RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 K7ERQ8 282 aa13.09□□□□□ -0.31
RABGGTA-213ENST00000560127 RNF225M0QZC1 329 aaPredicted RBP13.09□□□□□ -0.31
RABGGTA-213ENST00000560127 NVLO15381 856 aaKnown RBP13.09□□□□□ -0.31
RABGGTA-213ENST00000560127 STX10O60499 249 aa13.09□□□□□ -0.31
RABGGTA-213ENST00000560127 TRUB2O95900 331 aaKnown RBP13.09□□□□□ -0.31
RABGGTA-213ENST00000560127 PRNPP04156 253 aa13.09□□□□□ -0.31
RABGGTA-213ENST00000560127 PAEPP09466 180 aa13.09□□□□□ -0.31
RABGGTA-213ENST00000560127 BRD2P25440 801 aaKnown RBP13.09□□□□□ -0.31
RABGGTA-213ENST00000560127 RPL34P49207 117 aaKnown RBP13.09□□□□□ -0.31
RABGGTA-213ENST00000560127 ADKP55263 362 aaKnown RBP13.09□□□□□ -0.31
RABGGTA-213ENST00000560127 RPS21P63220 83 aaKnown RBP13.09□□□□□ -0.31
RABGGTA-213ENST00000560127 FOXK1P85037 733 aa13.09□□□□□ -0.31
RABGGTA-213ENST00000560127 SERINC3Q13530 473 aa13.09□□□□□ -0.31
RABGGTA-213ENST00000560127 IGFBP7Q16270 282 aa13.09□□□□□ -0.31
RABGGTA-213ENST00000560127 SKIDA1Q1XH10 827 aa13.09□□□□□ -0.31
RABGGTA-213ENST00000560127 C4orf17Q53FE4 359 aa13.09□□□□□ -0.31
RABGGTA-213ENST00000560127 PRRT3Q5FWE3 981 aa13.09□□□□□ -0.31
RABGGTA-213ENST00000560127 ARSIQ5FYB1 569 aa13.09□□□□□ -0.31
RABGGTA-213ENST00000560127 RABGAP1LQ5R372 815 aa13.09□□□□□ -0.31
RABGGTA-213ENST00000560127 KIAA1161Q6NSJ0 714 aa13.09□□□□□ -0.31
RABGGTA-213ENST00000560127 TMEM270Q6UE05 265 aa13.09□□□□□ -0.31
RABGGTA-213ENST00000560127 PTRH1Q86Y79 214 aaKnown RBP13.09□□□□□ -0.31
RABGGTA-213ENST00000560127 ATP6V0D2Q8N8Y2 350 aa13.09□□□□□ -0.31
RABGGTA-213ENST00000560127 ZNF564Q8TBZ8 553 aaPredicted RBP13.09□□□□□ -0.31
RABGGTA-213ENST00000560127 RNF34Q969K3 372 aa13.09□□□□□ -0.31
RABGGTA-213ENST00000560127 PPP1R13BQ96KQ4 1090 aa13.09□□□□□ -0.31
RABGGTA-213ENST00000560127 PPP1R9BQ96SB3 815 aa13.09□□□□□ -0.31
RABGGTA-213ENST00000560127 PSMB7Q99436 277 aa13.09□□□□□ -0.31
RABGGTA-213ENST00000560127 PISDQ9UG56 409 aa13.09□□□□□ -0.31
RABGGTA-213ENST00000560127 APOBEC3BQ9UH17 382 aaKnown RBP13.09□□□□□ -0.31
RABGGTA-213ENST00000560127 FARP1Q9Y4F1 1045 aaPredicted RBP13.09□□□□□ -0.31
RABGGTA-213ENST00000560127 D6RAR5 112 aa13.08□□□□□ -0.32
RABGGTA-213ENST00000560127 TMX2-CTNND1H3BSU7 103 aa13.08□□□□□ -0.32
RABGGTA-213ENST00000560127 SMAD6O43541 496 aaKnown RBP13.08□□□□□ -0.32
RABGGTA-213ENST00000560127 SNAP91O60641 907 aa13.08□□□□□ -0.32
RABGGTA-213ENST00000560127 RRM1P23921 792 aa13.08□□□□□ -0.32
RABGGTA-213ENST00000560127 ME1P48163 572 aa13.08□□□□□ -0.32
RABGGTA-213ENST00000560127 LRMPQ12912 555 aa13.08□□□□□ -0.32
RABGGTA-213ENST00000560127 MORC3Q14149 939 aa13.08□□□□□ -0.32
RABGGTA-213ENST00000560127 ATP11CQ8NB49 1132 aa13.08□□□□□ -0.32
RABGGTA-213ENST00000560127 GRIN3AQ8TCU5 1115 aa13.08□□□□□ -0.32
RABGGTA-213ENST00000560127 BTN2A2Q8WVV5 523 aa13.08□□□□□ -0.32
RABGGTA-213ENST00000560127 FEM1CQ96JP0 617 aa13.08□□□□□ -0.32
RABGGTA-213ENST00000560127 RPRD1AQ96P16 312 aaPredicted RBP13.08□□□□□ -0.32
RABGGTA-213ENST00000560127 LRRC61Q9BV99 259 aa13.08□□□□□ -0.32
RABGGTA-213ENST00000560127 STRADBQ9C0K7 418 aa13.08□□□□□ -0.32
RABGGTA-213ENST00000560127 CLPBQ9H078 707 aa13.08□□□□□ -0.32
RABGGTA-213ENST00000560127 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.08□□□□□ -0.32
RABGGTA-213ENST00000560127 SEPT10Q9P0V9 454 aa13.08□□□□□ -0.32
RABGGTA-213ENST00000560127 RCOR1Q9UKL0 485 aa13.08□□□□□ -0.32
RABGGTA-213ENST00000560127 FADS3Q9Y5Q0 445 aa13.08□□□□□ -0.32
RABGGTA-213ENST00000560127 MED13Q9UHV7 2174 aa13.08□□□□□ -0.32
RABGGTA-213ENST00000560127 HIVEP3Q5T1R4 2406 aa13.08□□□□□ -0.32
RABGGTA-213ENST00000560127 ANKRD36A6QL64 1941 aa13.07□□□□□ -0.32
RABGGTA-213ENST00000560127 PRAMEF33A0A0G2JMD5 474 aa13.07□□□□□ -0.32
RABGGTA-213ENST00000560127 A0A1W2PQM1 296 aa13.07□□□□□ -0.32
RABGGTA-213ENST00000560127 FPGTO14772 594 aa13.07□□□□□ -0.32
RABGGTA-213ENST00000560127 YY2O15391 372 aa13.07□□□□□ -0.32
RABGGTA-213ENST00000560127 SART1O43290 800 aaKnown RBP13.07□□□□□ -0.32
RABGGTA-213ENST00000560127 PRAMEF10O60809 474 aa13.07□□□□□ -0.32
RABGGTA-213ENST00000560127 LEFTY1O75610 366 aa13.07□□□□□ -0.32
RABGGTA-213ENST00000560127 RHOBTB3O94955 611 aa13.07□□□□□ -0.32
RABGGTA-213ENST00000560127 ANXA6P08133 673 aa13.07□□□□□ -0.32
RABGGTA-213ENST00000560127 PRR29P0C7W0 189 aa13.07□□□□□ -0.32
RABGGTA-213ENST00000560127 ADRB3P13945 408 aa13.07□□□□□ -0.32
RABGGTA-213ENST00000560127 ITIH1P19827 911 aa13.07□□□□□ -0.32
RABGGTA-213ENST00000560127 TBXAS1P24557 533 aaPredicted RBP13.07□□□□□ -0.32
RABGGTA-213ENST00000560127 CCKBRP32239 447 aa13.07□□□□□ -0.32
RABGGTA-213ENST00000560127 NEK3P51956 506 aa13.07□□□□□ -0.32
RABGGTA-213ENST00000560127 PFN3P60673 137 aa13.07□□□□□ -0.32
RABGGTA-213ENST00000560127 CCL7P80098 99 aa13.07□□□□□ -0.32
RABGGTA-213ENST00000560127 AUHQ13825 339 aaKnown RBP13.07□□□□□ -0.32
RABGGTA-213ENST00000560127 BECN1Q14457 450 aa13.07□□□□□ -0.32
RABGGTA-213ENST00000560127 STILQ15468 1287 aa13.07□□□□□ -0.32
RABGGTA-213ENST00000560127 ZFAND4Q86XD8 727 aa13.07□□□□□ -0.32
RABGGTA-213ENST00000560127 DTX1Q86Y01 620 aa13.07□□□□□ -0.32
RABGGTA-213ENST00000560127 PHACTR4Q8IZ21 702 aa13.07□□□□□ -0.32
RABGGTA-213ENST00000560127 SDR16C5Q8N3Y7 309 aa13.07□□□□□ -0.32
RABGGTA-213ENST00000560127 GUF1Q8N442 669 aaKnown RBP13.07□□□□□ -0.32
RABGGTA-213ENST00000560127 ZSCAN1Q8NBB4 408 aa13.07□□□□□ -0.32
RABGGTA-213ENST00000560127 CCDC74AQ96AQ1 378 aa13.07□□□□□ -0.32
RABGGTA-213ENST00000560127 CCDC114Q96M63 670 aa13.07□□□□□ -0.32
RABGGTA-213ENST00000560127 LENG8Q96PV6 779 aaPredicted RBP13.07□□□□□ -0.32
RABGGTA-213ENST00000560127 GFM1Q96RP9 751 aaKnown RBP13.07□□□□□ -0.32
RABGGTA-213ENST00000560127 C1QTNF2Q9BXJ5 285 aa13.07□□□□□ -0.32
RABGGTA-213ENST00000560127 ADNPQ9H2P0 1102 aa13.07□□□□□ -0.32
RABGGTA-213ENST00000560127 ST7Q9NRC1 585 aa13.07□□□□□ -0.32
RABGGTA-213ENST00000560127 IL36AQ9UHA7 158 aa13.07□□□□□ -0.32
RABGGTA-213ENST00000560127 SLC12A6Q9UHW9 1150 aa13.07□□□□□ -0.32
RABGGTA-213ENST00000560127 VPS51Q9UID3 782 aa13.07□□□□□ -0.32
RABGGTA-213ENST00000560127 VANGL2Q9ULK5 521 aa13.07□□□□□ -0.32
RABGGTA-213ENST00000560127 TBC1D30Q9Y2I9 924 aa13.07□□□□□ -0.32
RABGGTA-213ENST00000560127 LOXL2Q9Y4K0 774 aa13.07□□□□□ -0.32
RABGGTA-213ENST00000560127 PCDHB4Q9Y5E5 795 aa13.07□□□□□ -0.32
RABGGTA-213ENST00000560127 WASF2Q9Y6W5 498 aa13.07□□□□□ -0.32
RABGGTA-213ENST00000560127 ESPL1Q14674 2120 aa13.07□□□□□ -0.32
RABGGTA-213ENST00000560127 IGLON5A6NGN9 336 aa13.06□□□□□ -0.32
RABGGTA-213ENST00000560127 ZNF821O75541 412 aaPredicted RBP13.06□□□□□ -0.32
RABGGTA-213ENST00000560127 MYL1P05976 194 aa13.06□□□□□ -0.32
RABGGTA-213ENST00000560127 CELA2BP08218 269 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms