RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 POM121BA6NF01 834 aa16.26■□□□□ 0.19
SCFD1-224ENST00000557713 NEMP2A6NFY4 417 aa16.26■□□□□ 0.19
SCFD1-224ENST00000557713 A6NNZ2 444 aa16.26■□□□□ 0.19
SCFD1-224ENST00000557713 ATXN7O15265 892 aaPredicted RBP16.26■□□□□ 0.19
SCFD1-224ENST00000557713 AP1G1O43747 822 aa16.26■□□□□ 0.19
SCFD1-224ENST00000557713 ALPPL2P10696 532 aa16.26■□□□□ 0.19
SCFD1-224ENST00000557713 MYF5P13349 255 aa16.26■□□□□ 0.19
SCFD1-224ENST00000557713 ADRB3P13945 408 aa16.26■□□□□ 0.19
SCFD1-224ENST00000557713 ITGB7P26010 798 aa16.26■□□□□ 0.19
SCFD1-224ENST00000557713 UBE2HP62256 183 aa16.26■□□□□ 0.19
SCFD1-224ENST00000557713 RPS21P63220 83 aaKnown RBP16.26■□□□□ 0.19
SCFD1-224ENST00000557713 GNA12Q03113 381 aa16.26■□□□□ 0.19
SCFD1-224ENST00000557713 FZD2Q14332 565 aa16.26■□□□□ 0.19
SCFD1-224ENST00000557713 TPD52L1Q16890 204 aaPredicted RBP16.26■□□□□ 0.19
SCFD1-224ENST00000557713 ZNF542PQ5EBM4 170 aa16.26■□□□□ 0.19
SCFD1-224ENST00000557713 KLHDC7AQ5VTJ3 777 aa16.26■□□□□ 0.19
SCFD1-224ENST00000557713 TAF3Q5VWG9 929 aa16.26■□□□□ 0.19
SCFD1-224ENST00000557713 KIAA1161Q6NSJ0 714 aa16.26■□□□□ 0.19
SCFD1-224ENST00000557713 ARCQ7LC44 396 aa16.26■□□□□ 0.19
SCFD1-224ENST00000557713 PCDH20Q8N6Y1 951 aaKnown RBP16.26■□□□□ 0.19
SCFD1-224ENST00000557713 FAM181AQ8N9Y4 354 aa16.26■□□□□ 0.19
SCFD1-224ENST00000557713 LSM14AQ8ND56 463 aaKnown RBP16.26■□□□□ 0.19
SCFD1-224ENST00000557713 CFAP57Q96MR6 1250 aa16.26■□□□□ 0.19
SCFD1-224ENST00000557713 FCRL3Q96P31 734 aaPredicted RBP16.26■□□□□ 0.19
SCFD1-224ENST00000557713 TUBGCP2Q9BSJ2 902 aa16.26■□□□□ 0.19
SCFD1-224ENST00000557713 ATP13A1Q9HD20 1204 aa16.26■□□□□ 0.19
SCFD1-224ENST00000557713 PPARGC1AQ9UBK2 798 aaKnown RBP16.26■□□□□ 0.19
SCFD1-224ENST00000557713 FHOD1Q9Y613 1164 aa16.26■□□□□ 0.19
SCFD1-224ENST00000557713 BPTFQ12830 3046 aa16.26■□□□□ 0.19
SCFD1-224ENST00000557713 SPTY2D1-AS1A0A0U1RR47 76 aa16.25■□□□□ 0.19
SCFD1-224ENST00000557713 CXorf51AA0A1B0GTR3 108 aa16.25■□□□□ 0.19
SCFD1-224ENST00000557713 FAM170AA1A519 330 aa16.25■□□□□ 0.19
SCFD1-224ENST00000557713 GOLGA8SH3BPF8 625 aa16.25■□□□□ 0.19
SCFD1-224ENST00000557713 K7ESM1 405 aa16.25■□□□□ 0.19
SCFD1-224ENST00000557713 RAD51BO15315 384 aa16.25■□□□□ 0.19
SCFD1-224ENST00000557713 LSM8O95777 96 aaKnown RBP16.25■□□□□ 0.19
SCFD1-224ENST00000557713 CSF2P04141 144 aa16.25■□□□□ 0.19
SCFD1-224ENST00000557713 GP1BAP07359 652 aa16.25■□□□□ 0.19
SCFD1-224ENST00000557713 CCNHP51946 323 aaPredicted RBP16.25■□□□□ 0.19
SCFD1-224ENST00000557713 HNRNPKP61978 463 aaKnown RBP eCLIP16.25■□□□□ 0.19
SCFD1-224ENST00000557713 TLE3Q04726 772 aa16.25■□□□□ 0.19
SCFD1-224ENST00000557713 MAPK8IP2Q13387 824 aaPredicted RBP16.25■□□□□ 0.19
SCFD1-224ENST00000557713 RAPGEF1Q13905 1077 aa16.25■□□□□ 0.19
SCFD1-224ENST00000557713 KYAT3Q6YP21 454 aaKnown RBP16.25■□□□□ 0.19
SCFD1-224ENST00000557713 PARS2Q7L3T8 475 aaKnown RBP16.25■□□□□ 0.19
SCFD1-224ENST00000557713 NOP9Q86U38 636 aaKnown RBP16.25■□□□□ 0.19
SCFD1-224ENST00000557713 FAM131BQ86XD5 332 aa16.25■□□□□ 0.19
SCFD1-224ENST00000557713 FAM114A1Q8IWE2 563 aa16.25■□□□□ 0.19
SCFD1-224ENST00000557713 PLPP6Q8IY26 295 aa16.25■□□□□ 0.19
SCFD1-224ENST00000557713 SLC39A7Q92504 469 aa16.25■□□□□ 0.19
SCFD1-224ENST00000557713 VOPP1Q96AW1 172 aa16.25■□□□□ 0.19
SCFD1-224ENST00000557713 LENG8Q96PV6 779 aaPredicted RBP16.25■□□□□ 0.19
SCFD1-224ENST00000557713 KLF6Q99612 283 aaPredicted RBP16.25■□□□□ 0.19
SCFD1-224ENST00000557713 C1QTNF2Q9BXJ5 285 aa16.25■□□□□ 0.19
SCFD1-224ENST00000557713 USP29Q9HBJ7 922 aa16.25■□□□□ 0.19
SCFD1-224ENST00000557713 DNAJC28Q9NX36 388 aa16.25■□□□□ 0.19
SCFD1-224ENST00000557713 FCF1Q9Y324 198 aaKnown RBP16.25■□□□□ 0.19
SCFD1-224ENST00000557713 GTF3C3Q9Y5Q9 886 aa16.25■□□□□ 0.19
SCFD1-224ENST00000557713 ACTL7AQ9Y615 435 aa16.25■□□□□ 0.19
SCFD1-224ENST00000557713 DOCK4Q8N1I0 1966 aa16.24■□□□□ 0.19
SCFD1-224ENST00000557713 C1QL1O75973 258 aa16.24■□□□□ 0.19
SCFD1-224ENST00000557713 NEBLO76041 1014 aa16.24■□□□□ 0.19
SCFD1-224ENST00000557713 PRB1P04280 392 aa16.24■□□□□ 0.19
SCFD1-224ENST00000557713 PRKCSHP14314 528 aaPredicted RBP16.24■□□□□ 0.19
SCFD1-224ENST00000557713 DUSP3P51452 185 aaPredicted RBP16.24■□□□□ 0.19
SCFD1-224ENST00000557713 DNA2P51530 1060 aa16.24■□□□□ 0.19
SCFD1-224ENST00000557713 NOMO3P69849 1222 aa16.24■□□□□ 0.19
SCFD1-224ENST00000557713 CCDC173Q0VFZ6 552 aa16.24■□□□□ 0.19
SCFD1-224ENST00000557713 RAB6CQ53S08 254 aa16.24■□□□□ 0.19
SCFD1-224ENST00000557713 PTAR1Q7Z6K3 402 aaPredicted RBP16.24■□□□□ 0.19
SCFD1-224ENST00000557713 ZSCAN30Q86W11 494 aa16.24■□□□□ 0.19
SCFD1-224ENST00000557713 SPACA3Q8IXA5 215 aa16.24■□□□□ 0.19
SCFD1-224ENST00000557713 DRC7Q8IY82 874 aa16.24■□□□□ 0.19
SCFD1-224ENST00000557713 CPA5Q8WXQ8 436 aa16.24■□□□□ 0.19
SCFD1-224ENST00000557713 ISG20Q96AZ6 181 aaKnown RBP16.24■□□□□ 0.19
SCFD1-224ENST00000557713 DEPDC7Q96QD5 511 aa16.24■□□□□ 0.19
SCFD1-224ENST00000557713 DUSP23Q9BVJ7 150 aa16.24■□□□□ 0.19
SCFD1-224ENST00000557713 RAB6CQ9H0N0 254 aa16.24■□□□□ 0.19
SCFD1-224ENST00000557713 NDFIP2Q9NV92 336 aa16.24■□□□□ 0.19
SCFD1-224ENST00000557713 HECAQ9UBI9 543 aaPredicted RBP16.24■□□□□ 0.19
SCFD1-224ENST00000557713 KLF15Q9UIH9 416 aa16.24■□□□□ 0.19
SCFD1-224ENST00000557713 ASXL3Q9C0F0 2248 aa16.24■□□□□ 0.19
SCFD1-224ENST00000557713 C16orf96A6NNT2 1141 aa16.23■□□□□ 0.19
SCFD1-224ENST00000557713 TSPAN6O43657 245 aa16.23■□□□□ 0.19
SCFD1-224ENST00000557713 MMEP08473 750 aa16.23■□□□□ 0.19
SCFD1-224ENST00000557713 UCHL3P15374 230 aa16.23■□□□□ 0.19
SCFD1-224ENST00000557713 NME1P15531 152 aaKnown RBP16.23■□□□□ 0.19
SCFD1-224ENST00000557713 ADRA1BP35368 520 aa16.23■□□□□ 0.19
SCFD1-224ENST00000557713 ACVRL1P37023 503 aa16.23■□□□□ 0.19
SCFD1-224ENST00000557713 RABIFP47224 123 aa16.23■□□□□ 0.19
SCFD1-224ENST00000557713 NRG1Q02297 640 aaPredicted RBP16.23■□□□□ 0.19
SCFD1-224ENST00000557713 C19orf57Q0VDD7 668 aa16.23■□□□□ 0.19
SCFD1-224ENST00000557713 HSP90AA4PQ58FG1 418 aa16.23■□□□□ 0.19
SCFD1-224ENST00000557713 MANEALQ5VSG8 457 aa16.23■□□□□ 0.19
SCFD1-224ENST00000557713 GPR155Q7Z3F1 870 aa16.23■□□□□ 0.19
SCFD1-224ENST00000557713 EMC1Q8N766 993 aa16.23■□□□□ 0.19
SCFD1-224ENST00000557713 ZNF548Q8NEK5 533 aaPredicted RBP16.23■□□□□ 0.19
SCFD1-224ENST00000557713 ASB12Q8WXK4 309 aa16.23■□□□□ 0.19
SCFD1-224ENST00000557713 HIC2Q96JB3 615 aa16.23■□□□□ 0.19
SCFD1-224ENST00000557713 ZNF578Q96N58 590 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms