RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 SERTAD4-AS1Q5TG53 156 aa2.43□□□□□ -2.02
GABPB1-209ENST00000559100 FAM171A1Q5VUB5 890 aa2.43□□□□□ -2.02
GABPB1-209ENST00000559100 AADACL2Q6P093 401 aa2.43□□□□□ -2.02
GABPB1-209ENST00000559100 SHQ1Q6PI26 577 aaKnown RBP2.43□□□□□ -2.02
GABPB1-209ENST00000559100 SARM1Q6SZW1 724 aa2.43□□□□□ -2.02
GABPB1-209ENST00000559100 C17orf99Q6UX52 265 aa2.43□□□□□ -2.02
GABPB1-209ENST00000559100 TRIM72Q6ZMU5 477 aa2.43□□□□□ -2.02
GABPB1-209ENST00000559100 KRT74Q7RTS7 529 aa2.43□□□□□ -2.02
GABPB1-209ENST00000559100 PRSS45Q7RTY3 260 aa2.43□□□□□ -2.02
GABPB1-209ENST00000559100 KDELC2Q7Z4H8 507 aa2.43□□□□□ -2.02
GABPB1-209ENST00000559100 PRPF39Q86UA1 669 aaKnown RBP2.43□□□□□ -2.02
GABPB1-209ENST00000559100 CCDC25Q86WR0 208 aa2.43□□□□□ -2.02
GABPB1-209ENST00000559100 TDRPQ86YL5 185 aa2.43□□□□□ -2.02
GABPB1-209ENST00000559100 RASAL3Q86YV0 1011 aa2.43□□□□□ -2.02
GABPB1-209ENST00000559100 TICAM1Q8IUC6 712 aa2.43□□□□□ -2.02
GABPB1-209ENST00000559100 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.43□□□□□ -2.02
GABPB1-209ENST00000559100 UEVLDQ8IX04 471 aa2.43□□□□□ -2.02
GABPB1-209ENST00000559100 POMGNT2Q8NAT1 580 aa2.43□□□□□ -2.02
GABPB1-209ENST00000559100 SETD9Q8NE22 299 aa2.43□□□□□ -2.02
GABPB1-209ENST00000559100 RASSF8Q8NHQ8 419 aa2.43□□□□□ -2.02
GABPB1-209ENST00000559100 IP6K1Q92551 441 aa2.43□□□□□ -2.02
GABPB1-209ENST00000559100 PIGKQ92643 395 aa2.43□□□□□ -2.02
GABPB1-209ENST00000559100 KAT2BQ92831 832 aa2.43□□□□□ -2.02
GABPB1-209ENST00000559100 NELL1Q92832 810 aa2.43□□□□□ -2.02
GABPB1-209ENST00000559100 FUBP1Q96AE4 644 aaKnown RBP2.43□□□□□ -2.02
GABPB1-209ENST00000559100 ZC3HAV1LQ96H79 300 aaKnown RBP2.43□□□□□ -2.02
GABPB1-209ENST00000559100 ZNF845Q96IR2 970 aaPredicted RBP2.43□□□□□ -2.02
GABPB1-209ENST00000559100 C1orf74Q96LT6 269 aa2.43□□□□□ -2.02
GABPB1-209ENST00000559100 C8orf49Q96NF6 230 aa2.43□□□□□ -2.02
GABPB1-209ENST00000559100 WWC2-AS2Q96NR7 200 aa2.43□□□□□ -2.02
GABPB1-209ENST00000559100 CDK5RAP1Q96SZ6 601 aaKnown RBP2.43□□□□□ -2.02
GABPB1-209ENST00000559100 SSBP3Q9BWW4 388 aaPredicted RBP2.43□□□□□ -2.02
GABPB1-209ENST00000559100 TEX12Q9BXU0 123 aa2.43□□□□□ -2.02
GABPB1-209ENST00000559100 KLHL4Q9C0H6 718 aa2.43□□□□□ -2.02
GABPB1-209ENST00000559100 RABEP2Q9H5N1 569 aa2.43□□□□□ -2.02
GABPB1-209ENST00000559100 ZWILCHQ9H900 591 aa2.43□□□□□ -2.02
GABPB1-209ENST00000559100 GRPEL1Q9HAV7 217 aa2.43□□□□□ -2.02
GABPB1-209ENST00000559100 CD248Q9HCU0 757 aa2.43□□□□□ -2.02
GABPB1-209ENST00000559100 PDE7BQ9NP56 450 aa2.43□□□□□ -2.02
GABPB1-209ENST00000559100 SLC35C2Q9NQQ7 365 aa2.43□□□□□ -2.02
GABPB1-209ENST00000559100 SLC2A4RGQ9NR83 387 aa2.43□□□□□ -2.02
GABPB1-209ENST00000559100 SLC22A11Q9NSA0 550 aa2.43□□□□□ -2.02
GABPB1-209ENST00000559100 TMEM248Q9NWD8 314 aa2.43□□□□□ -2.02
GABPB1-209ENST00000559100 SH3BP4Q9P0V3 963 aa2.43□□□□□ -2.02
GABPB1-209ENST00000559100 DLGAP2Q9P1A6 1054 aa2.43□□□□□ -2.02
GABPB1-209ENST00000559100 CEP72Q9P209 647 aa2.43□□□□□ -2.02
GABPB1-209ENST00000559100 NLKQ9UBE8 527 aa2.43□□□□□ -2.02
GABPB1-209ENST00000559100 HSPB7Q9UBY9 170 aa2.43□□□□□ -2.02
GABPB1-209ENST00000559100 GIMAP2Q9UG22 337 aa2.43□□□□□ -2.02
GABPB1-209ENST00000559100 INTS6Q9UL03 887 aaKnown RBP2.43□□□□□ -2.02
GABPB1-209ENST00000559100 MAFFQ9ULX9 164 aa2.43□□□□□ -2.02
GABPB1-209ENST00000559100 PPIEQ9UNP9 301 aaKnown RBP2.43□□□□□ -2.02
GABPB1-209ENST00000559100 FZD1Q9UP38 647 aa2.43□□□□□ -2.02
GABPB1-209ENST00000559100 DTX4Q9Y2E6 619 aa2.43□□□□□ -2.02
GABPB1-209ENST00000559100 AAR2Q9Y312 384 aaKnown RBP2.43□□□□□ -2.02
GABPB1-209ENST00000559100 FAM96BQ9Y3D0 163 aa2.43□□□□□ -2.02
GABPB1-209ENST00000559100 CAPN7Q9Y6W3 813 aa2.43□□□□□ -2.02
GABPB1-209ENST00000559100 FAM169AQ9Y6X4 670 aa2.43□□□□□ -2.02
GABPB1-209ENST00000559100 EMSYQ7Z589 1322 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 FRMD3A2A2Y4 597 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 TARSL2A2RTX5 802 aaKnown RBP2.42□□□□□ -2.02
GABPB1-209ENST00000559100 DPPA5A6NC42 116 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 CXorf65A6NEN9 183 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 KCNJ18B7U540 433 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 UBE2Q2LH0YL09 131 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 SMIM22K7EJ46 135 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 CLGNO14967 610 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 HS6ST1O60243 411 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 USP12O75317 370 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 NDUFS3O75489 264 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 TJP3O95049 919 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 NKX2-2O95096 273 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 GGPS1O95749 300 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 SERPINC1P01008 464 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 ADRB2P07550 413 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 ADRB1P08588 477 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 HKR1P10072 659 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 EGR2P11161 476 aaPredicted RBP2.42□□□□□ -2.02
GABPB1-209ENST00000559100 VDRP11473 427 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 IL7RP16871 459 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 TMEM11P17152 192 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 TNFRSF1AP19438 455 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 SFPQP23246 707 aaKnown RBP eCLIP2.42□□□□□ -2.02
GABPB1-209ENST00000559100 ITPKBP27987 946 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 PCSK6P29122 969 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 EEF1DP29692 281 aaKnown RBP2.42□□□□□ -2.02
GABPB1-209ENST00000559100 CHRNA5P30532 468 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 SLC15A1P46059 708 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 AVPR1BP47901 424 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 NRIP1P48552 1158 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 BLKP51451 505 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 ARSFP54793 590 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 GALCP54803 685 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 F2RL1P55085 397 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 PSMC6P62333 389 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 CYP4A11Q02928 519 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 CSTF3Q12996 717 aaKnown RBP2.42□□□□□ -2.02
GABPB1-209ENST00000559100 LARS2Q15031 903 aaKnown RBP2.42□□□□□ -2.02
GABPB1-209ENST00000559100 COL28A1Q2UY09 1125 aa2.42□□□□□ -2.02
GABPB1-209ENST00000559100 CERKLQ49MI3 558 aaPredicted RBP2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms