RNA–Protein interactions for RNA: ENST00000559281.5

TPM1-218, Transcript of tropomyosin 1, humanhuman

TSL 5 BASIC

Gene TPM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-218ENST00000559281 ARHGEF2Q92974 986 aaKnown RBP18.1■□□□□ 0.49
TPM1-218ENST00000559281 LRIG1Q96JA1 1093 aa18.1■□□□□ 0.49
TPM1-218ENST00000559281 FEM1CQ96JP0 617 aa18.1■□□□□ 0.49
TPM1-218ENST00000559281 MCEEQ96PE7 176 aa18.1■□□□□ 0.49
TPM1-218ENST00000559281 CNPY3Q9BT09 278 aa18.1■□□□□ 0.49
TPM1-218ENST00000559281 DONSONQ9NYP3 566 aa18.1■□□□□ 0.49
TPM1-218ENST00000559281 FCF1Q9Y324 198 aaKnown RBP18.1■□□□□ 0.49
TPM1-218ENST00000559281 ZSCAN5CA6NGD5 496 aaPredicted RBP18.09■□□□□ 0.49
TPM1-218ENST00000559281 TEX33O43247 280 aa18.09■□□□□ 0.49
TPM1-218ENST00000559281 ZNF821O75541 412 aaPredicted RBP18.09■□□□□ 0.49
TPM1-218ENST00000559281 DKK1O94907 266 aa18.09■□□□□ 0.49
TPM1-218ENST00000559281 LDOC1O95751 146 aaPredicted RBP18.09■□□□□ 0.49
TPM1-218ENST00000559281 CDK4P11802 303 aa18.09■□□□□ 0.49
TPM1-218ENST00000559281 ITGB7P26010 798 aa18.09■□□□□ 0.49
TPM1-218ENST00000559281 EPHB2P29323 1055 aa18.09■□□□□ 0.49
TPM1-218ENST00000559281 ZNF165P49910 485 aa18.09■□□□□ 0.49
TPM1-218ENST00000559281 CCNHP51946 323 aaPredicted RBP18.09■□□□□ 0.49
TPM1-218ENST00000559281 SNRPD1P62314 119 aaKnown RBP18.09■□□□□ 0.49
TPM1-218ENST00000559281 TMPRSS7Q7RTY8 843 aa18.09■□□□□ 0.49
TPM1-218ENST00000559281 ZNF354CQ86Y25 554 aa18.09■□□□□ 0.49
TPM1-218ENST00000559281 RYBPQ8N488 228 aaPredicted RBP18.09■□□□□ 0.49
TPM1-218ENST00000559281 FAM174AQ8TBP5 190 aa18.09■□□□□ 0.49
TPM1-218ENST00000559281 EPAS1Q99814 870 aa18.09■□□□□ 0.49
TPM1-218ENST00000559281 CATSPERBQ9H7T0 1116 aa18.09■□□□□ 0.49
TPM1-218ENST00000559281 NDFIP2Q9NV92 336 aa18.09■□□□□ 0.49
TPM1-218ENST00000559281 TOR4AQ9NXH8 423 aa18.09■□□□□ 0.49
TPM1-218ENST00000559281 WASF2Q9Y6W5 498 aa18.09■□□□□ 0.49
TPM1-218ENST00000559281 TCRBV5S1A1TA0A578 114 aa18.08■□□□□ 0.48
TPM1-218ENST00000559281 CCP110O43303 1012 aa18.08■□□□□ 0.48
TPM1-218ENST00000559281 KDELR3O43731 214 aa18.08■□□□□ 0.48
TPM1-218ENST00000559281 POP4O95707 220 aaKnown RBP18.08■□□□□ 0.48
TPM1-218ENST00000559281 HNRNPA2B1P22626 353 aaKnown RBP18.08■□□□□ 0.48
TPM1-218ENST00000559281 EPHA8P29322 1005 aaPredicted RBP18.08■□□□□ 0.48
TPM1-218ENST00000559281 YBEYP58557 167 aaPredicted RBP18.08■□□□□ 0.48
TPM1-218ENST00000559281 RPS21P63220 83 aaKnown RBP18.08■□□□□ 0.48
TPM1-218ENST00000559281 SHBQ15464 509 aa18.08■□□□□ 0.48
TPM1-218ENST00000559281 ZNF284Q2VY69 593 aa18.08■□□□□ 0.48
TPM1-218ENST00000559281 CAVIN1Q6NZI2 390 aaKnown RBP18.08■□□□□ 0.48
TPM1-218ENST00000559281 ZSCAN30Q86W11 494 aa18.08■□□□□ 0.48
TPM1-218ENST00000559281 CASKIN2Q8WXE0 1202 aa18.08■□□□□ 0.48
TPM1-218ENST00000559281 TM6SF2Q9BZW4 377 aa18.08■□□□□ 0.48
TPM1-218ENST00000559281 PARVAQ9NVD7 372 aa18.08■□□□□ 0.48
TPM1-218ENST00000559281 A0A1W2PQC6 194 aa18.07■□□□□ 0.48
TPM1-218ENST00000559281 BUB1O43683 1085 aa18.07■□□□□ 0.48
TPM1-218ENST00000559281 CD160O95971 181 aa18.07■□□□□ 0.48
TPM1-218ENST00000559281 GSRP00390 522 aa18.07■□□□□ 0.48
TPM1-218ENST00000559281 ADRB3P13945 408 aa18.07■□□□□ 0.48
TPM1-218ENST00000559281 RPL7AP62424 266 aaKnown RBP18.07■□□□□ 0.48
TPM1-218ENST00000559281 RAD51Q06609 339 aa18.07■□□□□ 0.48
TPM1-218ENST00000559281 ASIC2Q16515 512 aa18.07■□□□□ 0.48
TPM1-218ENST00000559281 CCDC157Q569K6 752 aa18.07■□□□□ 0.48
TPM1-218ENST00000559281 PPP1R15BQ5SWA1 713 aa18.07■□□□□ 0.48
TPM1-218ENST00000559281 KIAA1161Q6NSJ0 714 aa18.07■□□□□ 0.48
TPM1-218ENST00000559281 SPATS2Q86XZ4 545 aaKnown RBP18.07■□□□□ 0.48
TPM1-218ENST00000559281 EID2Q8N6I1 236 aa18.07■□□□□ 0.48
TPM1-218ENST00000559281 RTL3Q8N8U3 475 aaKnown RBP18.07■□□□□ 0.48
TPM1-218ENST00000559281 TMEM145Q8NBT3 493 aa18.07■□□□□ 0.48
TPM1-218ENST00000559281 OR2AP1Q8NGE2 309 aa18.07■□□□□ 0.48
TPM1-218ENST00000559281 KLK6Q92876 244 aa18.07■□□□□ 0.48
TPM1-218ENST00000559281 RAB7BQ96AH8 199 aa18.07■□□□□ 0.48
TPM1-218ENST00000559281 CNDP2Q96KP4 475 aaKnown RBP18.07■□□□□ 0.48
TPM1-218ENST00000559281 MAGEB5Q9BZ81 275 aa18.07■□□□□ 0.48
TPM1-218ENST00000559281 ZDHHC6Q9H6R6 413 aa18.07■□□□□ 0.48
TPM1-218ENST00000559281 FZD10Q9ULW2 581 aa18.07■□□□□ 0.48
TPM1-218ENST00000559281 PCDHGA1Q9Y5H4 931 aa18.07■□□□□ 0.48
TPM1-218ENST00000559281 KMT2BQ9UMN6 2715 aaPredicted RBP18.07■□□□□ 0.48
TPM1-218ENST00000559281 USP24Q9UPU5 2620 aa18.06■□□□□ 0.48
TPM1-218ENST00000559281 ENC1O14682 589 aa18.06■□□□□ 0.48
TPM1-218ENST00000559281 AP1G1O43747 822 aa18.06■□□□□ 0.48
TPM1-218ENST00000559281 CREB3O43889 395 aa18.06■□□□□ 0.48
TPM1-218ENST00000559281 C1SP09871 688 aa18.06■□□□□ 0.48
TPM1-218ENST00000559281 THEGLP0DJG4 465 aa18.06■□□□□ 0.48
TPM1-218ENST00000559281 PRLRP16471 622 aa18.06■□□□□ 0.48
TPM1-218ENST00000559281 HTR7P34969 479 aa18.06■□□□□ 0.48
TPM1-218ENST00000559281 BNIP3Q12983 259 aa18.06■□□□□ 0.48
TPM1-218ENST00000559281 MYLK3Q32MK0 819 aa18.06■□□□□ 0.48
TPM1-218ENST00000559281 INO80DQ53TQ3 878 aaPredicted RBP18.06■□□□□ 0.48
TPM1-218ENST00000559281 ZNF805Q5CZA5 627 aa18.06■□□□□ 0.48
TPM1-218ENST00000559281 SFMBT2Q5VUG0 894 aa18.06■□□□□ 0.48
TPM1-218ENST00000559281 TMC6Q7Z403 805 aa18.06■□□□□ 0.48
TPM1-218ENST00000559281 DCP2Q8IU60 420 aaKnown RBP18.06■□□□□ 0.48
TPM1-218ENST00000559281 PYROXD2Q8N2H3 581 aa18.06■□□□□ 0.48
TPM1-218ENST00000559281 BAP1Q92560 729 aa18.06■□□□□ 0.48
TPM1-218ENST00000559281 ARHGEF26Q96DR7 871 aa18.06■□□□□ 0.48
TPM1-218ENST00000559281 OSBPL1AQ9BXW6 950 aa18.06■□□□□ 0.48
TPM1-218ENST00000559281 SLC17A9Q9BYT1 436 aa18.06■□□□□ 0.48
TPM1-218ENST00000559281 EDEM3Q9BZQ6 932 aa18.06■□□□□ 0.48
TPM1-218ENST00000559281 KLHL11Q9NVR0 708 aa18.06■□□□□ 0.48
TPM1-218ENST00000559281 AIPL1Q9NZN9 384 aa18.06■□□□□ 0.48
TPM1-218ENST00000559281 NEU3Q9UQ49 428 aa18.06■□□□□ 0.48
TPM1-218ENST00000559281 FADS3Q9Y5Q0 445 aa18.06■□□□□ 0.48
TPM1-218ENST00000559281 ACTL7AQ9Y615 435 aa18.06■□□□□ 0.48
TPM1-218ENST00000559281 HS3ST3A1Q9Y663 406 aa18.06■□□□□ 0.48
TPM1-218ENST00000559281 LRRC53A6NM62 1247 aa18.05■□□□□ 0.48
TPM1-218ENST00000559281 WASH4PA8MWX3 477 aa18.05■□□□□ 0.48
TPM1-218ENST00000559281 TMCO5BA8MYB1 307 aa18.05■□□□□ 0.48
TPM1-218ENST00000559281 EIF3CLB5ME19 914 aaKnown RBP18.05■□□□□ 0.48
TPM1-218ENST00000559281 KRIT1O00522 736 aa18.05■□□□□ 0.48
TPM1-218ENST00000559281 NEMP1O14524 444 aa18.05■□□□□ 0.48
TPM1-218ENST00000559281 FGF10O15520 208 aaPredicted RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms