RNA–Protein interactions for RNA: ENST00000557749.5

LINC00648-204, long intergenic non-protein coding RNA 648, humanhuman

TSL 5 BASIC

Gene LINC00648, Length 443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-204ENST00000557749 TMEM229AB2RXF0 380 aa11.66□□□□□ -0.54
LINC00648-204ENST00000557749 CBX4O00257 560 aa11.66□□□□□ -0.54
LINC00648-204ENST00000557749 FLRT2O43155 660 aa11.66□□□□□ -0.54
LINC00648-204ENST00000557749 RAMP2O60895 175 aa11.66□□□□□ -0.54
LINC00648-204ENST00000557749 RNGTTO60942 597 aaKnown RBP11.66□□□□□ -0.54
LINC00648-204ENST00000557749 RNF8O76064 485 aa11.66□□□□□ -0.54
LINC00648-204ENST00000557749 SRCP12931 536 aa11.66□□□□□ -0.54
LINC00648-204ENST00000557749 TFE3P19532 575 aaPredicted RBP11.66□□□□□ -0.54
LINC00648-204ENST00000557749 L1CAMP32004 1257 aa11.66□□□□□ -0.54
LINC00648-204ENST00000557749 RFC1P35251 1148 aaPredicted RBP11.66□□□□□ -0.54
LINC00648-204ENST00000557749 PRKCIP41743 596 aa11.66□□□□□ -0.54
LINC00648-204ENST00000557749 GALCP54803 685 aa11.66□□□□□ -0.54
LINC00648-204ENST00000557749 ADPRHP54922 357 aa11.66□□□□□ -0.54
LINC00648-204ENST00000557749 GNA12Q03113 381 aa11.66□□□□□ -0.54
LINC00648-204ENST00000557749 KLHL30Q0D2K2 578 aa11.66□□□□□ -0.54
LINC00648-204ENST00000557749 ZNF252P-AS1Q0IIN9 211 aa11.66□□□□□ -0.54
LINC00648-204ENST00000557749 CLN3Q13286 438 aa11.66□□□□□ -0.54
LINC00648-204ENST00000557749 POLD3Q15054 466 aaPredicted RBP11.66□□□□□ -0.54
LINC00648-204ENST00000557749 ZNF423Q2M1K9 1284 aa11.66□□□□□ -0.54
LINC00648-204ENST00000557749 ALFQ53S48 1182 aa11.66□□□□□ -0.54
LINC00648-204ENST00000557749 RWDD4Q6NW29 188 aaKnown RBP11.66□□□□□ -0.54
LINC00648-204ENST00000557749 NCEH1Q6PIU2 408 aa11.66□□□□□ -0.54
LINC00648-204ENST00000557749 PRPF39Q86UA1 669 aaKnown RBP11.66□□□□□ -0.54
LINC00648-204ENST00000557749 PSTKQ8IV42 348 aaKnown RBP11.66□□□□□ -0.54
LINC00648-204ENST00000557749 MCOLN2Q8IZK6 566 aa11.66□□□□□ -0.54
LINC00648-204ENST00000557749 OR14C36Q8NHC7 312 aa11.66□□□□□ -0.54
LINC00648-204ENST00000557749 FNIP1Q8TF40 1166 aa11.66□□□□□ -0.54
LINC00648-204ENST00000557749 SYN2Q92777 582 aaPredicted RBP11.66□□□□□ -0.54
LINC00648-204ENST00000557749 FAM131CQ96AQ9 280 aa11.66□□□□□ -0.54
LINC00648-204ENST00000557749 ISG20Q96AZ6 181 aaKnown RBP11.66□□□□□ -0.54
LINC00648-204ENST00000557749 MCEEQ96PE7 176 aa11.66□□□□□ -0.54
LINC00648-204ENST00000557749 PCDHB18PQ96TA0 734 aa11.66□□□□□ -0.54
LINC00648-204ENST00000557749 FAM129BQ96TA1 746 aa11.66□□□□□ -0.54
LINC00648-204ENST00000557749 CDC6Q99741 560 aa11.66□□□□□ -0.54
LINC00648-204ENST00000557749 SPON2Q9BUD6 331 aa11.66□□□□□ -0.54
LINC00648-204ENST00000557749 NEUROG2Q9H2A3 272 aa11.66□□□□□ -0.54
LINC00648-204ENST00000557749 TM9SF3Q9HD45 589 aa11.66□□□□□ -0.54
LINC00648-204ENST00000557749 TMEM248Q9NWD8 314 aa11.66□□□□□ -0.54
LINC00648-204ENST00000557749 VPS51Q9UID3 782 aa11.66□□□□□ -0.54
LINC00648-204ENST00000557749 PPM1HQ9ULR3 514 aa11.66□□□□□ -0.54
LINC00648-204ENST00000557749 PCDH15Q96QU1 1955 aa11.66□□□□□ -0.54
LINC00648-204ENST00000557749 SPTBN2O15020 2390 aa11.65□□□□□ -0.54
LINC00648-204ENST00000557749 NCOR2Q9Y618 2525 aa11.65□□□□□ -0.54
LINC00648-204ENST00000557749 TBC1D3DA0A087WVF3 549 aa11.65□□□□□ -0.54
LINC00648-204ENST00000557749 TBC1D3IA0A087WXS9 549 aa11.65□□□□□ -0.54
LINC00648-204ENST00000557749 TBC1D3EA0A087X179 549 aa11.65□□□□□ -0.54
LINC00648-204ENST00000557749 TBC1D3KA0A087X1G2 549 aa11.65□□□□□ -0.54
LINC00648-204ENST00000557749 TBC1D3FA6NER0 549 aaPredicted RBP11.65□□□□□ -0.54
LINC00648-204ENST00000557749 FAM47DPA6NHR8 397 aa11.65□□□□□ -0.54
LINC00648-204ENST00000557749 LRRC53A6NM62 1247 aa11.65□□□□□ -0.54
LINC00648-204ENST00000557749 TBC1D3LB9A6J9 549 aa11.65□□□□□ -0.54
LINC00648-204ENST00000557749 VILLO15195 856 aa11.65□□□□□ -0.54
LINC00648-204ENST00000557749 CNTN5O94779 1100 aa11.65□□□□□ -0.54
LINC00648-204ENST00000557749 PLEKP08567 350 aaPredicted RBP11.65□□□□□ -0.54
LINC00648-204ENST00000557749 TBC1D3HP0C7X1 549 aa11.65□□□□□ -0.54
LINC00648-204ENST00000557749 MAOBP27338 520 aa11.65□□□□□ -0.54
LINC00648-204ENST00000557749 PMLP29590 882 aa11.65□□□□□ -0.54
LINC00648-204ENST00000557749 SERPINH1P50454 418 aaKnown RBP11.65□□□□□ -0.54
LINC00648-204ENST00000557749 CCT8P50990 548 aa11.65□□□□□ -0.54
LINC00648-204ENST00000557749 HDAC4P56524 1084 aa11.65□□□□□ -0.54
LINC00648-204ENST00000557749 UBASH3AP57075 661 aa11.65□□□□□ -0.54
LINC00648-204ENST00000557749 YBEYP58557 167 aaPredicted RBP11.65□□□□□ -0.54
LINC00648-204ENST00000557749 ACAP1Q15027 740 aa11.65□□□□□ -0.54
LINC00648-204ENST00000557749 IQCB1Q15051 598 aa11.65□□□□□ -0.54
LINC00648-204ENST00000557749 C15orf59Q2T9L4 293 aaPredicted RBP11.65□□□□□ -0.54
LINC00648-204ENST00000557749 PARP15Q460N3 678 aa11.65□□□□□ -0.54
LINC00648-204ENST00000557749 SETMARQ53H47 684 aaPredicted RBP11.65□□□□□ -0.54
LINC00648-204ENST00000557749 N4BP2L1Q5TBK1 243 aaPredicted RBP11.65□□□□□ -0.54
LINC00648-204ENST00000557749 MANEALQ5VSG8 457 aa11.65□□□□□ -0.54
LINC00648-204ENST00000557749 TBC1D3GQ6DHY5 549 aa11.65□□□□□ -0.54
LINC00648-204ENST00000557749 TBC1D3CQ6IPX1 549 aa11.65□□□□□ -0.54
LINC00648-204ENST00000557749 TRNP1Q6NT89 227 aa11.65□□□□□ -0.54
LINC00648-204ENST00000557749 C22orf39Q6P5X5 142 aa11.65□□□□□ -0.54
LINC00648-204ENST00000557749 WDR59Q6PJI9 974 aa11.65□□□□□ -0.54
LINC00648-204ENST00000557749 IRF2BP2Q7Z5L9 587 aa11.65□□□□□ -0.54
LINC00648-204ENST00000557749 PIP4P1Q86T03 277 aa11.65□□□□□ -0.54
LINC00648-204ENST00000557749 IQCHQ86VS3 1027 aa11.65□□□□□ -0.54
LINC00648-204ENST00000557749 TRIM69Q86WT6 500 aa11.65□□□□□ -0.54
LINC00648-204ENST00000557749 TBC1D3Q8IZP1 549 aaPredicted RBP11.65□□□□□ -0.54
LINC00648-204ENST00000557749 C1orf216Q8TAB5 229 aa11.65□□□□□ -0.54
LINC00648-204ENST00000557749 JOSD2Q8TAC2 188 aa11.65□□□□□ -0.54
LINC00648-204ENST00000557749 PIP4K2CQ8TBX8 421 aa11.65□□□□□ -0.54
LINC00648-204ENST00000557749 RNF217Q8TC41 542 aa11.65□□□□□ -0.54
LINC00648-204ENST00000557749 ARHGEF26Q96DR7 871 aa11.65□□□□□ -0.54
LINC00648-204ENST00000557749 FUCA2Q9BTY2 467 aa11.65□□□□□ -0.54
LINC00648-204ENST00000557749 GAREM1Q9H706 876 aa11.65□□□□□ -0.54
LINC00648-204ENST00000557749 MPP6Q9NZW5 540 aa11.65□□□□□ -0.54
LINC00648-204ENST00000557749 DOCK4Q8N1I0 1966 aa11.65□□□□□ -0.55
LINC00648-204ENST00000557749 ASCC3Q8N3C0 2202 aaKnown RBP11.64□□□□□ -0.55
LINC00648-204ENST00000557749 NYNRINQ9P2P1 1898 aaKnown RBP11.64□□□□□ -0.55
LINC00648-204ENST00000557749 TTLL8A6PVC2 850 aa11.64□□□□□ -0.55
LINC00648-204ENST00000557749 KPNA3O00505 521 aaPredicted RBP11.64□□□□□ -0.55
LINC00648-204ENST00000557749 TEX33O43247 280 aa11.64□□□□□ -0.55
LINC00648-204ENST00000557749 CBFA2T2O43439 604 aa11.64□□□□□ -0.55
LINC00648-204ENST00000557749 LATO43561 262 aa11.64□□□□□ -0.55
LINC00648-204ENST00000557749 PLRG1O43660 514 aaKnown RBP11.64□□□□□ -0.55
LINC00648-204ENST00000557749 RTN2O75298 545 aa11.64□□□□□ -0.55
LINC00648-204ENST00000557749 LRIG2O94898 1065 aa11.64□□□□□ -0.55
LINC00648-204ENST00000557749 RRM1P23921 792 aa11.64□□□□□ -0.55
LINC00648-204ENST00000557749 EPHB2P29323 1055 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms