RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 KRT81Q14533 505 aa15.84■□□□□ 0.13
LINC01220-201ENST00000558575 POLD3Q15054 466 aaPredicted RBP15.84■□□□□ 0.13
LINC01220-201ENST00000558575 PDK2Q15119 407 aa15.84■□□□□ 0.13
LINC01220-201ENST00000558575 FNDC3BQ53EP0 1204 aaKnown RBP15.84■□□□□ 0.13
LINC01220-201ENST00000558575 ZNF662Q6ZS27 426 aa15.84■□□□□ 0.13
LINC01220-201ENST00000558575 TRMT11Q7Z4G4 463 aaKnown RBP15.84■□□□□ 0.13
LINC01220-201ENST00000558575 DAAM2Q86T65 1068 aa15.84■□□□□ 0.13
LINC01220-201ENST00000558575 RHOT1Q8IXI2 618 aa15.84■□□□□ 0.13
LINC01220-201ENST00000558575 PQLC3Q8N755 202 aa15.84■□□□□ 0.13
LINC01220-201ENST00000558575 DCAF4L2Q8NA75 395 aa15.84■□□□□ 0.13
LINC01220-201ENST00000558575 KDM1BQ8NB78 822 aa15.84■□□□□ 0.13
LINC01220-201ENST00000558575 FRS2Q8WU20 508 aa15.84■□□□□ 0.13
LINC01220-201ENST00000558575 ANP32BQ92688 251 aaKnown RBP15.84■□□□□ 0.13
LINC01220-201ENST00000558575 KRT35Q92764 455 aa15.84■□□□□ 0.13
LINC01220-201ENST00000558575 FAF2Q96CS3 445 aa15.84■□□□□ 0.13
LINC01220-201ENST00000558575 HMCESQ96FZ2 354 aa15.84■□□□□ 0.13
LINC01220-201ENST00000558575 CELF6Q96J87 481 aaKnown RBP15.84■□□□□ 0.13
LINC01220-201ENST00000558575 CALR3Q96L12 384 aaKnown RBP15.84■□□□□ 0.13
LINC01220-201ENST00000558575 PPP1R9BQ96SB3 815 aa15.84■□□□□ 0.13
LINC01220-201ENST00000558575 FSCN3Q9NQT6 498 aa15.84■□□□□ 0.13
LINC01220-201ENST00000558575 TMEM74BQ9NUR3 256 aa15.84■□□□□ 0.13
LINC01220-201ENST00000558575 RCOR3Q9P2K3 495 aaPredicted RBP15.84■□□□□ 0.13
LINC01220-201ENST00000558575 MBD1Q9UIS9 605 aaPredicted RBP15.84■□□□□ 0.13
LINC01220-201ENST00000558575 RAXQ9Y2V3 346 aa15.84■□□□□ 0.13
LINC01220-201ENST00000558575 CBX4O00257 560 aa15.83■□□□□ 0.12
LINC01220-201ENST00000558575 SMAD6O43541 496 aaKnown RBP15.83■□□□□ 0.12
LINC01220-201ENST00000558575 KDELR3O43731 214 aa15.83■□□□□ 0.12
LINC01220-201ENST00000558575 PALMO75781 387 aa15.83■□□□□ 0.12
LINC01220-201ENST00000558575 CCDC175P0C221 793 aa15.83■□□□□ 0.12
LINC01220-201ENST00000558575 VAV1P15498 845 aa15.83■□□□□ 0.12
LINC01220-201ENST00000558575 NDST2P52849 883 aa15.83■□□□□ 0.12
LINC01220-201ENST00000558575 NAP1L1P55209 391 aaKnown RBP15.83■□□□□ 0.12
LINC01220-201ENST00000558575 YBEYP58557 167 aaPredicted RBP15.83■□□□□ 0.12
LINC01220-201ENST00000558575 ANKRD20A8PQ5CZ79 823 aa15.83■□□□□ 0.12
LINC01220-201ENST00000558575 SDE2Q6IQ49 451 aa15.83■□□□□ 0.12
LINC01220-201ENST00000558575 SERPINA13PQ6UXR4 307 aa15.83■□□□□ 0.12
LINC01220-201ENST00000558575 LINGO4Q6UY18 593 aa15.83■□□□□ 0.12
LINC01220-201ENST00000558575 NT5DC3Q86UY8 548 aa15.83■□□□□ 0.12
LINC01220-201ENST00000558575 RNF10Q8N5U6 811 aaKnown RBP15.83■□□□□ 0.12
LINC01220-201ENST00000558575 MDM1Q8TC05 714 aa15.83■□□□□ 0.12
LINC01220-201ENST00000558575 KIAA1524Q8TCG1 905 aa15.83■□□□□ 0.12
LINC01220-201ENST00000558575 RNF25Q96BH1 459 aaPredicted RBP15.83■□□□□ 0.12
LINC01220-201ENST00000558575 CRELD1Q96HD1 420 aa15.83■□□□□ 0.12
LINC01220-201ENST00000558575 C2orf49Q9BVC5 232 aaPredicted RBP15.83■□□□□ 0.12
LINC01220-201ENST00000558575 CCDC86Q9H6F5 360 aaKnown RBP15.83■□□□□ 0.12
LINC01220-201ENST00000558575 ATP13A1Q9HD20 1204 aa15.83■□□□□ 0.12
LINC01220-201ENST00000558575 PRSS16Q9NQE7 514 aa15.83■□□□□ 0.12
LINC01220-201ENST00000558575 HS3ST2Q9Y278 367 aa15.83■□□□□ 0.12
LINC01220-201ENST00000558575 PPP2R2CQ9Y2T4 447 aa15.83■□□□□ 0.12
LINC01220-201ENST00000558575 CAPN6Q9Y6Q1 641 aa15.83■□□□□ 0.12
LINC01220-201ENST00000558575 ATP9BO43861 1147 aa15.82■□□□□ 0.12
LINC01220-201ENST00000558575 ZNF821O75541 412 aaPredicted RBP15.82■□□□□ 0.12
LINC01220-201ENST00000558575 C1QL1O75973 258 aa15.82■□□□□ 0.12
LINC01220-201ENST00000558575 EPHX1P07099 455 aa15.82■□□□□ 0.12
LINC01220-201ENST00000558575 SRCP12931 536 aa15.82■□□□□ 0.12
LINC01220-201ENST00000558575 PEX5P50542 639 aa15.82■□□□□ 0.12
LINC01220-201ENST00000558575 PAPOLAP51003 745 aaKnown RBP15.82■□□□□ 0.12
LINC01220-201ENST00000558575 SERINC3Q13530 473 aa15.82■□□□□ 0.12
LINC01220-201ENST00000558575 CAMK2GQ13555 558 aaPredicted RBP15.82■□□□□ 0.12
LINC01220-201ENST00000558575 TAZQ16635 292 aa15.82■□□□□ 0.12
LINC01220-201ENST00000558575 HNRNPA1L2Q32P51 320 aaKnown RBP15.82■□□□□ 0.12
LINC01220-201ENST00000558575 USP39Q53GS9 565 aaKnown RBP15.82■□□□□ 0.12
LINC01220-201ENST00000558575 C9orf64Q5T6V5 341 aa15.82■□□□□ 0.12
LINC01220-201ENST00000558575 MFSD7Q6UXD7 560 aa15.82■□□□□ 0.12
LINC01220-201ENST00000558575 LEKR1Q6ZMV7 388 aa15.82■□□□□ 0.12
LINC01220-201ENST00000558575 ARHGAP36Q6ZRI8 547 aa15.82■□□□□ 0.12
LINC01220-201ENST00000558575 ARMCX6Q7L4S7 300 aa15.82■□□□□ 0.12
LINC01220-201ENST00000558575 C11orf74Q86VG3 221 aa15.82■□□□□ 0.12
LINC01220-201ENST00000558575 RASSF3Q86WH2 238 aa15.82■□□□□ 0.12
LINC01220-201ENST00000558575 TXLNBQ8N3L3 684 aa15.82■□□□□ 0.12
LINC01220-201ENST00000558575 SH2D3CQ8N5H7 860 aa15.82■□□□□ 0.12
LINC01220-201ENST00000558575 TSTD1Q8NFU3 115 aa15.82■□□□□ 0.12
LINC01220-201ENST00000558575 PTPRN2Q92932 1015 aa15.82■□□□□ 0.12
LINC01220-201ENST00000558575 RNF157Q96PX1 679 aa15.82■□□□□ 0.12
LINC01220-201ENST00000558575 ZNF670Q9BS34 389 aa15.82■□□□□ 0.12
LINC01220-201ENST00000558575 NUSAP1Q9BXS6 441 aaKnown RBP15.82■□□□□ 0.12
LINC01220-201ENST00000558575 CALN1Q9BXU9 219 aa15.82■□□□□ 0.12
LINC01220-201ENST00000558575 MKRN2Q9H000 416 aaKnown RBP15.82■□□□□ 0.12
LINC01220-201ENST00000558575 SLC6A17Q9H1V8 727 aa15.82■□□□□ 0.12
LINC01220-201ENST00000558575 GUCA1BQ9UMX6 200 aa15.82■□□□□ 0.12
LINC01220-201ENST00000558575 PCDHA3Q9Y5H8 950 aa15.82■□□□□ 0.12
LINC01220-201ENST00000558575 ATXN2Q99700 1313 aaKnown RBP15.82■□□□□ 0.12
LINC01220-201ENST00000558575 CHD5Q8TDI0 1954 aa15.82■□□□□ 0.12
LINC01220-201ENST00000558575 TCRBV21S2A2A0A5A6 115 aa15.81■□□□□ 0.12
LINC01220-201ENST00000558575 LRRD1A4D1F6 860 aa15.81■□□□□ 0.12
LINC01220-201ENST00000558575 MUC22E2RYF6 1773 aaPredicted RBP15.81■□□□□ 0.12
LINC01220-201ENST00000558575 J3KR12 359 aa15.81■□□□□ 0.12
LINC01220-201ENST00000558575 PSTPIP1O43586 416 aa15.81■□□□□ 0.12
LINC01220-201ENST00000558575 KRT1P04264 644 aa15.81■□□□□ 0.12
LINC01220-201ENST00000558575 PTMAP06454 111 aaKnown RBP15.81■□□□□ 0.12
LINC01220-201ENST00000558575 C7P10643 843 aa15.81■□□□□ 0.12
LINC01220-201ENST00000558575 GABRG2P18507 467 aa15.81■□□□□ 0.12
LINC01220-201ENST00000558575 PTGER3P43115 390 aa15.81■□□□□ 0.12
LINC01220-201ENST00000558575 COPAP53621 1224 aa15.81■□□□□ 0.12
LINC01220-201ENST00000558575 ST8SIA6P61647 398 aa15.81■□□□□ 0.12
LINC01220-201ENST00000558575 SLC10A2Q12908 348 aaPredicted RBP15.81■□□□□ 0.12
LINC01220-201ENST00000558575 E2F5Q15329 346 aa15.81■□□□□ 0.12
LINC01220-201ENST00000558575 DLG2Q15700 870 aa15.81■□□□□ 0.12
LINC01220-201ENST00000558575 ZNF423Q2M1K9 1284 aa15.81■□□□□ 0.12
LINC01220-201ENST00000558575 PARP15Q460N3 678 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms