RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 TEAD2Q15562 447 aa11.04□□□□□ -0.64
SNRPA1-211ENST00000560433 SLC1A5Q15758 541 aa11.04□□□□□ -0.64
SNRPA1-211ENST00000560433 ZSCAN26Q16670 478 aa11.04□□□□□ -0.64
SNRPA1-211ENST00000560433 PARP15Q460N3 678 aa11.04□□□□□ -0.64
SNRPA1-211ENST00000560433 PABPC1LQ4VXU2 614 aaKnown RBP11.04□□□□□ -0.64
SNRPA1-211ENST00000560433 HSP90AA5PQ58FG0 334 aa11.04□□□□□ -0.64
SNRPA1-211ENST00000560433 NAPEPLDQ6IQ20 393 aa11.04□□□□□ -0.64
SNRPA1-211ENST00000560433 POTEHQ6S545 545 aa11.04□□□□□ -0.64
SNRPA1-211ENST00000560433 CCDC149Q6ZUS6 474 aa11.04□□□□□ -0.64
SNRPA1-211ENST00000560433 ADGRD2Q7Z7M1 963 aa11.04□□□□□ -0.64
SNRPA1-211ENST00000560433 ELMOD1Q8N336 334 aa11.04□□□□□ -0.64
SNRPA1-211ENST00000560433 ZNF276Q8N554 614 aa11.04□□□□□ -0.64
SNRPA1-211ENST00000560433 C12orf76Q8N812 135 aaPredicted RBP11.04□□□□□ -0.64
SNRPA1-211ENST00000560433 ING5Q8WYH8 240 aa11.04□□□□□ -0.64
SNRPA1-211ENST00000560433 SMIM14Q96QK8 99 aa11.04□□□□□ -0.64
SNRPA1-211ENST00000560433 CCT8L2Q96SF2 557 aa11.04□□□□□ -0.64
SNRPA1-211ENST00000560433 SEMA3CQ99985 751 aa11.04□□□□□ -0.64
SNRPA1-211ENST00000560433 SLC13A1Q9BZW2 595 aa11.04□□□□□ -0.64
SNRPA1-211ENST00000560433 EPN3Q9H201 632 aa11.04□□□□□ -0.64
SNRPA1-211ENST00000560433 SLC17A7Q9P2U7 560 aa11.04□□□□□ -0.64
SNRPA1-211ENST00000560433 DNMT3BQ9UBC3 853 aaKnown RBP11.04□□□□□ -0.64
SNRPA1-211ENST00000560433 SSX2IPQ9Y2D8 614 aa11.04□□□□□ -0.64
SNRPA1-211ENST00000560433 ZCWPW2A0A1B0GU75 182 aa11.04□□□□□ -0.64
SNRPA1-211ENST00000560433 BUD23O43709 281 aaKnown RBP11.04□□□□□ -0.64
SNRPA1-211ENST00000560433 PRAMEF11O60813 436 aa11.04□□□□□ -0.64
SNRPA1-211ENST00000560433 SPAG6O75602 509 aa11.04□□□□□ -0.64
SNRPA1-211ENST00000560433 MT-ND3P03897 115 aa11.04□□□□□ -0.64
SNRPA1-211ENST00000560433 MAPKAPK2P49137 400 aa11.04□□□□□ -0.64
SNRPA1-211ENST00000560433 WDR4P57081 412 aaKnown RBP11.04□□□□□ -0.64
SNRPA1-211ENST00000560433 CREMQ03060 361 aa11.04□□□□□ -0.64
SNRPA1-211ENST00000560433 IL10RBQ08334 325 aa11.04□□□□□ -0.64
SNRPA1-211ENST00000560433 DMTNQ08495 405 aa11.04□□□□□ -0.64
SNRPA1-211ENST00000560433 ZNF235Q14590 738 aa11.04□□□□□ -0.64
SNRPA1-211ENST00000560433 ANKRD20A4Q4UJ75 823 aa11.04□□□□□ -0.64
SNRPA1-211ENST00000560433 CXorf57Q6NSI4 855 aaKnown RBP11.04□□□□□ -0.64
SNRPA1-211ENST00000560433 RASSF3Q86WH2 238 aa11.04□□□□□ -0.64
SNRPA1-211ENST00000560433 DDI1Q8WTU0 396 aa11.04□□□□□ -0.64
SNRPA1-211ENST00000560433 NSMCE1Q8WV22 266 aa11.04□□□□□ -0.64
SNRPA1-211ENST00000560433 SPOCK2Q92563 424 aa11.04□□□□□ -0.64
SNRPA1-211ENST00000560433 TMA16Q96EY4 203 aaKnown RBP11.04□□□□□ -0.64
SNRPA1-211ENST00000560433 GBF1Q92538 1859 aa11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 MIA3Q5JRA6 1907 aa11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 A0A0U1RQS6 177 aa11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 GMNCA6NCL1 334 aa11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 FAM47DPA6NHR8 397 aa11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 CLDN11O75508 207 aa11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 ANXA9O76027 345 aa11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 TSHRP16473 764 aa11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 ADRA1AP35348 466 aa11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 PPP3CCP48454 512 aa11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 SCNN1BP51168 640 aa11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 OXCT1P55809 520 aa11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 GALNT3Q14435 633 aa11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 PTPRRQ15256 657 aa11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 ZKSCAN8Q15776 578 aaPredicted RBP11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 C5orf22Q49AR2 442 aa11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 GPR158Q5T848 1215 aa11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 STEAP4Q687X5 459 aa11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 ESRP1Q6NXG1 681 aaKnown RBP11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 CDHR3Q6ZTQ4 885 aa11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 GRASPQ7Z6J2 395 aaPredicted RBP11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 SHKBP1Q8TBC3 707 aa11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 ARRDC2Q8TBH0 407 aa11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 PHOSPHO2Q8TCD6 241 aa11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 TCP10LQ8TDR4 215 aa11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 IMP4Q96G21 291 aaKnown RBP11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 CERS2Q96G23 380 aa11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 PKNOX2Q96KN3 472 aa11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 SLC25A51Q9H1U9 297 aa11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 PDFQ9HBH1 243 aa11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 C20orf96Q9NUD7 363 aaPredicted RBP11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 ZFATQ9P243 1243 aa11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 CDH22Q9UJ99 828 aa11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 YBX2Q9Y2T7 364 aaKnown RBP11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 SH3BP1Q9Y3L3 701 aa11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 IRAK3Q9Y616 596 aa11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 DENND4CQ5VZ89 1909 aa11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 NOTCH4Q99466 2003 aa11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 IQANK1A0A1B0GTG1 560 aa11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 A0A1B0GVM2 712 aa11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 TCAF2A6NFQ2 919 aa11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 ERI2A8K979 691 aaKnown RBP11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 LEFTY2O00292 366 aa11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 TYROBPO43914 113 aa11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 OLFM2O95897 454 aa11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 MT-CO1P00395 513 aa11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 RHOP08100 348 aa11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 VIMP08670 466 aaKnown RBP11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 GEMP55040 296 aa11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 YBEYP58557 167 aaPredicted RBP11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 PTPRCAPQ14761 206 aa11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 TTC39BQ5VTQ0 682 aaPredicted RBP11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 KDELC1Q6UW63 502 aa11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 RANBP10Q6VN20 620 aa11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 TMEM135Q86UB9 458 aa11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 LRRC49Q8IUZ0 686 aa11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 LRRC34Q8IZ02 419 aa11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 ZSWIM3Q96MP5 696 aa11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 APOL5Q9BWW9 433 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms