RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 SERINC3Q13530 473 aa8.64□□□□□ -1.03
TPM1-213ENST00000558400 GRM3Q14832 879 aa8.64□□□□□ -1.03
TPM1-213ENST00000558400 PDK2Q15119 407 aa8.64□□□□□ -1.03
TPM1-213ENST00000558400 TCEAL1Q15170 157 aa8.64□□□□□ -1.03
TPM1-213ENST00000558400 SF3A2Q15428 464 aaKnown RBP8.64□□□□□ -1.03
TPM1-213ENST00000558400 SPA17Q15506 151 aa8.64□□□□□ -1.03
TPM1-213ENST00000558400 TEAD4Q15561 434 aa8.64□□□□□ -1.03
TPM1-213ENST00000558400 CCDC6Q16204 474 aa8.64□□□□□ -1.03
TPM1-213ENST00000558400 KIAA0895LQ68EN5 471 aa8.64□□□□□ -1.03
TPM1-213ENST00000558400 TBC1D3GQ6DHY5 549 aa8.64□□□□□ -1.03
TPM1-213ENST00000558400 TBC1D3CQ6IPX1 549 aa8.64□□□□□ -1.03
TPM1-213ENST00000558400 C22orf39Q6P5X5 142 aa8.64□□□□□ -1.03
TPM1-213ENST00000558400 IL27RAQ6UWB1 636 aa8.64□□□□□ -1.03
TPM1-213ENST00000558400 LINGO4Q6UY18 593 aa8.64□□□□□ -1.03
TPM1-213ENST00000558400 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.64□□□□□ -1.03
TPM1-213ENST00000558400 Q6ZVU0 165 aa8.64□□□□□ -1.03
TPM1-213ENST00000558400 POLNQ7Z5Q5 900 aa8.64□□□□□ -1.03
TPM1-213ENST00000558400 CACUL1Q86Y37 369 aa8.64□□□□□ -1.03
TPM1-213ENST00000558400 TMTC1Q8IUR5 882 aa8.64□□□□□ -1.03
TPM1-213ENST00000558400 TBC1D3Q8IZP1 549 aaPredicted RBP8.64□□□□□ -1.03
TPM1-213ENST00000558400 TC2NQ8N9U0 490 aa8.64□□□□□ -1.03
TPM1-213ENST00000558400 OR14C36Q8NHC7 312 aa8.64□□□□□ -1.03
TPM1-213ENST00000558400 SLC35G2Q8TBE7 412 aa8.64□□□□□ -1.03
TPM1-213ENST00000558400 CALR3Q96L12 384 aaKnown RBP8.64□□□□□ -1.03
TPM1-213ENST00000558400 PANX2Q96RD6 677 aa8.64□□□□□ -1.03
TPM1-213ENST00000558400 OSBPL1AQ9BXW6 950 aa8.64□□□□□ -1.03
TPM1-213ENST00000558400 CWC15Q9P013 229 aaKnown RBP8.64□□□□□ -1.03
TPM1-213ENST00000558400 HECAQ9UBI9 543 aaPredicted RBP8.64□□□□□ -1.03
TPM1-213ENST00000558400 IL36AQ9UHA7 158 aa8.64□□□□□ -1.03
TPM1-213ENST00000558400 NEU3Q9UQ49 428 aa8.64□□□□□ -1.03
TPM1-213ENST00000558400 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.64□□□□□ -1.03
TPM1-213ENST00000558400 THADAQ6YHU6 1953 aa8.64□□□□□ -1.03
TPM1-213ENST00000558400 CKAP5Q14008 2032 aa8.63□□□□□ -1.03
TPM1-213ENST00000558400 FAM47DPA6NHR8 397 aa8.63□□□□□ -1.03
TPM1-213ENST00000558400 GOLGA6L6A8MZA4 724 aa8.63□□□□□ -1.03
TPM1-213ENST00000558400 KPNA3O00505 521 aaPredicted RBP8.63□□□□□ -1.03
TPM1-213ENST00000558400 ARHGAP33O14559 1287 aa8.63□□□□□ -1.03
TPM1-213ENST00000558400 ZNF821O75541 412 aaPredicted RBP8.63□□□□□ -1.03
TPM1-213ENST00000558400 MTA2O94776 668 aa8.63□□□□□ -1.03
TPM1-213ENST00000558400 IPO7O95373 1038 aaKnown RBP8.63□□□□□ -1.03
TPM1-213ENST00000558400 CD160O95971 181 aa8.63□□□□□ -1.03
TPM1-213ENST00000558400 GSRP00390 522 aa8.63□□□□□ -1.03
TPM1-213ENST00000558400 CFIP05156 583 aa8.63□□□□□ -1.03
TPM1-213ENST00000558400 VAV1P15498 845 aa8.63□□□□□ -1.03
TPM1-213ENST00000558400 GLDCP23378 1020 aa8.63□□□□□ -1.03
TPM1-213ENST00000558400 MAOBP27338 520 aa8.63□□□□□ -1.03
TPM1-213ENST00000558400 IL1R2P27930 398 aa8.63□□□□□ -1.03
TPM1-213ENST00000558400 MAN1A1P33908 653 aa8.63□□□□□ -1.03
TPM1-213ENST00000558400 SERPINB6P35237 376 aa8.63□□□□□ -1.03
TPM1-213ENST00000558400 SLC1A1P43005 524 aa8.63□□□□□ -1.03
TPM1-213ENST00000558400 MAGEA1P43355 309 aa8.63□□□□□ -1.03
TPM1-213ENST00000558400 NUMBP49757 651 aa8.63□□□□□ -1.03
TPM1-213ENST00000558400 AFF3P51826 1226 aaKnown RBP8.63□□□□□ -1.03
TPM1-213ENST00000558400 RACK1P63244 317 aaKnown RBP8.63□□□□□ -1.03
TPM1-213ENST00000558400 KRT81Q14533 505 aa8.63□□□□□ -1.03
TPM1-213ENST00000558400 RFTN1Q14699 578 aaPredicted RBP8.63□□□□□ -1.03
TPM1-213ENST00000558400 CA9Q16790 459 aa8.63□□□□□ -1.03
TPM1-213ENST00000558400 MYLK3Q32MK0 819 aa8.63□□□□□ -1.03
TPM1-213ENST00000558400 ARSIQ5FYB1 569 aa8.63□□□□□ -1.03
TPM1-213ENST00000558400 KCNT1Q5JUK3 1230 aa8.63□□□□□ -1.03
TPM1-213ENST00000558400 STPG1Q5TH74 334 aa8.63□□□□□ -1.03
TPM1-213ENST00000558400 NCEH1Q6PIU2 408 aa8.63□□□□□ -1.03
TPM1-213ENST00000558400 TMCO3Q6UWJ1 677 aa8.63□□□□□ -1.03
TPM1-213ENST00000558400 DPY19L3Q6ZPD9 716 aa8.63□□□□□ -1.03
TPM1-213ENST00000558400 CYP4V2Q6ZWL3 525 aaPredicted RBP8.63□□□□□ -1.03
TPM1-213ENST00000558400 PRPF39Q86UA1 669 aaKnown RBP8.63□□□□□ -1.03
TPM1-213ENST00000558400 ZSCAN30Q86W11 494 aa8.63□□□□□ -1.03
TPM1-213ENST00000558400 GAS2L3Q86XJ1 694 aa8.63□□□□□ -1.03
TPM1-213ENST00000558400 AADATQ8N5Z0 425 aa8.63□□□□□ -1.03
TPM1-213ENST00000558400 KCTD6Q8NC69 237 aa8.63□□□□□ -1.03
TPM1-213ENST00000558400 OR2AP1Q8NGE2 309 aa8.63□□□□□ -1.03
TPM1-213ENST00000558400 HCAR2Q8TDS4 363 aa8.63□□□□□ -1.03
TPM1-213ENST00000558400 HSPH1Q92598 858 aa8.63□□□□□ -1.03
TPM1-213ENST00000558400 RAB7BQ96AH8 199 aa8.63□□□□□ -1.03
TPM1-213ENST00000558400 FAM131CQ96AQ9 280 aa8.63□□□□□ -1.03
TPM1-213ENST00000558400 BIRC7Q96CA5 298 aa8.63□□□□□ -1.03
TPM1-213ENST00000558400 ARHGEF26Q96DR7 871 aa8.63□□□□□ -1.03
TPM1-213ENST00000558400 HMCESQ96FZ2 354 aa8.63□□□□□ -1.03
TPM1-213ENST00000558400 PEBP4Q96S96 227 aa8.63□□□□□ -1.03
TPM1-213ENST00000558400 KCTD15Q96SI1 283 aaPredicted RBP8.63□□□□□ -1.03
TPM1-213ENST00000558400 HDAC8Q9BY41 377 aa8.63□□□□□ -1.03
TPM1-213ENST00000558400 CPEB1Q9BZB8 566 aaKnown RBP8.63□□□□□ -1.03
TPM1-213ENST00000558400 MIR1-1HGQ9H1L0 117 aa8.63□□□□□ -1.03
TPM1-213ENST00000558400 C6orf106Q9H6K1 298 aaPredicted RBP8.63□□□□□ -1.03
TPM1-213ENST00000558400 NOL6Q9H6R4 1146 aaKnown RBP8.63□□□□□ -1.03
TPM1-213ENST00000558400 LRRC19Q9H756 370 aa8.63□□□□□ -1.03
TPM1-213ENST00000558400 CAPN10Q9HC96 672 aa8.63□□□□□ -1.03
TPM1-213ENST00000558400 PREBQ9HCU5 417 aa8.63□□□□□ -1.03
TPM1-213ENST00000558400 CD93Q9NPY3 652 aa8.63□□□□□ -1.03
TPM1-213ENST00000558400 TMEM9BQ9NQ34 198 aa8.63□□□□□ -1.03
TPM1-213ENST00000558400 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.63□□□□□ -1.03
TPM1-213ENST00000558400 GPATCH2LQ9NWQ4 482 aa8.63□□□□□ -1.03
TPM1-213ENST00000558400 IMPACTQ9P2X3 320 aa8.63□□□□□ -1.03
TPM1-213ENST00000558400 EIF2B4Q9UI10 523 aaKnown RBP8.63□□□□□ -1.03
TPM1-213ENST00000558400 ANGPTL2Q9UKU9 493 aa8.63□□□□□ -1.03
TPM1-213ENST00000558400 SARDHQ9UL12 918 aa8.63□□□□□ -1.03
TPM1-213ENST00000558400 MFHAS1Q9Y4C4 1052 aa8.63□□□□□ -1.03
TPM1-213ENST00000558400 A0A1W2PPC4 97 aa8.62□□□□□ -1.03
TPM1-213ENST00000558400 LNP1A1A4G5 178 aa8.62□□□□□ -1.03
TPM1-213ENST00000558400 PATE3B3GLJ2 98 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms