RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 CAV1Q03135 178 aa10.54□□□□□ -0.72
TPM1-212ENST00000558347 EIF4EBP2Q13542 120 aaPredicted RBP10.54□□□□□ -0.72
TPM1-212ENST00000558347 TNFAIP8L3Q5GJ75 292 aa10.54□□□□□ -0.72
TPM1-212ENST00000558347 ERMARDQ5T6L9 678 aa10.54□□□□□ -0.72
TPM1-212ENST00000558347 TTC27Q6P3X3 843 aa10.54□□□□□ -0.72
TPM1-212ENST00000558347 CHST9Q7L1S5 443 aa10.54□□□□□ -0.72
TPM1-212ENST00000558347 LPCAT2Q7L5N7 544 aa10.54□□□□□ -0.72
TPM1-212ENST00000558347 KIAA0907Q7Z7F0 614 aaPredicted RBP10.54□□□□□ -0.72
TPM1-212ENST00000558347 DEFB119Q8N690 84 aa10.54□□□□□ -0.72
TPM1-212ENST00000558347 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.54□□□□□ -0.72
TPM1-212ENST00000558347 FBXO25Q8TCJ0 367 aa10.54□□□□□ -0.72
TPM1-212ENST00000558347 GRK7Q8WTQ7 553 aa10.54□□□□□ -0.72
TPM1-212ENST00000558347 UCMAQ8WVF2 138 aa10.54□□□□□ -0.72
TPM1-212ENST00000558347 RAPGEF5Q92565 580 aa10.54□□□□□ -0.72
TPM1-212ENST00000558347 PIGKQ92643 395 aa10.54□□□□□ -0.72
TPM1-212ENST00000558347 CNPY3Q9BT09 278 aa10.54□□□□□ -0.72
TPM1-212ENST00000558347 TRIM31Q9BZY9 425 aa10.54□□□□□ -0.72
TPM1-212ENST00000558347 MKRN2Q9H000 416 aaKnown RBP10.54□□□□□ -0.72
TPM1-212ENST00000558347 PPANQ9NQ55 473 aaKnown RBP10.54□□□□□ -0.72
TPM1-212ENST00000558347 TMEM74BQ9NUR3 256 aa10.54□□□□□ -0.72
TPM1-212ENST00000558347 LNP1A1A4G5 178 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 NPC1O15118 1278 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 RGS16O15492 202 aaPredicted RBP10.53□□□□□ -0.72
TPM1-212ENST00000558347 GRAP2O75791 330 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 ECEL1O95672 775 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 TRUB2O95900 331 aaKnown RBP10.53□□□□□ -0.72
TPM1-212ENST00000558347 RARAP10276 462 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 PABPC1P11940 636 aaKnown RBP10.53□□□□□ -0.72
TPM1-212ENST00000558347 HLA-EP13747 358 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 ITIH2P19823 946 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 DRD4P21917 467 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 CD70P32970 193 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 PTPN9P43378 593 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 MARCKSL1P49006 195 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 COPAP53621 1224 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 LIMK1P53667 647 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 SEC24CP53992 1094 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 RPS24P62847 133 aaKnown RBP10.53□□□□□ -0.72
TPM1-212ENST00000558347 RPL6Q02878 288 aaKnown RBP10.53□□□□□ -0.72
TPM1-212ENST00000558347 STARD3Q14849 445 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 SKIDA1Q1XH10 827 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 LACTB2Q53H82 288 aaPredicted RBP10.53□□□□□ -0.72
TPM1-212ENST00000558347 ZC3H12AQ5D1E8 599 aaKnown RBP10.53□□□□□ -0.72
TPM1-212ENST00000558347 MS4A13Q5J8X5 152 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 MPP7Q5T2T1 576 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 STPG1Q5TH74 334 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 LRRC38Q5VT99 294 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 KIAA1324Q6UXG2 1013 aaKnown RBP10.53□□□□□ -0.72
TPM1-212ENST00000558347 CEP128Q6ZU80 1094 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 CCDC121Q6ZUS5 278 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 ADAT2Q7Z6V5 191 aaKnown RBP10.53□□□□□ -0.72
TPM1-212ENST00000558347 ADIPOR2Q86V24 386 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 CACNA2D3Q8IZS8 1091 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 DEFB106AQ8N104 65 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 EMC1Q8N766 993 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 WFIKKN2Q8TEU8 576 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 CYB5D2Q8WUJ1 264 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 RXFP2Q8WXD0 754 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 RNF25Q96BH1 459 aaPredicted RBP10.53□□□□□ -0.72
TPM1-212ENST00000558347 SLC2A13Q96QE2 648 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 NCAPGQ9BPX3 1015 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 EDEM2Q9BV94 578 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 TRIM62Q9BVG3 475 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 RABEP2Q9H5N1 569 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 SYNJ2BP-COX16A0A087WUM0 186 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 ANKRD65E5RJM6 399 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 ZBTB24O43167 697 aaPredicted RBP10.53□□□□□ -0.72
TPM1-212ENST00000558347 RIPK2O43353 540 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 PSTPIP1O43586 416 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 TIMM44O43615 452 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 ZNF217O75362 1048 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 DAB1O75553 588 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 EPHX1P07099 455 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 PDGFRAP16234 1089 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 ITPKAP23677 461 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 PSMA2P25787 234 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 ATP5DP30049 168 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 PCK1P35558 622 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 ACTN3Q08043 901 aaPredicted RBP10.53□□□□□ -0.72
TPM1-212ENST00000558347 CALCOCO2Q13137 446 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 PTK6Q13882 451 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 PTPRNQ16849 979 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 DCAF6Q58WW2 860 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 GKAP1Q5VSY0 366 aaPredicted RBP10.53□□□□□ -0.72
TPM1-212ENST00000558347 LYSMD4Q5XG99 296 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 MBLAC2Q68D91 279 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 TRNP1Q6NT89 227 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 SERPINA13PQ6UXR4 307 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 TAOK1Q7L7X3 1001 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 TMPRSS6Q8IU80 811 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 MFN1Q8IWA4 741 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 AHI1Q8N157 1196 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 ZNF366Q8N895 744 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 HJURPQ8NCD3 748 aaPredicted RBP10.53□□□□□ -0.72
TPM1-212ENST00000558347 CENPIQ92674 756 aaPredicted RBP10.53□□□□□ -0.72
TPM1-212ENST00000558347 CHMP6Q96FZ7 201 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 SEC16BQ96JE7 1060 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 LMLNQ96KR4 655 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 TMEM245Q9H330 911 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 PRDM16Q9HAZ2 1276 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms