RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 C1orf232A0A0U1RR37 186 aa16.71■□□□□ 0.27
TPM1-228ENST00000560975 MAFGO15525 162 aa16.71■□□□□ 0.27
TPM1-228ENST00000560975 MFSD11O43934 449 aa16.71■□□□□ 0.27
TPM1-228ENST00000560975 MT-CO1P00395 513 aa16.71■□□□□ 0.27
TPM1-228ENST00000560975 PFKMP08237 780 aa16.71■□□□□ 0.27
TPM1-228ENST00000560975 GJA8P48165 433 aa16.71■□□□□ 0.27
TPM1-228ENST00000560975 ZNF460Q14592 562 aa16.71■□□□□ 0.27
TPM1-228ENST00000560975 ZNF362Q5T0B9 420 aaPredicted RBP16.71■□□□□ 0.27
TPM1-228ENST00000560975 ANKRD26P1Q6NSI1 321 aa16.71■□□□□ 0.27
TPM1-228ENST00000560975 SIX6OS1Q8N1H7 587 aa16.71■□□□□ 0.27
TPM1-228ENST00000560975 NSUN6Q8TEA1 469 aaKnown RBP16.71■□□□□ 0.27
TPM1-228ENST00000560975 VPS39Q96JC1 886 aa16.71■□□□□ 0.27
TPM1-228ENST00000560975 TSNARE1Q96NA8 513 aa16.71■□□□□ 0.27
TPM1-228ENST00000560975 PDZD7Q9H5P4 517 aa16.71■□□□□ 0.27
TPM1-228ENST00000560975 SOX17Q9H6I2 414 aaPredicted RBP16.71■□□□□ 0.27
TPM1-228ENST00000560975 VTI1BQ9UEU0 232 aa16.71■□□□□ 0.27
TPM1-228ENST00000560975 FADS3Q9Y5Q0 445 aa16.71■□□□□ 0.27
TPM1-228ENST00000560975 EP400Q96L91 3159 aa16.71■□□□□ 0.27
TPM1-228ENST00000560975 TCRBV3S1A0A5B6 114 aa16.71■□□□□ 0.27
TPM1-228ENST00000560975 FAM155AB1AL88 458 aaPredicted RBP16.71■□□□□ 0.27
TPM1-228ENST00000560975 GJB1P08034 283 aa16.71■□□□□ 0.27
TPM1-228ENST00000560975 INHBBP09529 407 aa16.71■□□□□ 0.27
TPM1-228ENST00000560975 HNRNPLP14866 589 aaKnown RBP eCLIP16.71■□□□□ 0.271e-7■■□□□ 12.2
TPM1-228ENST00000560975 ADSLP30566 484 aaPredicted RBP16.71■□□□□ 0.27
TPM1-228ENST00000560975 GRM3Q14832 879 aa16.71■□□□□ 0.27
TPM1-228ENST00000560975 OLFML1Q6UWY5 402 aa16.71■□□□□ 0.27
TPM1-228ENST00000560975 KCTD8Q6ZWB6 473 aa16.71■□□□□ 0.27
TPM1-228ENST00000560975 TTC30AQ86WT1 665 aa16.71■□□□□ 0.27
TPM1-228ENST00000560975 TP53INP2Q8IXH6 220 aa16.71■□□□□ 0.27
TPM1-228ENST00000560975 CLEC4CQ8WTT0 213 aa16.71■□□□□ 0.27
TPM1-228ENST00000560975 KHSRPQ92945 711 aaKnown RBP eCLIP16.71■□□□□ 0.274e-9■□□□□ 9.5
TPM1-228ENST00000560975 TCF12Q99081 682 aa16.71■□□□□ 0.27
TPM1-228ENST00000560975 NAT9Q9BTE0 207 aa16.71■□□□□ 0.27
TPM1-228ENST00000560975 MAFBQ9Y5Q3 323 aaPredicted RBP16.71■□□□□ 0.27
TPM1-228ENST00000560975 KCNK1O00180 336 aa16.71■□□□□ 0.26
TPM1-228ENST00000560975 DLGAP1O14490 977 aa16.71■□□□□ 0.26
TPM1-228ENST00000560975 SDHDO14521 159 aa16.71■□□□□ 0.26
TPM1-228ENST00000560975 TRIM24O15164 1050 aa16.71■□□□□ 0.26
TPM1-228ENST00000560975 NR2C2P49116 596 aa16.71■□□□□ 0.26
TPM1-228ENST00000560975 IFRD2Q12894 506 aaPredicted RBP16.71■□□□□ 0.26
TPM1-228ENST00000560975 C6orf10Q5SRN2 563 aa16.71■□□□□ 0.26
TPM1-228ENST00000560975 LDLRAP1Q5SW96 308 aa16.71■□□□□ 0.26
TPM1-228ENST00000560975 GALNT18Q6P9A2 607 aa16.71■□□□□ 0.26
TPM1-228ENST00000560975 PID1Q7Z2X4 250 aa16.71■□□□□ 0.26
TPM1-228ENST00000560975 DHFR2Q86XF0 187 aa16.71■□□□□ 0.26
TPM1-228ENST00000560975 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.71■□□□□ 0.26
TPM1-228ENST00000560975 HMGCLL1Q8TB92 370 aa16.71■□□□□ 0.26
TPM1-228ENST00000560975 IL1RL2Q9HB29 575 aa16.71■□□□□ 0.26
TPM1-228ENST00000560975 TUBA8Q9NY65 449 aaPredicted RBP16.71■□□□□ 0.26
TPM1-228ENST00000560975 MAP4P27816 1152 aaKnown RBP16.7■□□□□ 0.26
TPM1-228ENST00000560975 SLC7A2P52569 658 aa16.7■□□□□ 0.26
TPM1-228ENST00000560975 MERTKQ12866 999 aa16.7■□□□□ 0.26
TPM1-228ENST00000560975 LRP8Q14114 963 aa16.7■□□□□ 0.26
TPM1-228ENST00000560975 FASTKQ14296 549 aaKnown RBP16.7■□□□□ 0.26
TPM1-228ENST00000560975 PPP1R3AQ16821 1122 aa16.7■□□□□ 0.26
TPM1-228ENST00000560975 TMEM151AQ8N4L1 468 aa16.7■□□□□ 0.26
TPM1-228ENST00000560975 TNIP2Q8NFZ5 429 aa16.7■□□□□ 0.26
TPM1-228ENST00000560975 CHPT1Q8WUD6 406 aa16.7■□□□□ 0.26
TPM1-228ENST00000560975 ISL2Q96A47 359 aa16.7■□□□□ 0.26
TPM1-228ENST00000560975 RPAP3Q9H6T3 665 aaPredicted RBP16.7■□□□□ 0.26
TPM1-228ENST00000560975 SPAG4Q9NPE6 437 aa16.7■□□□□ 0.26
TPM1-228ENST00000560975 SYNJ2BP-COX16A0A087WUM0 186 aa16.7■□□□□ 0.26
TPM1-228ENST00000560975 YDJCA8MPS7 323 aa16.7■□□□□ 0.26
TPM1-228ENST00000560975 CFAP99D6REC4 459 aa16.7■□□□□ 0.26
TPM1-228ENST00000560975 INO80B-WBP1J3KQ70 363 aa16.7■□□□□ 0.26
TPM1-228ENST00000560975 ZNF701M0R085 212 aaPredicted RBP16.7■□□□□ 0.26
TPM1-228ENST00000560975 TPH1P17752 444 aa16.7■□□□□ 0.26
TPM1-228ENST00000560975 ATP6V1B2P21281 511 aa16.7■□□□□ 0.26
TPM1-228ENST00000560975 NME5P56597 212 aa16.7■□□□□ 0.26
TPM1-228ENST00000560975 USP10Q14694 798 aaKnown RBP16.7■□□□□ 0.26
TPM1-228ENST00000560975 DPYSL2Q16555 572 aa16.7■□□□□ 0.26
TPM1-228ENST00000560975 RGS21Q2M5E4 152 aa16.7■□□□□ 0.26
TPM1-228ENST00000560975 TBCELQ5QJ74 424 aa16.7■□□□□ 0.26
TPM1-228ENST00000560975 CERCAMQ5T4B2 595 aa16.7■□□□□ 0.26
TPM1-228ENST00000560975 SNRNP48Q6IEG0 339 aaKnown RBP16.7■□□□□ 0.26
TPM1-228ENST00000560975 NIPAL1Q6NVV3 410 aa16.7■□□□□ 0.26
TPM1-228ENST00000560975 ZNF567Q8N184 647 aa16.7■□□□□ 0.26
TPM1-228ENST00000560975 FSTL5Q8N475 847 aaPredicted RBP16.7■□□□□ 0.26
TPM1-228ENST00000560975 OR9I1Q8NGQ6 314 aa16.7■□□□□ 0.26
TPM1-228ENST00000560975 LRRC40Q9H9A6 602 aa16.7■□□□□ 0.26
TPM1-228ENST00000560975 RPF1Q9H9Y2 349 aaKnown RBP16.7■□□□□ 0.26
TPM1-228ENST00000560975 TMPRSS4Q9NRS4 437 aa16.7■□□□□ 0.26
TPM1-228ENST00000560975 GID8Q9NWU2 228 aa16.7■□□□□ 0.26
TPM1-228ENST00000560975 COX16Q9P0S2 106 aa16.7■□□□□ 0.26
TPM1-228ENST00000560975 RBMX2Q9Y388 322 aaKnown RBP16.7■□□□□ 0.26
TPM1-228ENST00000560975 CLOCKO15516 846 aa16.69■□□□□ 0.26
TPM1-228ENST00000560975 DLX3O60479 287 aa16.69■□□□□ 0.26
TPM1-228ENST00000560975 KCNH1O95259 989 aa16.69■□□□□ 0.26
TPM1-228ENST00000560975 DCKP27707 260 aa16.69■□□□□ 0.26
TPM1-228ENST00000560975 SLC6A3Q01959 620 aa16.69■□□□□ 0.26
TPM1-228ENST00000560975 STX5Q13190 355 aa16.69■□□□□ 0.26
TPM1-228ENST00000560975 MOGQ16653 247 aa16.69■□□□□ 0.26
TPM1-228ENST00000560975 MAP7D1Q3KQU3 841 aa16.69■□□□□ 0.26
TPM1-228ENST00000560975 JADE1Q6IE81 842 aa16.69■□□□□ 0.26
TPM1-228ENST00000560975 RPS27LQ71UM5 84 aaKnown RBP16.69■□□□□ 0.26
TPM1-228ENST00000560975 EPHX4Q8IUS5 362 aa16.69■□□□□ 0.26
TPM1-228ENST00000560975 ANKFN1Q8N957 763 aa16.69■□□□□ 0.26
TPM1-228ENST00000560975 KDM1BQ8NB78 822 aa16.69■□□□□ 0.26
TPM1-228ENST00000560975 IL22Q9GZX6 179 aa16.69■□□□□ 0.26
TPM1-228ENST00000560975 UPF3AQ9H1J1 476 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms