RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 PIGZQ86VD9 579 aa9.54□□□□□ -0.88
SMAD3-215ENST00000560424 SIX6OS1Q8N1H7 587 aa9.54□□□□□ -0.88
SMAD3-215ENST00000560424 EHBP1Q8NDI1 1231 aa9.54□□□□□ -0.88
SMAD3-215ENST00000560424 FBXL13Q8NEE6 735 aa9.54□□□□□ -0.88
SMAD3-215ENST00000560424 OR13H1Q8NG92 308 aa9.54□□□□□ -0.88
SMAD3-215ENST00000560424 ZNF564Q8TBZ8 553 aaPredicted RBP9.54□□□□□ -0.88
SMAD3-215ENST00000560424 CPLX3Q8WVH0 158 aa9.54□□□□□ -0.88
SMAD3-215ENST00000560424 KLK6Q92876 244 aa9.54□□□□□ -0.88
SMAD3-215ENST00000560424 PTPRN2Q92932 1015 aa9.54□□□□□ -0.88
SMAD3-215ENST00000560424 RNF34Q969K3 372 aa9.54□□□□□ -0.88
SMAD3-215ENST00000560424 IFT43Q96FT9 208 aa9.54□□□□□ -0.88
SMAD3-215ENST00000560424 FAXDC2Q96IV6 333 aa9.54□□□□□ -0.88
SMAD3-215ENST00000560424 RPL10LQ96L21 214 aaKnown RBP9.54□□□□□ -0.88
SMAD3-215ENST00000560424 PCMTD1Q96MG8 357 aaPredicted RBP9.54□□□□□ -0.88
SMAD3-215ENST00000560424 IL12RB2Q99665 862 aa9.54□□□□□ -0.88
SMAD3-215ENST00000560424 STK33Q9BYT3 514 aa9.54□□□□□ -0.88
SMAD3-215ENST00000560424 ULBP1Q9BZM6 244 aa9.54□□□□□ -0.88
SMAD3-215ENST00000560424 UBXN6Q9BZV1 441 aa9.54□□□□□ -0.88
SMAD3-215ENST00000560424 EPN3Q9H201 632 aa9.54□□□□□ -0.88
SMAD3-215ENST00000560424 CYP3A43Q9HB55 503 aa9.54□□□□□ -0.88
SMAD3-215ENST00000560424 EPB41L5Q9HCM4 733 aa9.54□□□□□ -0.88
SMAD3-215ENST00000560424 PREBQ9HCU5 417 aa9.54□□□□□ -0.88
SMAD3-215ENST00000560424 ABCC13Q9NSE7 274 aa9.54□□□□□ -0.88
SMAD3-215ENST00000560424 GEMIN8Q9NWZ8 242 aaKnown RBP9.54□□□□□ -0.88
SMAD3-215ENST00000560424 IPO11Q9UI26 975 aaKnown RBP9.54□□□□□ -0.88
SMAD3-215ENST00000560424 SLCO3A1Q9UIG8 710 aa9.54□□□□□ -0.88
SMAD3-215ENST00000560424 BZW2Q9Y6E2 419 aaKnown RBP9.54□□□□□ -0.88
SMAD3-215ENST00000560424 NYNRINQ9P2P1 1898 aaKnown RBP9.53□□□□□ -0.88
SMAD3-215ENST00000560424 PMS2P1A4D2B8 440 aa9.53□□□□□ -0.88
SMAD3-215ENST00000560424 EME2A4GXA9 379 aaPredicted RBP9.53□□□□□ -0.88
SMAD3-215ENST00000560424 GOLGA6L9A6NEM1 432 aa9.53□□□□□ -0.88
SMAD3-215ENST00000560424 LRRC53A6NM62 1247 aa9.53□□□□□ -0.88
SMAD3-215ENST00000560424 A6NNZ2 444 aa9.53□□□□□ -0.88
SMAD3-215ENST00000560424 C10orf142B7Z368 130 aa9.53□□□□□ -0.88
SMAD3-215ENST00000560424 TMX2-CTNND1H3BSU7 103 aa9.53□□□□□ -0.88
SMAD3-215ENST00000560424 MUSKO15146 869 aa9.53□□□□□ -0.88
SMAD3-215ENST00000560424 ACSL4O60488 711 aa9.53□□□□□ -0.88
SMAD3-215ENST00000560424 ASS1P00966 412 aaKnown RBP9.53□□□□□ -0.88
SMAD3-215ENST00000560424 TUBB4AP04350 444 aa9.53□□□□□ -0.88
SMAD3-215ENST00000560424 JMJD7P0C870 316 aa9.53□□□□□ -0.88
SMAD3-215ENST00000560424 HNRNPA2B1P22626 353 aaKnown RBP9.53□□□□□ -0.88
SMAD3-215ENST00000560424 CLCN1P35523 988 aa9.53□□□□□ -0.88
SMAD3-215ENST00000560424 PRKCIP41743 596 aa9.53□□□□□ -0.88
SMAD3-215ENST00000560424 CTSOP43234 321 aaPredicted RBP9.53□□□□□ -0.88
SMAD3-215ENST00000560424 GCLMP48507 274 aa9.53□□□□□ -0.88
SMAD3-215ENST00000560424 TGIF1Q15583 401 aa9.53□□□□□ -0.88
SMAD3-215ENST00000560424 IGFBP7Q16270 282 aa9.53□□□□□ -0.88
SMAD3-215ENST00000560424 SKIDA1Q1XH10 827 aa9.53□□□□□ -0.88
SMAD3-215ENST00000560424 DEFB133Q30KQ1 61 aa9.53□□□□□ -0.88
SMAD3-215ENST00000560424 ACCSLQ4AC99 568 aa9.53□□□□□ -0.88
SMAD3-215ENST00000560424 RAB41Q5JT25 222 aa9.53□□□□□ -0.88
SMAD3-215ENST00000560424 BSPRYQ5W0U4 402 aa9.53□□□□□ -0.88
SMAD3-215ENST00000560424 E4F1Q66K89 784 aaPredicted RBP9.53□□□□□ -0.88
SMAD3-215ENST00000560424 MMS22LQ6ZRQ5 1243 aa9.53□□□□□ -0.88
SMAD3-215ENST00000560424 ZNF662Q6ZS27 426 aa9.53□□□□□ -0.88
SMAD3-215ENST00000560424 ENOSF1Q7L5Y1 443 aa9.53□□□□□ -0.88
SMAD3-215ENST00000560424 RAB11FIP2Q7L804 512 aa9.53□□□□□ -0.88
SMAD3-215ENST00000560424 DCP2Q8IU60 420 aaKnown RBP9.53□□□□□ -0.88
SMAD3-215ENST00000560424 CCAR2Q8N163 923 aaKnown RBP9.53□□□□□ -0.88
SMAD3-215ENST00000560424 TMEM145Q8NBT3 493 aa9.53□□□□□ -0.88
SMAD3-215ENST00000560424 ZNF548Q8NEK5 533 aaPredicted RBP9.53□□□□□ -0.88
SMAD3-215ENST00000560424 FAM174AQ8TBP5 190 aa9.53□□□□□ -0.88
SMAD3-215ENST00000560424 NAT6Q93015 286 aa9.53□□□□□ -0.88
SMAD3-215ENST00000560424 CRACR2AQ9BSW2 395 aa9.53□□□□□ -0.88
SMAD3-215ENST00000560424 INTS2Q9H0H0 1204 aaKnown RBP9.53□□□□□ -0.88
SMAD3-215ENST00000560424 ADNPQ9H2P0 1102 aa9.53□□□□□ -0.88
SMAD3-215ENST00000560424 FZD3Q9NPG1 666 aa9.53□□□□□ -0.88
SMAD3-215ENST00000560424 DYRK4Q9NR20 520 aa9.53□□□□□ -0.88
SMAD3-215ENST00000560424 RAB20Q9NX57 234 aa9.53□□□□□ -0.88
SMAD3-215ENST00000560424 INTS6Q9UL03 887 aaKnown RBP9.53□□□□□ -0.88
SMAD3-215ENST00000560424 PCDHGA7Q9Y5G6 932 aa9.53□□□□□ -0.88
SMAD3-215ENST00000560424 PCDHGA4Q9Y5G9 962 aa9.53□□□□□ -0.88
SMAD3-215ENST00000560424 BOD1L1Q8NFC6 3051 aa9.53□□□□□ -0.88
SMAD3-215ENST00000560424 NBPF19A0A087WUL8 3843 aa9.52□□□□□ -0.89
SMAD3-215ENST00000560424 LY6G6EA0A0G2JKS1 128 aa9.52□□□□□ -0.89
SMAD3-215ENST00000560424 A0A1W2PQU0 124 aa9.52□□□□□ -0.89
SMAD3-215ENST00000560424 EIF3CLB5ME19 914 aaKnown RBP9.52□□□□□ -0.89
SMAD3-215ENST00000560424 ZSCAN12O43309 604 aa9.52□□□□□ -0.89
SMAD3-215ENST00000560424 AQP9O43315 295 aa9.52□□□□□ -0.89
SMAD3-215ENST00000560424 BNIP3LO60238 219 aa9.52□□□□□ -0.89
SMAD3-215ENST00000560424 GFPT2O94808 682 aa9.52□□□□□ -0.89
SMAD3-215ENST00000560424 PCDH8O95206 1070 aa9.52□□□□□ -0.89
SMAD3-215ENST00000560424 LUC7L3O95232 432 aaKnown RBP9.52□□□□□ -0.89
SMAD3-215ENST00000560424 LCA5LO95447 670 aa9.52□□□□□ -0.89
SMAD3-215ENST00000560424 HLA-DRAP01903 254 aa9.52□□□□□ -0.89
SMAD3-215ENST00000560424 SERPING1P05155 500 aa9.52□□□□□ -0.89
SMAD3-215ENST00000560424 CCDC172P0C7W6 258 aa9.52□□□□□ -0.89
SMAD3-215ENST00000560424 GIMD1P0DJR0 217 aa9.52□□□□□ -0.89
SMAD3-215ENST00000560424 SLC6A4P31645 630 aa9.52□□□□□ -0.89
SMAD3-215ENST00000560424 STK19P49842 368 aaPredicted RBP9.52□□□□□ -0.89
SMAD3-215ENST00000560424 TBX4P57082 545 aa9.52□□□□□ -0.89
SMAD3-215ENST00000560424 POLR2FP61218 127 aaKnown RBP9.52□□□□□ -0.89
SMAD3-215ENST00000560424 RPS24P62847 133 aaKnown RBP9.52□□□□□ -0.89
SMAD3-215ENST00000560424 FOXK1P85037 733 aa9.52□□□□□ -0.89
SMAD3-215ENST00000560424 GCNT1Q02742 428 aa9.52□□□□□ -0.89
SMAD3-215ENST00000560424 SULT2A1Q06520 285 aa9.52□□□□□ -0.89
SMAD3-215ENST00000560424 ADIGQ0VDE8 80 aa9.52□□□□□ -0.89
SMAD3-215ENST00000560424 CNTN1Q12860 1018 aa9.52□□□□□ -0.89
SMAD3-215ENST00000560424 ASTE1Q2TB18 679 aaPredicted RBP9.52□□□□□ -0.89
SMAD3-215ENST00000560424 AGBL4Q5VU57 503 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms