RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 LBRQ14739 615 aaKnown RBP12.26□□□□□ -0.45
RABGGTA-215ENST00000560207 ANO7Q6IWH7 933 aa12.26□□□□□ -0.45
RABGGTA-215ENST00000560207 CPNE8Q86YQ8 564 aa12.26□□□□□ -0.45
RABGGTA-215ENST00000560207 CCDC13Q8IYE1 715 aa12.26□□□□□ -0.45
RABGGTA-215ENST00000560207 MAML2Q8IZL2 1156 aaPredicted RBP12.26□□□□□ -0.45
RABGGTA-215ENST00000560207 HMGB4Q8WW32 186 aa12.26□□□□□ -0.45
RABGGTA-215ENST00000560207 PPP1R2P1Q96PQ5 205 aa12.26□□□□□ -0.45
RABGGTA-215ENST00000560207 TUBGCP5Q96RT8 1024 aa12.26□□□□□ -0.45
RABGGTA-215ENST00000560207 NAP1L3Q99457 506 aaPredicted RBP12.26□□□□□ -0.45
RABGGTA-215ENST00000560207 HEPHQ9BQS7 1158 aa12.26□□□□□ -0.45
RABGGTA-215ENST00000560207 CINPQ9BW66 212 aaPredicted RBP12.26□□□□□ -0.45
RABGGTA-215ENST00000560207 KDM4CQ9H3R0 1056 aa12.26□□□□□ -0.45
RABGGTA-215ENST00000560207 ITM2CQ9NQX7 267 aa12.26□□□□□ -0.45
RABGGTA-215ENST00000560207 DYRK4Q9NR20 520 aa12.26□□□□□ -0.45
RABGGTA-215ENST00000560207 ETNK2Q9NVF9 386 aa12.26□□□□□ -0.45
RABGGTA-215ENST00000560207 KLHL11Q9NVR0 708 aa12.26□□□□□ -0.45
RABGGTA-215ENST00000560207 HEY1Q9Y5J3 304 aa12.26□□□□□ -0.45
RABGGTA-215ENST00000560207 CES2O00748 559 aa12.25□□□□□ -0.45
RABGGTA-215ENST00000560207 DDX3YO15523 660 aaKnown RBP12.25□□□□□ -0.45
RABGGTA-215ENST00000560207 MFSD11O43934 449 aa12.25□□□□□ -0.45
RABGGTA-215ENST00000560207 STK10O94804 968 aaKnown RBP12.25□□□□□ -0.45
RABGGTA-215ENST00000560207 MT-CO1P00395 513 aa12.25□□□□□ -0.45
RABGGTA-215ENST00000560207 HLA-EP13747 358 aa12.25□□□□□ -0.45
RABGGTA-215ENST00000560207 NDUFV2P19404 249 aa12.25□□□□□ -0.45
RABGGTA-215ENST00000560207 CA4P22748 312 aa12.25□□□□□ -0.45
RABGGTA-215ENST00000560207 CHRNA3P32297 505 aa12.25□□□□□ -0.45
RABGGTA-215ENST00000560207 COPAP53621 1224 aa12.25□□□□□ -0.45
RABGGTA-215ENST00000560207 POLR2LP62875 67 aaKnown RBP12.25□□□□□ -0.45
RABGGTA-215ENST00000560207 CST6Q15828 149 aa12.25□□□□□ -0.45
RABGGTA-215ENST00000560207 LINGO4Q6UY18 593 aa12.25□□□□□ -0.45
RABGGTA-215ENST00000560207 TEX26Q8N6G2 289 aa12.25□□□□□ -0.45
RABGGTA-215ENST00000560207 CCNYQ8ND76 341 aa12.25□□□□□ -0.45
RABGGTA-215ENST00000560207 MDGA1Q8NFP4 955 aa12.25□□□□□ -0.45
RABGGTA-215ENST00000560207 OR2A12Q8NGT7 310 aa12.25□□□□□ -0.45
RABGGTA-215ENST00000560207 TFB1MQ8WVM0 346 aaKnown RBP12.25□□□□□ -0.45
RABGGTA-215ENST00000560207 GAB3Q8WWW8 586 aa12.25□□□□□ -0.45
RABGGTA-215ENST00000560207 MAML1Q92585 1016 aa12.25□□□□□ -0.45
RABGGTA-215ENST00000560207 ALG3Q92685 438 aa12.25□□□□□ -0.45
RABGGTA-215ENST00000560207 RAB7BQ96AH8 199 aa12.25□□□□□ -0.45
RABGGTA-215ENST00000560207 PBKQ96KB5 322 aa12.25□□□□□ -0.45
RABGGTA-215ENST00000560207 ZNF641Q96N77 438 aaPredicted RBP12.25□□□□□ -0.45
RABGGTA-215ENST00000560207 OLFM3Q96PB7 478 aa12.25□□□□□ -0.45
RABGGTA-215ENST00000560207 HHIPQ96QV1 700 aa12.25□□□□□ -0.45
RABGGTA-215ENST00000560207 SGK2Q9HBY8 427 aa12.25□□□□□ -0.45
RABGGTA-215ENST00000560207 HECAQ9UBI9 543 aaPredicted RBP12.25□□□□□ -0.45
RABGGTA-215ENST00000560207 IL36AQ9UHA7 158 aa12.25□□□□□ -0.45
RABGGTA-215ENST00000560207 PPM1HQ9ULR3 514 aa12.25□□□□□ -0.45
RABGGTA-215ENST00000560207 THADAQ6YHU6 1953 aa12.25□□□□□ -0.45
RABGGTA-215ENST00000560207 A0A0U1RQJ8 604 aa12.24□□□□□ -0.45
RABGGTA-215ENST00000560207 J3KR12 359 aa12.24□□□□□ -0.45
RABGGTA-215ENST00000560207 SMAD6O43541 496 aaKnown RBP12.24□□□□□ -0.45
RABGGTA-215ENST00000560207 LILRB5O75023 590 aa12.24□□□□□ -0.45
RABGGTA-215ENST00000560207 RPP40O75818 363 aaKnown RBP12.24□□□□□ -0.45
RABGGTA-215ENST00000560207 RHOBTB1O94844 696 aa12.24□□□□□ -0.45
RABGGTA-215ENST00000560207 CD160O95971 181 aa12.24□□□□□ -0.45
RABGGTA-215ENST00000560207 IL1BP01584 269 aa12.24□□□□□ -0.45
RABGGTA-215ENST00000560207 PYGMP11217 842 aa12.24□□□□□ -0.45
RABGGTA-215ENST00000560207 KRT10P13645 584 aa12.24□□□□□ -0.45
RABGGTA-215ENST00000560207 CCNB1P14635 433 aa12.24□□□□□ -0.45
RABGGTA-215ENST00000560207 PRLRP16471 622 aa12.24□□□□□ -0.45
RABGGTA-215ENST00000560207 COL9A1P20849 921 aa12.24□□□□□ -0.45
RABGGTA-215ENST00000560207 GLDCP23378 1020 aa12.24□□□□□ -0.45
RABGGTA-215ENST00000560207 SERPINA4P29622 427 aa12.24□□□□□ -0.45
RABGGTA-215ENST00000560207 SLC8A1P32418 973 aa12.24□□□□□ -0.45
RABGGTA-215ENST00000560207 NUDT1P36639 197 aa12.24□□□□□ -0.45
RABGGTA-215ENST00000560207 MMP13P45452 471 aa12.24□□□□□ -0.45
RABGGTA-215ENST00000560207 MARCKSL1P49006 195 aa12.24□□□□□ -0.45
RABGGTA-215ENST00000560207 DNA2P51530 1060 aa12.24□□□□□ -0.45
RABGGTA-215ENST00000560207 CCNHP51946 323 aaPredicted RBP12.24□□□□□ -0.45
RABGGTA-215ENST00000560207 RPS14P62263 151 aaKnown RBP12.24□□□□□ -0.45
RABGGTA-215ENST00000560207 IFI35P80217 286 aaPredicted RBP12.24□□□□□ -0.45
RABGGTA-215ENST00000560207 GBE1Q04446 702 aa12.24□□□□□ -0.45
RABGGTA-215ENST00000560207 MYLK3Q32MK0 819 aa12.24□□□□□ -0.45
RABGGTA-215ENST00000560207 ZNF569Q5MCW4 686 aa12.24□□□□□ -0.45
RABGGTA-215ENST00000560207 KAZNQ674X7 775 aa12.24□□□□□ -0.45
RABGGTA-215ENST00000560207 KIAA1211LQ6NV74 962 aa12.24□□□□□ -0.45
RABGGTA-215ENST00000560207 KIAA1324Q6UXG2 1013 aaKnown RBP12.24□□□□□ -0.45
RABGGTA-215ENST00000560207 Q6ZVU0 165 aa12.24□□□□□ -0.45
RABGGTA-215ENST00000560207 CDKL3Q8IVW4 592 aaPredicted RBP12.24□□□□□ -0.45
RABGGTA-215ENST00000560207 LOXL4Q96JB6 756 aa12.24□□□□□ -0.45
RABGGTA-215ENST00000560207 FAM129BQ96TA1 746 aa12.24□□□□□ -0.45
RABGGTA-215ENST00000560207 OMDQ99983 421 aa12.24□□□□□ -0.45
RABGGTA-215ENST00000560207 POLR1EQ9GZS1 481 aaKnown RBP12.24□□□□□ -0.45
RABGGTA-215ENST00000560207 MKRN2Q9H000 416 aaKnown RBP12.24□□□□□ -0.45
RABGGTA-215ENST00000560207 PABPC3Q9H361 631 aaKnown RBP12.24□□□□□ -0.45
RABGGTA-215ENST00000560207 ATP13A3Q9H7F0 1226 aa12.24□□□□□ -0.45
RABGGTA-215ENST00000560207 USP36Q9P275 1121 aaKnown RBP12.24□□□□□ -0.45
RABGGTA-215ENST00000560207 DKK3Q9UBP4 350 aa12.24□□□□□ -0.45
RABGGTA-215ENST00000560207 TRHDEQ9UKU6 1024 aa12.24□□□□□ -0.45
RABGGTA-215ENST00000560207 RAB23Q9ULC3 237 aa12.24□□□□□ -0.45
RABGGTA-215ENST00000560207 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.24□□□□□ -0.45
RABGGTA-215ENST00000560207 CACNA1HO95180 2353 aa12.23□□□□□ -0.45
RABGGTA-215ENST00000560207 CFAP69A5D8W1 941 aa12.23□□□□□ -0.45
RABGGTA-215ENST00000560207 KCNK3O14649 394 aa12.23□□□□□ -0.45
RABGGTA-215ENST00000560207 MAP3K13O43283 966 aa12.23□□□□□ -0.45
RABGGTA-215ENST00000560207 NDUFS2O75306 463 aa12.23□□□□□ -0.45
RABGGTA-215ENST00000560207 ZNF821O75541 412 aaPredicted RBP12.23□□□□□ -0.45
RABGGTA-215ENST00000560207 TCP1P17987 556 aaKnown RBP12.23□□□□□ -0.45
RABGGTA-215ENST00000560207 P2RY2P41231 377 aa12.23□□□□□ -0.45
RABGGTA-215ENST00000560207 FNTBP49356 437 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms