RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 ZFYVE27Q5T4F4 411 aa13.21□□□□□ -0.29
CTDSPL2-209ENST00000560620 FBXL19Q6PCT2 694 aa13.21□□□□□ -0.29
CTDSPL2-209ENST00000560620 H2AFVQ71UI9 128 aa13.21□□□□□ -0.29
CTDSPL2-209ENST00000560620 PSTKQ8IV42 348 aaKnown RBP13.21□□□□□ -0.29
CTDSPL2-209ENST00000560620 UMODL1-AS1Q8N2C9 162 aa13.21□□□□□ -0.29
CTDSPL2-209ENST00000560620 ZNF564Q8TBZ8 553 aaPredicted RBP13.21□□□□□ -0.29
CTDSPL2-209ENST00000560620 ZDHHC5Q9C0B5 715 aa13.21□□□□□ -0.29
CTDSPL2-209ENST00000560620 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.21□□□□□ -0.29
CTDSPL2-209ENST00000560620 A0A1W2PPC4 97 aa13.2□□□□□ -0.3
CTDSPL2-209ENST00000560620 SSU72P8A0A1W2PR75 194 aa13.2□□□□□ -0.3
CTDSPL2-209ENST00000560620 ARHGAP42A6NI28 874 aa13.2□□□□□ -0.3
CTDSPL2-209ENST00000560620 TMEM110-MUSTN1A8MSY1 372 aa13.2□□□□□ -0.3
CTDSPL2-209ENST00000560620 WASH4PA8MWX3 477 aa13.2□□□□□ -0.3
CTDSPL2-209ENST00000560620 H3BRJ5 948 aa13.2□□□□□ -0.3
CTDSPL2-209ENST00000560620 PLRG1O43660 514 aaKnown RBP13.2□□□□□ -0.3
CTDSPL2-209ENST00000560620 TMCC1O94876 653 aa13.2□□□□□ -0.3
CTDSPL2-209ENST00000560620 PCDH8O95206 1070 aa13.2□□□□□ -0.3
CTDSPL2-209ENST00000560620 TCF4P15884 667 aa13.2□□□□□ -0.3
CTDSPL2-209ENST00000560620 ERCC2P18074 760 aa13.2□□□□□ -0.3
CTDSPL2-209ENST00000560620 NDST2P52849 883 aa13.2□□□□□ -0.3
CTDSPL2-209ENST00000560620 C21orf59P57076 290 aa13.2□□□□□ -0.3
CTDSPL2-209ENST00000560620 PPP2CBP62714 309 aa13.2□□□□□ -0.3
CTDSPL2-209ENST00000560620 PPP2CAP67775 309 aa13.2□□□□□ -0.3
CTDSPL2-209ENST00000560620 FOXK2Q01167 660 aa13.2□□□□□ -0.3
CTDSPL2-209ENST00000560620 KRT81Q14533 505 aa13.2□□□□□ -0.3
CTDSPL2-209ENST00000560620 HADHQ16836 314 aaKnown RBP13.2□□□□□ -0.3
CTDSPL2-209ENST00000560620 ATXN7L2Q5T6C5 722 aaPredicted RBP13.2□□□□□ -0.3
CTDSPL2-209ENST00000560620 AGBL4Q5VU57 503 aa13.2□□□□□ -0.3
CTDSPL2-209ENST00000560620 PSAPL1Q6NUJ1 521 aa13.2□□□□□ -0.3
CTDSPL2-209ENST00000560620 SARM1Q6SZW1 724 aa13.2□□□□□ -0.3
CTDSPL2-209ENST00000560620 LAYNQ6UX15 382 aa13.2□□□□□ -0.3
CTDSPL2-209ENST00000560620 PRPF39Q86UA1 669 aaKnown RBP13.2□□□□□ -0.3
CTDSPL2-209ENST00000560620 NETO2Q8NC67 525 aa13.2□□□□□ -0.3
CTDSPL2-209ENST00000560620 OR2AP1Q8NGE2 309 aa13.2□□□□□ -0.3
CTDSPL2-209ENST00000560620 ISG20Q96AZ6 181 aaKnown RBP13.2□□□□□ -0.3
CTDSPL2-209ENST00000560620 SKA1Q96BD8 255 aa13.2□□□□□ -0.3
CTDSPL2-209ENST00000560620 SERAC1Q96JX3 654 aa13.2□□□□□ -0.3
CTDSPL2-209ENST00000560620 CHP1Q99653 195 aa13.2□□□□□ -0.3
CTDSPL2-209ENST00000560620 PACSIN1Q9BY11 444 aa13.2□□□□□ -0.3
CTDSPL2-209ENST00000560620 KLC2Q9H0B6 622 aa13.2□□□□□ -0.3
CTDSPL2-209ENST00000560620 KDM4CQ9H3R0 1056 aa13.2□□□□□ -0.3
CTDSPL2-209ENST00000560620 NOL6Q9H6R4 1146 aaKnown RBP13.2□□□□□ -0.3
CTDSPL2-209ENST00000560620 GAREM1Q9H706 876 aa13.2□□□□□ -0.3
CTDSPL2-209ENST00000560620 NHEJ1Q9H9Q4 299 aaPredicted RBP13.2□□□□□ -0.3
CTDSPL2-209ENST00000560620 SPTLC3Q9NUV7 552 aa13.2□□□□□ -0.3
CTDSPL2-209ENST00000560620 CWC15Q9P013 229 aaKnown RBP13.2□□□□□ -0.3
CTDSPL2-209ENST00000560620 UBA2Q9UBT2 640 aaPredicted RBP13.2□□□□□ -0.3
CTDSPL2-209ENST00000560620 SLCO1B1Q9Y6L6 691 aa13.2□□□□□ -0.3
CTDSPL2-209ENST00000560620 DNAH14Q0VDD8 3507 aa13.19□□□□□ -0.3
CTDSPL2-209ENST00000560620 CXorf51AA0A1B0GTR3 108 aa13.19□□□□□ -0.3
CTDSPL2-209ENST00000560620 MED19A0JLT2 244 aaPredicted RBP13.19□□□□□ -0.3
CTDSPL2-209ENST00000560620 ZNF821O75541 412 aaPredicted RBP13.19□□□□□ -0.3
CTDSPL2-209ENST00000560620 POP4O95707 220 aaKnown RBP13.19□□□□□ -0.3
CTDSPL2-209ENST00000560620 CER1O95813 267 aa13.19□□□□□ -0.3
CTDSPL2-209ENST00000560620 CD160O95971 181 aa13.19□□□□□ -0.3
CTDSPL2-209ENST00000560620 IGSF6O95976 241 aa13.19□□□□□ -0.3
CTDSPL2-209ENST00000560620 RARAP10276 462 aa13.19□□□□□ -0.3
CTDSPL2-209ENST00000560620 IL1R2P27930 398 aa13.19□□□□□ -0.3
CTDSPL2-209ENST00000560620 GKP32189 559 aa13.19□□□□□ -0.3
CTDSPL2-209ENST00000560620 PAPOLAP51003 745 aaKnown RBP13.19□□□□□ -0.3
CTDSPL2-209ENST00000560620 NOVA1P51513 510 aaKnown RBP13.19□□□□□ -0.3
CTDSPL2-209ENST00000560620 CCR5P51681 352 aa13.19□□□□□ -0.3
CTDSPL2-209ENST00000560620 NEK3P51956 506 aa13.19□□□□□ -0.3
CTDSPL2-209ENST00000560620 ZNF135P52742 658 aaPredicted RBP13.19□□□□□ -0.3
CTDSPL2-209ENST00000560620 RACK1P63244 317 aaKnown RBP13.19□□□□□ -0.3
CTDSPL2-209ENST00000560620 RAD51Q06609 339 aa13.19□□□□□ -0.3
CTDSPL2-209ENST00000560620 MAPK8IP2Q13387 824 aaPredicted RBP13.19□□□□□ -0.3
CTDSPL2-209ENST00000560620 SLC45A4Q5BKX6 768 aa13.19□□□□□ -0.3
CTDSPL2-209ENST00000560620 IL27RAQ6UWB1 636 aa13.19□□□□□ -0.3
CTDSPL2-209ENST00000560620 CYP4V2Q6ZWL3 525 aaPredicted RBP13.19□□□□□ -0.3
CTDSPL2-209ENST00000560620 ERN2Q76MJ5 926 aaKnown RBP13.19□□□□□ -0.3
CTDSPL2-209ENST00000560620 PAF1Q8N7H5 531 aa13.19□□□□□ -0.3
CTDSPL2-209ENST00000560620 NIPA2Q8N8Q9 360 aa13.19□□□□□ -0.3
CTDSPL2-209ENST00000560620 CASKIN2Q8WXE0 1202 aa13.19□□□□□ -0.3
CTDSPL2-209ENST00000560620 ARRDC3Q96B67 414 aa13.19□□□□□ -0.3
CTDSPL2-209ENST00000560620 GDAP1L1Q96MZ0 367 aa13.19□□□□□ -0.3
CTDSPL2-209ENST00000560620 SLC6A18Q96N87 628 aa13.19□□□□□ -0.3
CTDSPL2-209ENST00000560620 SLC39A8Q9C0K1 460 aa13.19□□□□□ -0.3
CTDSPL2-209ENST00000560620 RBSNQ9H1K0 784 aa13.19□□□□□ -0.3
CTDSPL2-209ENST00000560620 SLC32A1Q9H598 525 aa13.19□□□□□ -0.3
CTDSPL2-209ENST00000560620 SP110Q9HB58 689 aa13.19□□□□□ -0.3
CTDSPL2-209ENST00000560620 PREBQ9HCU5 417 aa13.19□□□□□ -0.3
CTDSPL2-209ENST00000560620 UVRAGQ9P2Y5 699 aa13.19□□□□□ -0.3
CTDSPL2-209ENST00000560620 TPX2Q9ULW0 747 aaKnown RBP13.19□□□□□ -0.3
CTDSPL2-209ENST00000560620 ANKRD6Q9Y2G4 727 aa13.19□□□□□ -0.3
CTDSPL2-209ENST00000560620 WASF2Q9Y6W5 498 aa13.19□□□□□ -0.3
CTDSPL2-209ENST00000560620 CHD5Q8TDI0 1954 aa13.18□□□□□ -0.3
CTDSPL2-209ENST00000560620 J3KR12 359 aa13.18□□□□□ -0.3
CTDSPL2-209ENST00000560620 NEMP1O14524 444 aa13.18□□□□□ -0.3
CTDSPL2-209ENST00000560620 RNGTTO60942 597 aaKnown RBP13.18□□□□□ -0.3
CTDSPL2-209ENST00000560620 PALMO75781 387 aa13.18□□□□□ -0.3
CTDSPL2-209ENST00000560620 KCNK5O95279 499 aa13.18□□□□□ -0.3
CTDSPL2-209ENST00000560620 GSRP00390 522 aa13.18□□□□□ -0.3
CTDSPL2-209ENST00000560620 UGT2B4P06133 528 aa13.18□□□□□ -0.3
CTDSPL2-209ENST00000560620 TMEM253P0C7T8 217 aa13.18□□□□□ -0.3
CTDSPL2-209ENST00000560620 ITGB7P26010 798 aa13.18□□□□□ -0.3
CTDSPL2-209ENST00000560620 GRIA4P48058 902 aa13.18□□□□□ -0.3
CTDSPL2-209ENST00000560620 HCAR3P49019 387 aa13.18□□□□□ -0.3
CTDSPL2-209ENST00000560620 CDH6P55285 790 aa13.18□□□□□ -0.3
CTDSPL2-209ENST00000560620 DPYSL2Q16555 572 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms