RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 PAGE1O75459 146 aa17.02■□□□□ 0.32
NEK9-211ENST00000557673 ENDOD1O94919 500 aa17.02■□□□□ 0.32
NEK9-211ENST00000557673 LCA5LO95447 670 aa17.02■□□□□ 0.32
NEK9-211ENST00000557673 WNT1P04628 370 aa17.02■□□□□ 0.32
NEK9-211ENST00000557673 H2AFZP0C0S5 128 aa17.02■□□□□ 0.32
NEK9-211ENST00000557673 TBC1D3HP0C7X1 549 aa17.02■□□□□ 0.32
NEK9-211ENST00000557673 EPHA8P29322 1005 aaPredicted RBP17.02■□□□□ 0.32
NEK9-211ENST00000557673 RXRGP48443 463 aa17.02■□□□□ 0.32
NEK9-211ENST00000557673 PSMD8P48556 350 aa17.02■□□□□ 0.32
NEK9-211ENST00000557673 CXCR3P49682 368 aa17.02■□□□□ 0.32
NEK9-211ENST00000557673 ACADVLP49748 655 aa17.02■□□□□ 0.32
NEK9-211ENST00000557673 ZNF143P52747 638 aaPredicted RBP17.02■□□□□ 0.32
NEK9-211ENST00000557673 ADPRHP54922 357 aa17.02■□□□□ 0.32
NEK9-211ENST00000557673 NXPH1P58417 271 aa17.02■□□□□ 0.32
NEK9-211ENST00000557673 ATP11AP98196 1134 aa17.02■□□□□ 0.32
NEK9-211ENST00000557673 SEMG2Q02383 582 aa17.02■□□□□ 0.32
NEK9-211ENST00000557673 DEUP1Q05D60 604 aa17.02■□□□□ 0.32
NEK9-211ENST00000557673 SULT2A1Q06520 285 aa17.02■□□□□ 0.32
NEK9-211ENST00000557673 SLC12A1Q13621 1099 aa17.02■□□□□ 0.32
NEK9-211ENST00000557673 AUHQ13825 339 aaKnown RBP17.02■□□□□ 0.32
NEK9-211ENST00000557673 CDO1Q16878 200 aa17.02■□□□□ 0.32
NEK9-211ENST00000557673 BRMS1LQ5PSV4 323 aa17.02■□□□□ 0.32
NEK9-211ENST00000557673 RABGAP1LQ5R372 815 aa17.02■□□□□ 0.32
NEK9-211ENST00000557673 TBC1D3GQ6DHY5 549 aa17.02■□□□□ 0.32
NEK9-211ENST00000557673 TBC1D3CQ6IPX1 549 aa17.02■□□□□ 0.32
NEK9-211ENST00000557673 H2AFVQ71UI9 128 aa17.02■□□□□ 0.32
NEK9-211ENST00000557673 STRADAQ7RTN6 431 aa17.02■□□□□ 0.32
NEK9-211ENST00000557673 IQCHQ86VS3 1027 aa17.02■□□□□ 0.32
NEK9-211ENST00000557673 TMTC1Q8IUR5 882 aa17.02■□□□□ 0.32
NEK9-211ENST00000557673 TBC1D3Q8IZP1 549 aaPredicted RBP17.02■□□□□ 0.32
NEK9-211ENST00000557673 APCDD1Q8J025 514 aa17.02■□□□□ 0.32
NEK9-211ENST00000557673 MFSD2AQ8NA29 543 aa17.02■□□□□ 0.32
NEK9-211ENST00000557673 PIP4K2CQ8TBX8 421 aa17.02■□□□□ 0.32
NEK9-211ENST00000557673 FNIP1Q8TF40 1166 aa17.02■□□□□ 0.32
NEK9-211ENST00000557673 CENPIQ92674 756 aaPredicted RBP17.02■□□□□ 0.32
NEK9-211ENST00000557673 RPRD1AQ96P16 312 aaPredicted RBP17.02■□□□□ 0.32
NEK9-211ENST00000557673 PPP1R9BQ96SB3 815 aa17.02■□□□□ 0.32
NEK9-211ENST00000557673 FAM129BQ96TA1 746 aa17.02■□□□□ 0.32
NEK9-211ENST00000557673 CNPY3Q9BT09 278 aa17.02■□□□□ 0.32
NEK9-211ENST00000557673 TRIM7Q9C029 511 aa17.02■□□□□ 0.32
NEK9-211ENST00000557673 MRPL47Q9HD33 250 aaKnown RBP17.02■□□□□ 0.32
NEK9-211ENST00000557673 VANGL2Q9ULK5 521 aa17.02■□□□□ 0.32
NEK9-211ENST00000557673 A0A1B0GVM2 712 aa17.01■□□□□ 0.31
NEK9-211ENST00000557673 TCAF2A6NFQ2 919 aa17.01■□□□□ 0.31
NEK9-211ENST00000557673 TMEM191CA6NGB0 347 aa17.01■□□□□ 0.31
NEK9-211ENST00000557673 I6L893 689 aaPredicted RBP17.01■□□□□ 0.31
NEK9-211ENST00000557673 ZIC2O95409 532 aaPredicted RBP17.01■□□□□ 0.31
NEK9-211ENST00000557673 F9P00740 461 aa17.01■□□□□ 0.31
NEK9-211ENST00000557673 IL1BP01584 269 aa17.01■□□□□ 0.31
NEK9-211ENST00000557673 TMEM253P0C7T8 217 aa17.01■□□□□ 0.31
NEK9-211ENST00000557673 CYLC1P35663 651 aaPredicted RBP17.01■□□□□ 0.31
NEK9-211ENST00000557673 EIF2S3P41091 472 aaKnown RBP17.01■□□□□ 0.31
NEK9-211ENST00000557673 OXCT1P55809 520 aa17.01■□□□□ 0.31
NEK9-211ENST00000557673 HDAC4P56524 1084 aa17.01■□□□□ 0.31
NEK9-211ENST00000557673 OVGP1Q12889 678 aa17.01■□□□□ 0.31
NEK9-211ENST00000557673 TARDBPQ13148 414 aaKnown RBP eCLIP17.01■□□□□ 0.31
NEK9-211ENST00000557673 DNAJC3Q13217 504 aa17.01■□□□□ 0.31
NEK9-211ENST00000557673 RTP5Q14D33 572 aa17.01■□□□□ 0.31
NEK9-211ENST00000557673 SHBQ15464 509 aa17.01■□□□□ 0.31
NEK9-211ENST00000557673 RAB6CQ53S08 254 aa17.01■□□□□ 0.31
NEK9-211ENST00000557673 HES3Q5TGS1 186 aa17.01■□□□□ 0.31
NEK9-211ENST00000557673 TTC39BQ5VTQ0 682 aaPredicted RBP17.01■□□□□ 0.31
NEK9-211ENST00000557673 NAPEPLDQ6IQ20 393 aa17.01■□□□□ 0.31
NEK9-211ENST00000557673 DSG4Q86SJ6 1040 aa17.01■□□□□ 0.31
NEK9-211ENST00000557673 C14orf80Q86SX3 495 aa17.01■□□□□ 0.31
NEK9-211ENST00000557673 PRPF39Q86UA1 669 aaKnown RBP17.01■□□□□ 0.31
NEK9-211ENST00000557673 CACTIN-AS1Q8N1I8 211 aa17.01■□□□□ 0.31
NEK9-211ENST00000557673 AADATQ8N5Z0 425 aa17.01■□□□□ 0.31
NEK9-211ENST00000557673 LSM14AQ8ND56 463 aaKnown RBP17.01■□□□□ 0.31
NEK9-211ENST00000557673 FAM172AQ8WUF8 416 aa17.01■□□□□ 0.31
NEK9-211ENST00000557673 CTNNBL1Q8WYA6 563 aaPredicted RBP17.01■□□□□ 0.31
NEK9-211ENST00000557673 TSC1Q92574 1164 aa17.01■□□□□ 0.31
NEK9-211ENST00000557673 BAG1Q99933 345 aaPredicted RBP17.01■□□□□ 0.31
NEK9-211ENST00000557673 NUP85Q9BW27 656 aa17.01■□□□□ 0.31
NEK9-211ENST00000557673 TKTL2Q9H0I9 626 aa17.01■□□□□ 0.31
NEK9-211ENST00000557673 SIK2Q9H0K1 926 aa17.01■□□□□ 0.31
NEK9-211ENST00000557673 RAB6CQ9H0N0 254 aa17.01■□□□□ 0.31
NEK9-211ENST00000557673 TMEM51Q9NW97 253 aa17.01■□□□□ 0.31
NEK9-211ENST00000557673 ARHGEF38Q9NXL2 777 aa17.01■□□□□ 0.31
NEK9-211ENST00000557673 SLCO3A1Q9UIG8 710 aa17.01■□□□□ 0.31
NEK9-211ENST00000557673 PAXBP1Q9Y5B6 917 aa17.01■□□□□ 0.31
NEK9-211ENST00000557673 SNX10Q9Y5X0 201 aa17.01■□□□□ 0.31
NEK9-211ENST00000557673 SETXQ7Z333 2677 aaKnown RBP17■□□□□ 0.31
NEK9-211ENST00000557673 C10orf142B7Z368 130 aa17■□□□□ 0.31
NEK9-211ENST00000557673 SLC7A4O43246 635 aa17■□□□□ 0.31
NEK9-211ENST00000557673 LATO43561 262 aa17■□□□□ 0.31
NEK9-211ENST00000557673 CKMT2P17540 419 aa17■□□□□ 0.31
NEK9-211ENST00000557673 MZF1P28698 734 aaPredicted RBP17■□□□□ 0.31
NEK9-211ENST00000557673 MTA1Q13330 715 aa17■□□□□ 0.31
NEK9-211ENST00000557673 FAM46CQ5VWP2 391 aa17■□□□□ 0.31
NEK9-211ENST00000557673 CXorf57Q6NSI4 855 aaKnown RBP17■□□□□ 0.31
NEK9-211ENST00000557673 FBXL19Q6PCT2 694 aa17■□□□□ 0.31
NEK9-211ENST00000557673 RAD9BQ6WBX8 426 aa17■□□□□ 0.31
NEK9-211ENST00000557673 FAM131BQ86XD5 332 aa17■□□□□ 0.31
NEK9-211ENST00000557673 STK40Q8N2I9 435 aa17■□□□□ 0.31
NEK9-211ENST00000557673 OR52K2Q8NGK3 314 aa17■□□□□ 0.31
NEK9-211ENST00000557673 PTPRN2Q92932 1015 aa17■□□□□ 0.31
NEK9-211ENST00000557673 CRELD1Q96HD1 420 aa17■□□□□ 0.31
NEK9-211ENST00000557673 WDCPQ9H6R7 721 aa17■□□□□ 0.31
NEK9-211ENST00000557673 TMPRSS4Q9NRS4 437 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms