RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 GUCY1A3Q02108 690 aa12.67□□□□□ -0.38
SHMT2-233ENST00000557529 MGAT5Q09328 741 aa12.67□□□□□ -0.38
SHMT2-233ENST00000557529 NIPAL4Q0D2K0 466 aa12.67□□□□□ -0.38
SHMT2-233ENST00000557529 OLIG2Q13516 323 aa12.67□□□□□ -0.38
SHMT2-233ENST00000557529 CDH18Q13634 790 aa12.67□□□□□ -0.38
SHMT2-233ENST00000557529 TEAD2Q15562 447 aa12.67□□□□□ -0.38
SHMT2-233ENST00000557529 RAB30Q15771 203 aa12.67□□□□□ -0.38
SHMT2-233ENST00000557529 PCID2Q5JVF3 399 aa12.67□□□□□ -0.38
SHMT2-233ENST00000557529 CERCAMQ5T4B2 595 aa12.67□□□□□ -0.38
SHMT2-233ENST00000557529 STXBP5Q5T5C0 1151 aa12.67□□□□□ -0.38
SHMT2-233ENST00000557529 ALG1LQ6GMV1 187 aa12.67□□□□□ -0.38
SHMT2-233ENST00000557529 RANBP10Q6VN20 620 aa12.67□□□□□ -0.38
SHMT2-233ENST00000557529 MARK2Q7KZI7 788 aaKnown RBP12.67□□□□□ -0.38
SHMT2-233ENST00000557529 TDRD5Q8NAT2 981 aaKnown RBP12.67□□□□□ -0.38
SHMT2-233ENST00000557529 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.67□□□□□ -0.38
SHMT2-233ENST00000557529 OR52K2Q8NGK3 314 aa12.67□□□□□ -0.38
SHMT2-233ENST00000557529 ARRDC2Q8TBH0 407 aa12.67□□□□□ -0.38
SHMT2-233ENST00000557529 SH3RF2Q8TEC5 729 aa12.67□□□□□ -0.38
SHMT2-233ENST00000557529 TADA1Q96BN2 335 aa12.67□□□□□ -0.38
SHMT2-233ENST00000557529 ALKBH8Q96BT7 664 aaKnown RBP12.67□□□□□ -0.38
SHMT2-233ENST00000557529 MRGPRX2Q96LB1 330 aa12.67□□□□□ -0.38
SHMT2-233ENST00000557529 PSKH2Q96QS6 385 aa12.67□□□□□ -0.38
SHMT2-233ENST00000557529 SMC6Q96SB8 1091 aa12.67□□□□□ -0.38
SHMT2-233ENST00000557529 APOL2Q9BQE5 337 aa12.67□□□□□ -0.38
SHMT2-233ENST00000557529 KIFC1Q9BW19 673 aa12.67□□□□□ -0.38
SHMT2-233ENST00000557529 CINPQ9BW66 212 aaPredicted RBP12.67□□□□□ -0.38
SHMT2-233ENST00000557529 ARNT2Q9HBZ2 717 aa12.67□□□□□ -0.38
SHMT2-233ENST00000557529 SSU72Q9NP77 194 aaKnown RBP12.67□□□□□ -0.38
SHMT2-233ENST00000557529 MSRAQ9UJ68 235 aa12.67□□□□□ -0.38
SHMT2-233ENST00000557529 SMG5Q9UPR3 1016 aaKnown RBP12.67□□□□□ -0.38
SHMT2-233ENST00000557529 FAM169AQ9Y6X4 670 aa12.67□□□□□ -0.38
SHMT2-233ENST00000557529 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.66□□□□□ -0.38
SHMT2-233ENST00000557529 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.66□□□□□ -0.38
SHMT2-233ENST00000557529 TMEM120BA0PK00 339 aa12.66□□□□□ -0.38
SHMT2-233ENST00000557529 CBX4O00257 560 aa12.66□□□□□ -0.38
SHMT2-233ENST00000557529 PER2O15055 1255 aa12.66□□□□□ -0.38
SHMT2-233ENST00000557529 ATP9BO43861 1147 aa12.66□□□□□ -0.38
SHMT2-233ENST00000557529 MOSPD3O75425 235 aa12.66□□□□□ -0.38
SHMT2-233ENST00000557529 KRT38O76015 456 aa12.66□□□□□ -0.38
SHMT2-233ENST00000557529 CYBBP04839 570 aa12.66□□□□□ -0.38
SHMT2-233ENST00000557529 MMP2P08253 660 aa12.66□□□□□ -0.38
SHMT2-233ENST00000557529 CHN1P15882 459 aa12.66□□□□□ -0.38
SHMT2-233ENST00000557529 CNTFP26441 200 aa12.66□□□□□ -0.38
SHMT2-233ENST00000557529 SLC18A1P54219 525 aa12.66□□□□□ -0.38
SHMT2-233ENST00000557529 MAXP61244 160 aa12.66□□□□□ -0.38
SHMT2-233ENST00000557529 DSC2Q02487 901 aa12.66□□□□□ -0.38
SHMT2-233ENST00000557529 ANKRD20A4Q4UJ75 823 aa12.66□□□□□ -0.38
SHMT2-233ENST00000557529 PRSS36Q5K4E3 855 aa12.66□□□□□ -0.38
SHMT2-233ENST00000557529 DENND5AQ6IQ26 1287 aa12.66□□□□□ -0.38
SHMT2-233ENST00000557529 TRMT10BQ6PF06 316 aaKnown RBP12.66□□□□□ -0.38
SHMT2-233ENST00000557529 MFN1Q8IWA4 741 aa12.66□□□□□ -0.38
SHMT2-233ENST00000557529 BBS7Q8IWZ6 715 aa12.66□□□□□ -0.38
SHMT2-233ENST00000557529 PGBD5Q8N414 524 aa12.66□□□□□ -0.38
SHMT2-233ENST00000557529 PPHLN1Q8NEY8 458 aaKnown RBP12.66□□□□□ -0.38
SHMT2-233ENST00000557529 DDI1Q8WTU0 396 aa12.66□□□□□ -0.38
SHMT2-233ENST00000557529 ZNF669Q96BR6 464 aaPredicted RBP12.66□□□□□ -0.38
SHMT2-233ENST00000557529 MTBPQ96DY7 904 aa12.66□□□□□ -0.38
SHMT2-233ENST00000557529 TCEAL4Q96EI5 215 aa12.66□□□□□ -0.38
SHMT2-233ENST00000557529 CERS2Q96G23 380 aa12.66□□□□□ -0.38
SHMT2-233ENST00000557529 SEMA3CQ99985 751 aa12.66□□□□□ -0.38
SHMT2-233ENST00000557529 MGME1Q9BQP7 344 aa12.66□□□□□ -0.38
SHMT2-233ENST00000557529 TLE6Q9H808 572 aa12.66□□□□□ -0.38
SHMT2-233ENST00000557529 MRM3Q9HC36 420 aaKnown RBP12.66□□□□□ -0.38
SHMT2-233ENST00000557529 KCNK9Q9NPC2 374 aa12.66□□□□□ -0.38
SHMT2-233ENST00000557529 NKIRAS1Q9NYS0 192 aa12.66□□□□□ -0.38
SHMT2-233ENST00000557529 VPS28Q9UK41 221 aa12.66□□□□□ -0.38
SHMT2-233ENST00000557529 HCFC2Q9Y5Z7 792 aa12.66□□□□□ -0.38
SHMT2-233ENST00000557529 DENND4CQ5VZ89 1909 aa12.65□□□□□ -0.38
SHMT2-233ENST00000557529 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.65□□□□□ -0.38
SHMT2-233ENST00000557529 CCDC195A0A1B0GUA6 201 aa12.65□□□□□ -0.38
SHMT2-233ENST00000557529 CXorf49A8MYA2 514 aaPredicted RBP12.65□□□□□ -0.38
SHMT2-233ENST00000557529 NRG2O14511 850 aaPredicted RBP12.65□□□□□ -0.38
SHMT2-233ENST00000557529 SCAMP3O14828 347 aaKnown RBP12.65□□□□□ -0.38
SHMT2-233ENST00000557529 PRPF4O43172 522 aaKnown RBP eCLIP12.65□□□□□ -0.381e-8■■■□□ 17.5
SHMT2-233ENST00000557529 EPOP01588 193 aa12.65□□□□□ -0.38
SHMT2-233ENST00000557529 MT-ND3P03897 115 aa12.65□□□□□ -0.38
SHMT2-233ENST00000557529 SERPINF2P08697 491 aa12.65□□□□□ -0.38
SHMT2-233ENST00000557529 SNRPAP09012 282 aaKnown RBP12.65□□□□□ -0.38
SHMT2-233ENST00000557529 TCF3P15923 654 aa12.65□□□□□ -0.38
SHMT2-233ENST00000557529 TPH1P17752 444 aa12.65□□□□□ -0.38
SHMT2-233ENST00000557529 ADRA1DP25100 572 aa12.65□□□□□ -0.38
SHMT2-233ENST00000557529 LSP1P33241 339 aa12.65□□□□□ -0.38
SHMT2-233ENST00000557529 PCSK7Q16549 785 aa12.65□□□□□ -0.38
SHMT2-233ENST00000557529 DUSP6Q16828 381 aa12.65□□□□□ -0.38
SHMT2-233ENST00000557529 RNF43Q68DV7 783 aa12.65□□□□□ -0.38
SHMT2-233ENST00000557529 PKN3Q6P5Z2 889 aa12.65□□□□□ -0.38
SHMT2-233ENST00000557529 LEKR1Q6ZMV7 388 aa12.65□□□□□ -0.38
SHMT2-233ENST00000557529 GRASPQ7Z6J2 395 aaPredicted RBP12.65□□□□□ -0.38
SHMT2-233ENST00000557529 DCAF4L2Q8NA75 395 aa12.65□□□□□ -0.38
SHMT2-233ENST00000557529 TTC16Q8NEE8 873 aa12.65□□□□□ -0.38
SHMT2-233ENST00000557529 MDM1Q8TC05 714 aa12.65□□□□□ -0.38
SHMT2-233ENST00000557529 MZB1Q8WU39 189 aa12.65□□□□□ -0.38
SHMT2-233ENST00000557529 ZNF707Q96C28 371 aaPredicted RBP12.65□□□□□ -0.38
SHMT2-233ENST00000557529 ABHD8Q96I13 439 aa12.65□□□□□ -0.38
SHMT2-233ENST00000557529 FEM1CQ96JP0 617 aa12.65□□□□□ -0.38
SHMT2-233ENST00000557529 TRIM56Q9BRZ2 755 aaKnown RBP12.65□□□□□ -0.38
SHMT2-233ENST00000557529 FEM1AQ9BSK4 669 aa12.65□□□□□ -0.38
SHMT2-233ENST00000557529 PIDD1Q9HB75 910 aa12.65□□□□□ -0.38
SHMT2-233ENST00000557529 PPANQ9NQ55 473 aaKnown RBP12.65□□□□□ -0.38
SHMT2-233ENST00000557529 SMYD2Q9NRG4 433 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms