRC28-222	ENST00000561431	MYH3	P11055	1940 aa		4.39	□□□□□ -1.71
LRRC28-222	ENST00000561431	TBC1D3D	A0A087WVF3	549 aa		4.39	□□□□□ -1.71
LRRC28-222	ENST00000561431	TBC1D3I	A0A087WXS9	549 aa		4.39	□□□□□ -1.71
LRRC28-222	ENST00000561431	TBC1D3E	A0A087X179	549 aa		4.39	□□□□□ -1.71
LRRC28-222	ENST00000561431	TBC1D3K	A0A087X1G2	549 aa		4.39	□□□□□ -1.71
LRRC28-222	ENST00000561431	ANKRD18B	A2A2Z9	1011 aa		4.39	□□□□□ -1.71
LRRC28-222	ENST00000561431	TBC1D3B	A6NDS4	549 aa		4.39	□□□□□ -1.71
LRRC28-222	ENST00000561431	TBC1D3F	A6NER0	549 aa	Predicted RBP	4.39	□□□□□ -1.71
LRRC28-222	ENST00000561431	TTC34	A8MYJ7	566 aa		4.39	□□□□□ -1.71
LRRC28-222	ENST00000561431	TBC1D3L	B9A6J9	549 aa		4.39	□□□□□ -1.71
LRRC28-222	ENST00000561431		H0Y3Z8	333 aa		4.39	□□□□□ -1.71
LRRC28-222	ENST00000561431	FOXN1	O15353	648 aa		4.39	□□□□□ -1.71
LRRC28-222	ENST00000561431	CTIF	O43310	598 aa	Known RBP	4.39	□□□□□ -1.71
LRRC28-222	ENST00000561431	BBOX1	O75936	387 aa		4.39	□□□□□ -1.71
LRRC28-222	ENST00000561431	DDN	O94850	711 aa	Predicted RBP	4.39	□□□□□ -1.71

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