RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.78□□□□□ -0.68
HNRNPC-232ENST00000557442 ADGRG1Q9Y653 693 aa10.78□□□□□ -0.68
HNRNPC-232ENST00000557442 A0A1W2PP55 124 aa10.77□□□□□ -0.69
HNRNPC-232ENST00000557442 GRID2IPA4D2P6 1211 aa10.77□□□□□ -0.69
HNRNPC-232ENST00000557442 KPNA3O00505 521 aaPredicted RBP10.77□□□□□ -0.69
HNRNPC-232ENST00000557442 ZNF821O75541 412 aaPredicted RBP10.77□□□□□ -0.69
HNRNPC-232ENST00000557442 RNASEH2AO75792 299 aaKnown RBP10.77□□□□□ -0.69
HNRNPC-232ENST00000557442 IGSF6O95976 241 aa10.77□□□□□ -0.69
HNRNPC-232ENST00000557442 GSRP00390 522 aa10.77□□□□□ -0.69
HNRNPC-232ENST00000557442 PRNPP04156 253 aa10.77□□□□□ -0.69
HNRNPC-232ENST00000557442 CTSLP07711 333 aa10.77□□□□□ -0.69
HNRNPC-232ENST00000557442 CCDC175P0C221 793 aa10.77□□□□□ -0.69
HNRNPC-232ENST00000557442 C7P10643 843 aa10.77□□□□□ -0.69
HNRNPC-232ENST00000557442 C5AR1P21730 350 aa10.77□□□□□ -0.69
HNRNPC-232ENST00000557442 CHRNA3P32297 505 aa10.77□□□□□ -0.69
HNRNPC-232ENST00000557442 MARCKSL1P49006 195 aa10.77□□□□□ -0.69
HNRNPC-232ENST00000557442 METAP1P53582 386 aa10.77□□□□□ -0.69
HNRNPC-232ENST00000557442 SNRPD1P62314 119 aaKnown RBP10.77□□□□□ -0.69
HNRNPC-232ENST00000557442 IL10RBQ08334 325 aa10.77□□□□□ -0.69
HNRNPC-232ENST00000557442 SFSWAPQ12872 951 aaKnown RBP10.77□□□□□ -0.69
HNRNPC-232ENST00000557442 CARD16Q5EG05 197 aa10.77□□□□□ -0.69
HNRNPC-232ENST00000557442 ATXN7L2Q5T6C5 722 aaPredicted RBP10.77□□□□□ -0.69
HNRNPC-232ENST00000557442 FAM46CQ5VWP2 391 aa10.77□□□□□ -0.69
HNRNPC-232ENST00000557442 DPY19L3Q6ZPD9 716 aa10.77□□□□□ -0.69
HNRNPC-232ENST00000557442 USP30Q70CQ3 517 aa10.77□□□□□ -0.69
HNRNPC-232ENST00000557442 AADATQ8N5Z0 425 aa10.77□□□□□ -0.69
HNRNPC-232ENST00000557442 DEFB119Q8N690 84 aa10.77□□□□□ -0.69
HNRNPC-232ENST00000557442 CHST14Q8NCH0 376 aa10.77□□□□□ -0.69
HNRNPC-232ENST00000557442 OR2AP1Q8NGE2 309 aa10.77□□□□□ -0.69
HNRNPC-232ENST00000557442 OR6K2Q8NGY2 324 aa10.77□□□□□ -0.69
HNRNPC-232ENST00000557442 KIAA1524Q8TCG1 905 aa10.77□□□□□ -0.69
HNRNPC-232ENST00000557442 ISG20Q96AZ6 181 aaKnown RBP10.77□□□□□ -0.69
HNRNPC-232ENST00000557442 RNF25Q96BH1 459 aaPredicted RBP10.77□□□□□ -0.69
HNRNPC-232ENST00000557442 EXOC2Q96KP1 924 aa10.77□□□□□ -0.69
HNRNPC-232ENST00000557442 GDAP1L1Q96MZ0 367 aa10.77□□□□□ -0.69
HNRNPC-232ENST00000557442 OMDQ99983 421 aa10.77□□□□□ -0.69
HNRNPC-232ENST00000557442 GPR174Q9BXC1 333 aa10.77□□□□□ -0.69
HNRNPC-232ENST00000557442 TSGA10Q9BZW7 698 aa10.77□□□□□ -0.69
HNRNPC-232ENST00000557442 WSB2Q9NYS7 404 aaPredicted RBP10.77□□□□□ -0.69
HNRNPC-232ENST00000557442 HECAQ9UBI9 543 aaPredicted RBP10.77□□□□□ -0.69
HNRNPC-232ENST00000557442 SERGEFQ9UGK8 458 aa10.77□□□□□ -0.69
HNRNPC-232ENST00000557442 IPO11Q9UI26 975 aaKnown RBP10.77□□□□□ -0.69
HNRNPC-232ENST00000557442 SARDHQ9UL12 918 aa10.77□□□□□ -0.69
HNRNPC-232ENST00000557442 NCKAP1Q9Y2A7 1128 aa10.77□□□□□ -0.69
HNRNPC-232ENST00000557442 PCDH15Q96QU1 1955 aa10.77□□□□□ -0.69
HNRNPC-232ENST00000557442 C3orf70A6NLC5 250 aaPredicted RBP10.76□□□□□ -0.69
HNRNPC-232ENST00000557442 ZNF487B1APH4 448 aa10.76□□□□□ -0.69
HNRNPC-232ENST00000557442 PLK4O00444 970 aa10.76□□□□□ -0.69
HNRNPC-232ENST00000557442 KRIT1O00522 736 aa10.76□□□□□ -0.69
HNRNPC-232ENST00000557442 LEFTY1O75610 366 aa10.76□□□□□ -0.69
HNRNPC-232ENST00000557442 PALMO75781 387 aa10.76□□□□□ -0.69
HNRNPC-232ENST00000557442 EPN2O95208 641 aa10.76□□□□□ -0.69
HNRNPC-232ENST00000557442 MAP3K6O95382 1288 aa10.76□□□□□ -0.69
HNRNPC-232ENST00000557442 SEMA4FO95754 770 aa10.76□□□□□ -0.69
HNRNPC-232ENST00000557442 PTMAP06454 111 aaKnown RBP10.76□□□□□ -0.69
HNRNPC-232ENST00000557442 ACSL1P33121 698 aa10.76□□□□□ -0.69
HNRNPC-232ENST00000557442 PTGER3P43115 390 aa10.76□□□□□ -0.69
HNRNPC-232ENST00000557442 CREB5Q02930 508 aa10.76□□□□□ -0.69
HNRNPC-232ENST00000557442 PAFAH1B3Q15102 231 aaKnown RBP10.76□□□□□ -0.69
HNRNPC-232ENST00000557442 INO80DQ53TQ3 878 aaPredicted RBP10.76□□□□□ -0.69
HNRNPC-232ENST00000557442 ARSIQ5FYB1 569 aa10.76□□□□□ -0.69
HNRNPC-232ENST00000557442 LYSMD4Q5XG99 296 aa10.76□□□□□ -0.69
HNRNPC-232ENST00000557442 CYP2U1Q7Z449 544 aa10.76□□□□□ -0.69
HNRNPC-232ENST00000557442 ALYREFQ86V81 257 aaKnown RBP10.76□□□□□ -0.69
HNRNPC-232ENST00000557442 VSIG1Q86XK7 387 aa10.76□□□□□ -0.69
HNRNPC-232ENST00000557442 RFX6Q8HWS3 928 aa10.76□□□□□ -0.69
HNRNPC-232ENST00000557442 CCDC50Q8IVM0 306 aa10.76□□□□□ -0.69
HNRNPC-232ENST00000557442 KATNAL2Q8IYT4 538 aa10.76□□□□□ -0.69
HNRNPC-232ENST00000557442 HDDC3Q8N4P3 179 aa10.76□□□□□ -0.69
HNRNPC-232ENST00000557442 PQLC3Q8N755 202 aa10.76□□□□□ -0.69
HNRNPC-232ENST00000557442 LRRC57Q8N9N7 239 aa10.76□□□□□ -0.69
HNRNPC-232ENST00000557442 RUBCNQ92622 972 aa10.76□□□□□ -0.69
HNRNPC-232ENST00000557442 KRT35Q92764 455 aa10.76□□□□□ -0.69
HNRNPC-232ENST00000557442 LOXL4Q96JB6 756 aa10.76□□□□□ -0.69
HNRNPC-232ENST00000557442 HSPA12BQ96MM6 686 aa10.76□□□□□ -0.69
HNRNPC-232ENST00000557442 ZNF830Q96NB3 372 aaPredicted RBP10.76□□□□□ -0.69
HNRNPC-232ENST00000557442 RNF157Q96PX1 679 aa10.76□□□□□ -0.69
HNRNPC-232ENST00000557442 HEPHQ9BQS7 1158 aa10.76□□□□□ -0.69
HNRNPC-232ENST00000557442 CINPQ9BW66 212 aaPredicted RBP10.76□□□□□ -0.69
HNRNPC-232ENST00000557442 MAK16Q9BXY0 300 aaKnown RBP10.76□□□□□ -0.69
HNRNPC-232ENST00000557442 BTBD1Q9H0C5 482 aa10.76□□□□□ -0.69
HNRNPC-232ENST00000557442 DYRK4Q9NR20 520 aa10.76□□□□□ -0.69
HNRNPC-232ENST00000557442 LHX3Q9UBR4 397 aa10.76□□□□□ -0.69
HNRNPC-232ENST00000557442 PPM1HQ9ULR3 514 aa10.76□□□□□ -0.69
HNRNPC-232ENST00000557442 FZD4Q9ULV1 537 aa10.76□□□□□ -0.69
HNRNPC-232ENST00000557442 CAPN6Q9Y6Q1 641 aa10.76□□□□□ -0.69
HNRNPC-232ENST00000557442 WASF2Q9Y6W5 498 aa10.76□□□□□ -0.69
HNRNPC-232ENST00000557442 TDRD6O60522 2096 aaKnown RBP10.76□□□□□ -0.69
HNRNPC-232ENST00000557442 KNL1Q8NG31 2342 aa10.75□□□□□ -0.69
HNRNPC-232ENST00000557442 SPTBN4Q9H254 2564 aa10.75□□□□□ -0.69
HNRNPC-232ENST00000557442 CEP250Q9BV73 2442 aa10.75□□□□□ -0.69
HNRNPC-232ENST00000557442 ATXN2Q99700 1313 aaKnown RBP10.75□□□□□ -0.69
HNRNPC-232ENST00000557442 FAM47DPA6NHR8 397 aa10.75□□□□□ -0.69
HNRNPC-232ENST00000557442 MEI4A8MW99 385 aa10.75□□□□□ -0.69
HNRNPC-232ENST00000557442 APOL1O14791 398 aa10.75□□□□□ -0.69
HNRNPC-232ENST00000557442 KRT86O43790 486 aa10.75□□□□□ -0.69
HNRNPC-232ENST00000557442 RETP07949 1114 aa10.75□□□□□ -0.69
HNRNPC-232ENST00000557442 GKP32189 559 aa10.75□□□□□ -0.69
HNRNPC-232ENST00000557442 CTNNA1P35221 906 aaKnown RBP10.75□□□□□ -0.69
HNRNPC-232ENST00000557442 DRD3P35462 400 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms