RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 RPL22P35268 128 aaKnown RBP12.61□□□□□ -0.39
TPM1-209ENST00000558072 RHOAP61586 193 aa12.61□□□□□ -0.39
TPM1-209ENST00000558072 AP1S1P61966 158 aa12.61□□□□□ -0.39
TPM1-209ENST00000558072 PRKCQQ04759 706 aa12.61□□□□□ -0.39
TPM1-209ENST00000558072 KDSRQ06136 332 aa12.61□□□□□ -0.39
TPM1-209ENST00000558072 ITKQ08881 620 aa12.61□□□□□ -0.39
TPM1-209ENST00000558072 WASHC5Q12768 1159 aa12.61□□□□□ -0.39
TPM1-209ENST00000558072 GRSF1Q12849 480 aaKnown RBP eCLIP12.61□□□□□ -0.39
TPM1-209ENST00000558072 MPP3Q13368 585 aa12.61□□□□□ -0.39
TPM1-209ENST00000558072 KCTD19Q17RG1 926 aaPredicted RBP12.61□□□□□ -0.39
TPM1-209ENST00000558072 HSF5Q4G112 596 aaPredicted RBP12.61□□□□□ -0.39
TPM1-209ENST00000558072 ASTLQ6HA08 431 aaPredicted RBP12.61□□□□□ -0.39
TPM1-209ENST00000558072 SDE2Q6IQ49 451 aa12.61□□□□□ -0.39
TPM1-209ENST00000558072 WDR93Q6P2C0 686 aa12.61□□□□□ -0.39
TPM1-209ENST00000558072 TP53INP2Q8IXH6 220 aa12.61□□□□□ -0.39
TPM1-209ENST00000558072 UBALD2Q8IYN6 164 aa12.61□□□□□ -0.39
TPM1-209ENST00000558072 LRRN4Q8WUT4 740 aa12.61□□□□□ -0.39
TPM1-209ENST00000558072 AGAP3Q96P47 875 aa12.61□□□□□ -0.39
TPM1-209ENST00000558072 RHOXF2Q9BQY4 288 aa12.61□□□□□ -0.39
TPM1-209ENST00000558072 CIPCQ9C0C6 399 aa12.61□□□□□ -0.39
TPM1-209ENST00000558072 GLOD4Q9HC38 313 aa12.61□□□□□ -0.39
TPM1-209ENST00000558072 EPB41L5Q9HCM4 733 aa12.61□□□□□ -0.39
TPM1-209ENST00000558072 RAB6BQ9NRW1 208 aa12.61□□□□□ -0.39
TPM1-209ENST00000558072 ARGLU1Q9NWB6 273 aaPredicted RBP12.61□□□□□ -0.39
TPM1-209ENST00000558072 SUN2Q9UH99 717 aa12.61□□□□□ -0.39
TPM1-209ENST00000558072 MUTYHQ9UIF7 546 aa12.61□□□□□ -0.39
TPM1-209ENST00000558072 ANAPC5Q9UJX4 755 aa12.61□□□□□ -0.39
TPM1-209ENST00000558072 SORCS3Q9UPU3 1222 aa12.61□□□□□ -0.39
TPM1-209ENST00000558072 SHOC2Q9UQ13 582 aa12.61□□□□□ -0.39
TPM1-209ENST00000558072 STARD13Q9Y3M8 1113 aa12.61□□□□□ -0.39
TPM1-209ENST00000558072 ARIH1Q9Y4X5 557 aaPredicted RBP12.61□□□□□ -0.39
TPM1-209ENST00000558072 NYNRINQ9P2P1 1898 aaKnown RBP12.6□□□□□ -0.39
TPM1-209ENST00000558072 C19orf67A6NJJ6 358 aa12.6□□□□□ -0.39
TPM1-209ENST00000558072 SPECC1L-ADORA2AF8WAN1 911 aa12.6□□□□□ -0.39
TPM1-209ENST00000558072 ATP9BO43861 1147 aa12.6□□□□□ -0.39
TPM1-209ENST00000558072 TMCC1O94876 653 aa12.6□□□□□ -0.39
TPM1-209ENST00000558072 PEX11BO96011 259 aa12.6□□□□□ -0.39
TPM1-209ENST00000558072 GSRP00390 522 aa12.6□□□□□ -0.39
TPM1-209ENST00000558072 TPSB2P20231 275 aa12.6□□□□□ -0.39
TPM1-209ENST00000558072 CTHP32929 405 aa12.6□□□□□ -0.39
TPM1-209ENST00000558072 OPRD1P41143 372 aa12.6□□□□□ -0.39
TPM1-209ENST00000558072 MAGEA6P43360 314 aa12.6□□□□□ -0.39
TPM1-209ENST00000558072 SLC6A11P48066 632 aa12.6□□□□□ -0.39
TPM1-209ENST00000558072 GDF10P55107 478 aa12.6□□□□□ -0.39
TPM1-209ENST00000558072 BASP1P80723 227 aaKnown RBP12.6□□□□□ -0.39
TPM1-209ENST00000558072 ARF5P84085 180 aa12.6□□□□□ -0.39
TPM1-209ENST00000558072 SEMA5AQ13591 1074 aa12.6□□□□□ -0.39
TPM1-209ENST00000558072 LAMB3Q13751 1172 aa12.6□□□□□ -0.39
TPM1-209ENST00000558072 TPSAB1Q15661 275 aa12.6□□□□□ -0.39
TPM1-209ENST00000558072 FUT11Q495W5 492 aa12.6□□□□□ -0.39
TPM1-209ENST00000558072 ALG1LQ6GMV1 187 aa12.6□□□□□ -0.39
TPM1-209ENST00000558072 NAPEPLDQ6IQ20 393 aa12.6□□□□□ -0.39
TPM1-209ENST00000558072 ARHGAP36Q6ZRI8 547 aa12.6□□□□□ -0.39
TPM1-209ENST00000558072 ADIPOR2Q86V24 386 aa12.6□□□□□ -0.39
TPM1-209ENST00000558072 RNF135Q8IUD6 432 aa12.6□□□□□ -0.39
TPM1-209ENST00000558072 APCDD1Q8J025 514 aa12.6□□□□□ -0.39
TPM1-209ENST00000558072 NDUFAF2Q8N183 169 aa12.6□□□□□ -0.39
TPM1-209ENST00000558072 SH2D3CQ8N5H7 860 aa12.6□□□□□ -0.39
TPM1-209ENST00000558072 MCUQ8NE86 351 aa12.6□□□□□ -0.39
TPM1-209ENST00000558072 CCDC110Q8TBZ0 833 aa12.6□□□□□ -0.39
TPM1-209ENST00000558072 LRIG1Q96JA1 1093 aa12.6□□□□□ -0.39
TPM1-209ENST00000558072 GDAP1L1Q96MZ0 367 aa12.6□□□□□ -0.39
TPM1-209ENST00000558072 NUDCD1Q96RS6 583 aa12.6□□□□□ -0.39
TPM1-209ENST00000558072 SRPK1Q96SB4 655 aaKnown RBP12.6□□□□□ -0.39
TPM1-209ENST00000558072 NELL2Q99435 816 aa12.6□□□□□ -0.39
TPM1-209ENST00000558072 MGME1Q9BQP7 344 aa12.6□□□□□ -0.39
TPM1-209ENST00000558072 PHACTR1Q9C0D0 580 aa12.6□□□□□ -0.39
TPM1-209ENST00000558072 LRRC40Q9H9A6 602 aa12.6□□□□□ -0.39
TPM1-209ENST00000558072 NT5MQ9NPB1 228 aa12.6□□□□□ -0.39
TPM1-209ENST00000558072 GDF3Q9NR23 364 aa12.6□□□□□ -0.39
TPM1-209ENST00000558072 HEBP1Q9NRV9 189 aa12.6□□□□□ -0.39
TPM1-209ENST00000558072 FAM153AQ9UHL3 310 aa12.6□□□□□ -0.39
TPM1-209ENST00000558072 DUSP12Q9UNI6 340 aa12.6□□□□□ -0.39
TPM1-209ENST00000558072 ERVW-1Q9UQF0 538 aa12.6□□□□□ -0.39
TPM1-209ENST00000558072 PIAS3Q9Y6X2 628 aa12.6□□□□□ -0.39
TPM1-209ENST00000558072 UNC80Q8N2C7 3258 aa12.6□□□□□ -0.39
TPM1-209ENST00000558072 MYO10Q9HD67 2058 aa12.59□□□□□ -0.39
TPM1-209ENST00000558072 ZBTB24O43167 697 aaPredicted RBP12.59□□□□□ -0.39
TPM1-209ENST00000558072 SNAP91O60641 907 aa12.59□□□□□ -0.39
TPM1-209ENST00000558072 SEC31AO94979 1220 aaKnown RBP12.59□□□□□ -0.39
TPM1-209ENST00000558072 POP4O95707 220 aaKnown RBP12.59□□□□□ -0.39
TPM1-209ENST00000558072 EPOP01588 193 aa12.59□□□□□ -0.39
TPM1-209ENST00000558072 HNRNPLP14866 589 aaKnown RBP eCLIP12.59□□□□□ -0.395e-14■■□□□ 11.6
TPM1-209ENST00000558072 SLC7A5Q01650 507 aa12.59□□□□□ -0.39
TPM1-209ENST00000558072 SLC10A7Q0GE19 358 aa12.59□□□□□ -0.39
TPM1-209ENST00000558072 ZBTB17Q13105 803 aa12.59□□□□□ -0.39
TPM1-209ENST00000558072 HLTFQ14527 1009 aaKnown RBP eCLIP12.59□□□□□ -0.39
TPM1-209ENST00000558072 GEN1Q17RS7 908 aa12.59□□□□□ -0.39
TPM1-209ENST00000558072 ERCC6LQ2NKX8 1250 aa12.59□□□□□ -0.39
TPM1-209ENST00000558072 IZUMO3Q5VZ72 239 aa12.59□□□□□ -0.39
TPM1-209ENST00000558072 TXNDC11Q6PKC3 985 aa12.59□□□□□ -0.39
TPM1-209ENST00000558072 B4GALNT4Q76KP1 1039 aa12.59□□□□□ -0.39
TPM1-209ENST00000558072 DSG4Q86SJ6 1040 aa12.59□□□□□ -0.39
TPM1-209ENST00000558072 TUBGCP5Q96RT8 1024 aa12.59□□□□□ -0.39
TPM1-209ENST00000558072 FBRSQ9HAH7 460 aa12.59□□□□□ -0.39
TPM1-209ENST00000558072 XAB2Q9HCS7 855 aaKnown RBP12.59□□□□□ -0.39
TPM1-209ENST00000558072 ZDHHC4Q9NPG8 344 aa12.59□□□□□ -0.39
TPM1-209ENST00000558072 SCUBE2Q9NQ36 999 aa12.59□□□□□ -0.39
TPM1-209ENST00000558072 WNT16Q9UBV4 365 aa12.59□□□□□ -0.39
TPM1-209ENST00000558072 INTS6Q9UL03 887 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms