RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 BUD23O43709 281 aaKnown RBP13.62□□□□□ -0.23
TRAF3-208ENST00000560371 OR10H2O60403 315 aa13.62□□□□□ -0.23
TRAF3-208ENST00000560371 SLC25A14O95258 325 aaPredicted RBP13.62□□□□□ -0.23
TRAF3-208ENST00000560371 LPOP22079 712 aaPredicted RBP13.62□□□□□ -0.23
TRAF3-208ENST00000560371 VHLP40337 213 aa13.62□□□□□ -0.23
TRAF3-208ENST00000560371 C21orf59P57076 290 aa13.62□□□□□ -0.23
TRAF3-208ENST00000560371 SYT12Q8IV01 421 aa13.62□□□□□ -0.23
TRAF3-208ENST00000560371 CFAP52Q8N1V2 620 aa13.62□□□□□ -0.23
TRAF3-208ENST00000560371 SEPHS2Q99611 448 aa13.62□□□□□ -0.23
TRAF3-208ENST00000560371 BDH2Q9BUT1 245 aa13.62□□□□□ -0.23
TRAF3-208ENST00000560371 POMKQ9H5K3 350 aa13.62□□□□□ -0.23
TRAF3-208ENST00000560371 BPIFA1Q9NP55 256 aa13.62□□□□□ -0.23
TRAF3-208ENST00000560371 KIAA1522Q9P206 1035 aaPredicted RBP13.62□□□□□ -0.23
TRAF3-208ENST00000560371 TBC1D14Q9P2M4 693 aa13.62□□□□□ -0.23
TRAF3-208ENST00000560371 KLQ9UEF7 1012 aa13.62□□□□□ -0.23
TRAF3-208ENST00000560371 RWDD3Q9Y3V2 267 aa13.62□□□□□ -0.23
TRAF3-208ENST00000560371 ACSL4O60488 711 aa13.61□□□□□ -0.23
TRAF3-208ENST00000560371 MRPS5P82675 430 aaKnown RBP13.61□□□□□ -0.23
TRAF3-208ENST00000560371 CEP78Q5JTW2 689 aa13.61□□□□□ -0.23
TRAF3-208ENST00000560371 ICE2Q659A1 982 aa13.61□□□□□ -0.23
TRAF3-208ENST00000560371 ILDR1Q86SU0 546 aaPredicted RBP13.61□□□□□ -0.23
TRAF3-208ENST00000560371 COMMD2Q86X83 199 aa13.61□□□□□ -0.23
TRAF3-208ENST00000560371 INPP4AQ96PE3 977 aaPredicted RBP13.61□□□□□ -0.23
TRAF3-208ENST00000560371 GPR20Q99678 358 aa13.61□□□□□ -0.23
TRAF3-208ENST00000560371 PRDM12Q9H4Q4 367 aa13.61□□□□□ -0.23
TRAF3-208ENST00000560371 URADA6NGE7 173 aa13.61□□□□□ -0.23
TRAF3-208ENST00000560371 UMPSP11172 480 aa13.61□□□□□ -0.23
TRAF3-208ENST00000560371 CRADDP78560 199 aa13.61□□□□□ -0.23
TRAF3-208ENST00000560371 EID3Q8N140 333 aa13.61□□□□□ -0.23
TRAF3-208ENST00000560371 GFM2Q969S9 779 aaKnown RBP13.61□□□□□ -0.23
TRAF3-208ENST00000560371 TLR10Q9BXR5 811 aa13.61□□□□□ -0.23
TRAF3-208ENST00000560371 L2HGDHQ9H9P8 463 aa13.61□□□□□ -0.23
TRAF3-208ENST00000560371 TAGLN3Q9UI15 199 aa13.61□□□□□ -0.23
TRAF3-208ENST00000560371 DEFB107AQ8IZN7 70 aa13.61□□□□□ -0.23
TRAF3-208ENST00000560371 ZCCHC9Q8N567 271 aaKnown RBP13.61□□□□□ -0.23
TRAF3-208ENST00000560371 NKAPQ8N5F7 415 aaKnown RBP13.61□□□□□ -0.23
TRAF3-208ENST00000560371 APOPT1Q96IL0 206 aa13.61□□□□□ -0.23
TRAF3-208ENST00000560371 EXO5Q9H790 373 aa13.61□□□□□ -0.23
TRAF3-208ENST00000560371 BTBD7Q9P203 1132 aa13.61□□□□□ -0.23
TRAF3-208ENST00000560371 PHGDHO43175 533 aaKnown RBP13.61□□□□□ -0.23
TRAF3-208ENST00000560371 CNOT3O75175 753 aaKnown RBP13.61□□□□□ -0.23
TRAF3-208ENST00000560371 OR6A2O95222 327 aa13.61□□□□□ -0.23
TRAF3-208ENST00000560371 RPA3P35244 121 aaPredicted RBP13.61□□□□□ -0.23
TRAF3-208ENST00000560371 SOX6P35712 828 aa13.61□□□□□ -0.23
TRAF3-208ENST00000560371 DSG1Q02413 1049 aa13.61□□□□□ -0.23
TRAF3-208ENST00000560371 EEF1DP3Q658K8 133 aa13.61□□□□□ -0.23
TRAF3-208ENST00000560371 FOXR1Q6PIV2 292 aa13.61□□□□□ -0.23
TRAF3-208ENST00000560371 NPNTQ6UXI9 565 aa13.61□□□□□ -0.23
TRAF3-208ENST00000560371 FAM35AQ86V20 835 aa13.61□□□□□ -0.23
TRAF3-208ENST00000560371 KRT73Q86Y46 540 aa13.61□□□□□ -0.23
TRAF3-208ENST00000560371 PROX1Q92786 737 aa13.61□□□□□ -0.23
TRAF3-208ENST00000560371 MYOCQ99972 504 aa13.61□□□□□ -0.23
TRAF3-208ENST00000560371 ADI1Q9BV57 179 aa13.61□□□□□ -0.23
TRAF3-208ENST00000560371 DEC1Q9P2X7 70 aa13.61□□□□□ -0.23
TRAF3-208ENST00000560371 EPN2O95208 641 aa13.61□□□□□ -0.23
TRAF3-208ENST00000560371 PRKAG1P54619 331 aa13.61□□□□□ -0.23
TRAF3-208ENST00000560371 SRLQ86TD4 932 aa13.61□□□□□ -0.23
TRAF3-208ENST00000560371 GATAD2AQ86YP4 633 aa13.61□□□□□ -0.23
TRAF3-208ENST00000560371 NLGN2Q8NFZ4 835 aa13.61□□□□□ -0.23
TRAF3-208ENST00000560371 SMG7Q92540 1137 aaKnown RBP13.61□□□□□ -0.23
TRAF3-208ENST00000560371 ZNF670Q9BS34 389 aa13.61□□□□□ -0.23
TRAF3-208ENST00000560371 RIPK3Q9Y572 518 aa13.61□□□□□ -0.23
TRAF3-208ENST00000560371 ADGRB2O60241 1585 aa13.61□□□□□ -0.23
TRAF3-208ENST00000560371 TK2O00142 265 aa13.61□□□□□ -0.23
TRAF3-208ENST00000560371 SEPT4O43236 478 aa13.61□□□□□ -0.23
TRAF3-208ENST00000560371 MAGEC1O60732 1142 aa13.61□□□□□ -0.23
TRAF3-208ENST00000560371 ERCC2P18074 760 aa13.61□□□□□ -0.23
TRAF3-208ENST00000560371 MAXP61244 160 aa13.61□□□□□ -0.23
TRAF3-208ENST00000560371 BRMS1LQ5PSV4 323 aa13.61□□□□□ -0.23
TRAF3-208ENST00000560371 FBXO22Q8NEZ5 403 aa13.61□□□□□ -0.23
TRAF3-208ENST00000560371 ATP6V1HQ9UI12 483 aa13.61□□□□□ -0.23
TRAF3-208ENST00000560371 H3BN98 237 aa13.6□□□□□ -0.23
TRAF3-208ENST00000560371 SLC35G4P0C7Q5 338 aa13.6□□□□□ -0.23
TRAF3-208ENST00000560371 HSMCR30P0CW71 290 aa13.6□□□□□ -0.23
TRAF3-208ENST00000560371 BIKQ13323 160 aa13.6□□□□□ -0.23
TRAF3-208ENST00000560371 TMEM154Q6P9G4 183 aa13.6□□□□□ -0.23
TRAF3-208ENST00000560371 CNSTQ6PJW8 725 aa13.6□□□□□ -0.23
TRAF3-208ENST00000560371 MACC1Q6ZN28 852 aa13.6□□□□□ -0.23
TRAF3-208ENST00000560371 CPA6Q8N4T0 437 aa13.6□□□□□ -0.23
TRAF3-208ENST00000560371 MSL3Q8N5Y2 521 aaKnown RBP13.6□□□□□ -0.23
TRAF3-208ENST00000560371 CAVIN3Q969G5 261 aa13.6□□□□□ -0.23
TRAF3-208ENST00000560371 ZBTB10Q96DT7 871 aa13.6□□□□□ -0.23
TRAF3-208ENST00000560371 MAML3Q96JK9 1138 aa13.6□□□□□ -0.23
TRAF3-208ENST00000560371 LZTS1Q9Y250 596 aa13.6□□□□□ -0.23
TRAF3-208ENST00000560371 ARID1BQ8NFD5 2236 aaPredicted RBP13.6□□□□□ -0.23
TRAF3-208ENST00000560371 LRRC14BA6NHZ5 514 aa13.6□□□□□ -0.23
TRAF3-208ENST00000560371 PIRTP0C851 137 aa13.6□□□□□ -0.23
TRAF3-208ENST00000560371 SPATA31C1P0DKV0 1188 aa13.6□□□□□ -0.23
TRAF3-208ENST00000560371 PAICSP22234 425 aaKnown RBP13.6□□□□□ -0.23
TRAF3-208ENST00000560371 IFNGR2P38484 337 aa13.6□□□□□ -0.23
TRAF3-208ENST00000560371 TAF10Q12962 218 aa13.6□□□□□ -0.23
TRAF3-208ENST00000560371 ZNHIT3Q15649 155 aaPredicted RBP13.6□□□□□ -0.23
TRAF3-208ENST00000560371 RAD21L1Q9H4I0 556 aa13.6□□□□□ -0.23
TRAF3-208ENST00000560371 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.6□□□□□ -0.23
TRAF3-208ENST00000560371 APODP05090 189 aa13.6□□□□□ -0.23
TRAF3-208ENST00000560371 NTSP30990 170 aa13.6□□□□□ -0.23
TRAF3-208ENST00000560371 COPZ1P61923 177 aa13.6□□□□□ -0.23
TRAF3-208ENST00000560371 FAM45BPQ6NSW5 357 aa13.6□□□□□ -0.23
TRAF3-208ENST00000560371 PAGE2Q7Z2X7 111 aa13.6□□□□□ -0.23
TRAF3-208ENST00000560371 TMC3Q7Z5M5 1100 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms