RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 PRR23AA6NEV1 266 aa10.88□□□□□ -0.67
TPM1-229ENST00000561242 I6L893 689 aaPredicted RBP10.88□□□□□ -0.67
TPM1-229ENST00000561242 DCLK1O15075 740 aa10.88□□□□□ -0.67
TPM1-229ENST00000561242 MATN3O15232 486 aa10.88□□□□□ -0.67
TPM1-229ENST00000561242 CEP104O60308 925 aa10.88□□□□□ -0.67
TPM1-229ENST00000561242 FOXD2O60548 495 aaPredicted RBP10.88□□□□□ -0.67
TPM1-229ENST00000561242 ADAM23O75077 832 aa10.88□□□□□ -0.67
TPM1-229ENST00000561242 LMNAP02545 664 aaKnown RBP10.88□□□□□ -0.67
TPM1-229ENST00000561242 CD48P09326 243 aa10.88□□□□□ -0.67
TPM1-229ENST00000561242 CCNB1P14635 433 aa10.88□□□□□ -0.67
TPM1-229ENST00000561242 GABRG2P18507 467 aa10.88□□□□□ -0.67
TPM1-229ENST00000561242 NDUFV2P19404 249 aa10.88□□□□□ -0.67
TPM1-229ENST00000561242 CCNHP51946 323 aaPredicted RBP10.88□□□□□ -0.67
TPM1-229ENST00000561242 EIF3EP60228 445 aaKnown RBP10.88□□□□□ -0.67
TPM1-229ENST00000561242 AP1S1P61966 158 aa10.88□□□□□ -0.67
TPM1-229ENST00000561242 ZNF33AQ06730 810 aa10.88□□□□□ -0.67
TPM1-229ENST00000561242 NSUN2Q08J23 767 aaKnown RBP eCLIP10.88□□□□□ -0.67
TPM1-229ENST00000561242 HNRNPDQ14103 355 aaKnown RBP10.88□□□□□ -0.67
TPM1-229ENST00000561242 GAS6Q14393 721 aa10.88□□□□□ -0.67
TPM1-229ENST00000561242 LLGL1Q15334 1064 aa10.88□□□□□ -0.67
TPM1-229ENST00000561242 TEAD4Q15561 434 aa10.88□□□□□ -0.67
TPM1-229ENST00000561242 PTPRNQ16849 979 aa10.88□□□□□ -0.67
TPM1-229ENST00000561242 LONRF2Q1L5Z9 754 aa10.88□□□□□ -0.67
TPM1-229ENST00000561242 RALGPS1Q5JS13 557 aa10.88□□□□□ -0.67
TPM1-229ENST00000561242 C9orf64Q5T6V5 341 aa10.88□□□□□ -0.67
TPM1-229ENST00000561242 ITPRIPL1Q6GPH6 555 aa10.88□□□□□ -0.67
TPM1-229ENST00000561242 PKN3Q6P5Z2 889 aa10.88□□□□□ -0.67
TPM1-229ENST00000561242 GDPD4Q6W3E5 623 aa10.88□□□□□ -0.67
TPM1-229ENST00000561242 USP30Q70CQ3 517 aa10.88□□□□□ -0.67
TPM1-229ENST00000561242 PID1Q7Z2X4 250 aa10.88□□□□□ -0.67
TPM1-229ENST00000561242 ZC3H18Q86VM9 953 aaKnown RBP10.88□□□□□ -0.67
TPM1-229ENST00000561242 SFTPA1Q8IWL2 248 aa10.88□□□□□ -0.67
TPM1-229ENST00000561242 ZNF687Q8N1G0 1237 aa10.88□□□□□ -0.67
TPM1-229ENST00000561242 MDGA1Q8NFP4 955 aa10.88□□□□□ -0.67
TPM1-229ENST00000561242 FAM122AQ96E09 287 aa10.88□□□□□ -0.67
TPM1-229ENST00000561242 IFT43Q96FT9 208 aa10.88□□□□□ -0.67
TPM1-229ENST00000561242 FEM1CQ96JP0 617 aa10.88□□□□□ -0.67
TPM1-229ENST00000561242 PDLIM2Q96JY6 352 aa10.88□□□□□ -0.67
TPM1-229ENST00000561242 ZNF641Q96N77 438 aaPredicted RBP10.88□□□□□ -0.67
TPM1-229ENST00000561242 TUBGCP5Q96RT8 1024 aa10.88□□□□□ -0.67
TPM1-229ENST00000561242 PSMB7Q99436 277 aa10.88□□□□□ -0.67
TPM1-229ENST00000561242 VAT1Q99536 393 aa10.88□□□□□ -0.67
TPM1-229ENST00000561242 RSPH9Q9H1X1 276 aaPredicted RBP10.88□□□□□ -0.67
TPM1-229ENST00000561242 PABPC3Q9H361 631 aaKnown RBP10.88□□□□□ -0.67
TPM1-229ENST00000561242 LRRC19Q9H756 370 aa10.88□□□□□ -0.67
TPM1-229ENST00000561242 NT5MQ9NPB1 228 aa10.88□□□□□ -0.67
TPM1-229ENST00000561242 ITM2CQ9NQX7 267 aa10.88□□□□□ -0.67
TPM1-229ENST00000561242 NDFIP2Q9NV92 336 aa10.88□□□□□ -0.67
TPM1-229ENST00000561242 SUSD2Q9UGT4 822 aa10.88□□□□□ -0.67
TPM1-229ENST00000561242 FEZ2Q9UHY8 353 aaPredicted RBP10.88□□□□□ -0.67
TPM1-229ENST00000561242 ARIH1Q9Y4X5 557 aaPredicted RBP10.88□□□□□ -0.67
TPM1-229ENST00000561242 OR51B4Q9Y5P0 310 aa10.88□□□□□ -0.67
TPM1-229ENST00000561242 ZNF638Q14966 1978 aaKnown RBP10.88□□□□□ -0.67
TPM1-229ENST00000561242 A0A1W2PP55 124 aa10.87□□□□□ -0.67
TPM1-229ENST00000561242 A0A1W2PQF6 199 aa10.87□□□□□ -0.67
TPM1-229ENST00000561242 CTAGE9A4FU28 777 aa10.87□□□□□ -0.67
TPM1-229ENST00000561242 SHISA7A6NL88 538 aa10.87□□□□□ -0.67
TPM1-229ENST00000561242 PRR5-ARHGAP8B1AHC4 643 aa10.87□□□□□ -0.67
TPM1-229ENST00000561242 J3KR12 359 aa10.87□□□□□ -0.67
TPM1-229ENST00000561242 APOC4-APOC2K7ER74 178 aa10.87□□□□□ -0.67
TPM1-229ENST00000561242 K7ERQ8 282 aa10.87□□□□□ -0.67
TPM1-229ENST00000561242 MID1O15344 667 aa10.87□□□□□ -0.67
TPM1-229ENST00000561242 SLC7A4O43246 635 aa10.87□□□□□ -0.67
TPM1-229ENST00000561242 FSBPO95073 299 aa10.87□□□□□ -0.67
TPM1-229ENST00000561242 MT-CO1P00395 513 aa10.87□□□□□ -0.67
TPM1-229ENST00000561242 JCHAINP01591 159 aa10.87□□□□□ -0.67
TPM1-229ENST00000561242 APOC2P02655 101 aa10.87□□□□□ -0.67
TPM1-229ENST00000561242 SERPINF2P08697 491 aa10.87□□□□□ -0.67
TPM1-229ENST00000561242 GLDCP23378 1020 aa10.87□□□□□ -0.67
TPM1-229ENST00000561242 CASQ1P31415 396 aa10.87□□□□□ -0.67
TPM1-229ENST00000561242 CDKN2BP42772 138 aa10.87□□□□□ -0.67
TPM1-229ENST00000561242 SUOXP51687 545 aa10.87□□□□□ -0.67
TPM1-229ENST00000561242 NEK3P51956 506 aa10.87□□□□□ -0.67
TPM1-229ENST00000561242 RPS14P62263 151 aaKnown RBP10.87□□□□□ -0.67
TPM1-229ENST00000561242 ARF5P84085 180 aa10.87□□□□□ -0.67
TPM1-229ENST00000561242 LMNB2Q03252 620 aa10.87□□□□□ -0.67
TPM1-229ENST00000561242 ELP6Q0PNE2 266 aa10.87□□□□□ -0.67
TPM1-229ENST00000561242 MESP2Q0VG99 397 aa10.87□□□□□ -0.67
TPM1-229ENST00000561242 GALNT2Q10471 571 aa10.87□□□□□ -0.67
TPM1-229ENST00000561242 ZNF211Q13398 564 aaPredicted RBP10.87□□□□□ -0.67
TPM1-229ENST00000561242 XRCC4Q13426 336 aa10.87□□□□□ -0.67
TPM1-229ENST00000561242 ENPP2Q13822 863 aa10.87□□□□□ -0.67
TPM1-229ENST00000561242 POM121L1PQ3SYA9 428 aa10.87□□□□□ -0.67
TPM1-229ENST00000561242 ZNF805Q5CZA5 627 aa10.87□□□□□ -0.67
TPM1-229ENST00000561242 SPDYCQ5MJ68 293 aa10.87□□□□□ -0.67
TPM1-229ENST00000561242 LYSMD4Q5XG99 296 aa10.87□□□□□ -0.67
TPM1-229ENST00000561242 NCBP2-AS2Q69YL0 99 aa10.87□□□□□ -0.67
TPM1-229ENST00000561242 KIAA1211LQ6NV74 962 aa10.87□□□□□ -0.67
TPM1-229ENST00000561242 DPY19L3Q6ZPD9 716 aa10.87□□□□□ -0.67
TPM1-229ENST00000561242 CYP2U1Q7Z449 544 aa10.87□□□□□ -0.67
TPM1-229ENST00000561242 SRLQ86TD4 932 aa10.87□□□□□ -0.67
TPM1-229ENST00000561242 ZSCAN30Q86W11 494 aa10.87□□□□□ -0.67
TPM1-229ENST00000561242 RASSF3Q86WH2 238 aa10.87□□□□□ -0.67
TPM1-229ENST00000561242 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.87□□□□□ -0.67
TPM1-229ENST00000561242 GPR161Q8N6U8 529 aaKnown RBP10.87□□□□□ -0.67
TPM1-229ENST00000561242 PLD5Q8N7P1 536 aa10.87□□□□□ -0.67
TPM1-229ENST00000561242 CCDC89Q8N998 374 aa10.87□□□□□ -0.67
TPM1-229ENST00000561242 C12orf50Q8NA57 414 aaPredicted RBP10.87□□□□□ -0.67
TPM1-229ENST00000561242 FAM71BQ8TC56 605 aa10.87□□□□□ -0.67
TPM1-229ENST00000561242 CXorf40AQ8TE69 158 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms