RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 TM6SF2Q9BZW4 377 aa12.71□□□□□ -0.37
SLIRP-209ENST00000557342 KLC2Q9H0B6 622 aa12.71□□□□□ -0.37
SLIRP-209ENST00000557342 C6orf106Q9H6K1 298 aaPredicted RBP12.71□□□□□ -0.37
SLIRP-209ENST00000557342 SP110Q9HB58 689 aa12.71□□□□□ -0.37
SLIRP-209ENST00000557342 TMEM74BQ9NUR3 256 aa12.71□□□□□ -0.37
SLIRP-209ENST00000557342 UBA2Q9UBT2 640 aaPredicted RBP12.71□□□□□ -0.37
SLIRP-209ENST00000557342 SERGEFQ9UGK8 458 aa12.71□□□□□ -0.37
SLIRP-209ENST00000557342 SLC6A14Q9UN76 642 aa12.71□□□□□ -0.37
SLIRP-209ENST00000557342 ACTL7AQ9Y615 435 aa12.71□□□□□ -0.37
SLIRP-209ENST00000557342 EPN1Q9Y6I3 576 aaPredicted RBP12.71□□□□□ -0.37
SLIRP-209ENST00000557342 PLXNA2O75051 1894 aa12.71□□□□□ -0.37
SLIRP-209ENST00000557342 PTPRZ1P23471 2315 aaPredicted RBP12.7□□□□□ -0.38
SLIRP-209ENST00000557342 A0A0A6YYK5 440 aaPredicted RBP12.7□□□□□ -0.38
SLIRP-209ENST00000557342 A0A1B0GTW7 788 aa12.7□□□□□ -0.38
SLIRP-209ENST00000557342 FAM47DPA6NHR8 397 aa12.7□□□□□ -0.38
SLIRP-209ENST00000557342 SOWAHDA6NJG2 315 aa12.7□□□□□ -0.38
SLIRP-209ENST00000557342 DFFAO00273 331 aa12.7□□□□□ -0.38
SLIRP-209ENST00000557342 PRAMEF11O60813 436 aa12.7□□□□□ -0.38
SLIRP-209ENST00000557342 TMCC1O94876 653 aa12.7□□□□□ -0.38
SLIRP-209ENST00000557342 FSBPO95073 299 aa12.7□□□□□ -0.38
SLIRP-209ENST00000557342 POP4O95707 220 aaKnown RBP12.7□□□□□ -0.38
SLIRP-209ENST00000557342 IGSF6O95976 241 aa12.7□□□□□ -0.38
SLIRP-209ENST00000557342 CTSLP07711 333 aa12.7□□□□□ -0.38
SLIRP-209ENST00000557342 SERPINF2P08697 491 aa12.7□□□□□ -0.38
SLIRP-209ENST00000557342 DRD3P35462 400 aa12.7□□□□□ -0.38
SLIRP-209ENST00000557342 GJC1P36383 396 aa12.7□□□□□ -0.38
SLIRP-209ENST00000557342 ARSEP51690 589 aa12.7□□□□□ -0.38
SLIRP-209ENST00000557342 LIMK1P53667 647 aa12.7□□□□□ -0.38
SLIRP-209ENST00000557342 ADPRHP54922 357 aa12.7□□□□□ -0.38
SLIRP-209ENST00000557342 HADHBP55084 474 aaKnown RBP12.7□□□□□ -0.38
SLIRP-209ENST00000557342 TAS2R40P59535 323 aa12.7□□□□□ -0.38
SLIRP-209ENST00000557342 RHOAP61586 193 aa12.7□□□□□ -0.38
SLIRP-209ENST00000557342 IL10RBQ08334 325 aa12.7□□□□□ -0.38
SLIRP-209ENST00000557342 RFTN1Q14699 578 aaPredicted RBP12.7□□□□□ -0.38
SLIRP-209ENST00000557342 KIAA0895LQ68EN5 471 aa12.7□□□□□ -0.38
SLIRP-209ENST00000557342 NCEH1Q6PIU2 408 aa12.7□□□□□ -0.38
SLIRP-209ENST00000557342 LEKR1Q6ZMV7 388 aa12.7□□□□□ -0.38
SLIRP-209ENST00000557342 ARHGAP12Q8IWW6 846 aa12.7□□□□□ -0.38
SLIRP-209ENST00000557342 SPC24Q8NBT2 197 aa12.7□□□□□ -0.38
SLIRP-209ENST00000557342 CHST14Q8NCH0 376 aa12.7□□□□□ -0.38
SLIRP-209ENST00000557342 GRIN3AQ8TCU5 1115 aa12.7□□□□□ -0.38
SLIRP-209ENST00000557342 SNX19Q92543 992 aa12.7□□□□□ -0.38
SLIRP-209ENST00000557342 GDAP1L1Q96MZ0 367 aa12.7□□□□□ -0.38
SLIRP-209ENST00000557342 BAG1Q99933 345 aaPredicted RBP12.7□□□□□ -0.38
SLIRP-209ENST00000557342 ZNF670Q9BS34 389 aa12.7□□□□□ -0.38
SLIRP-209ENST00000557342 CALN1Q9BXU9 219 aa12.7□□□□□ -0.38
SLIRP-209ENST00000557342 OSBPL1AQ9BXW6 950 aa12.7□□□□□ -0.38
SLIRP-209ENST00000557342 MIR1-1HGQ9H1L0 117 aa12.7□□□□□ -0.38
SLIRP-209ENST00000557342 SMOC1Q9H4F8 434 aa12.7□□□□□ -0.38
SLIRP-209ENST00000557342 ZDHHC6Q9H6R6 413 aa12.7□□□□□ -0.38
SLIRP-209ENST00000557342 PDFQ9HBH1 243 aa12.7□□□□□ -0.38
SLIRP-209ENST00000557342 CDV3Q9UKY7 258 aaKnown RBP12.7□□□□□ -0.38
SLIRP-209ENST00000557342 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.7□□□□□ -0.38
SLIRP-209ENST00000557342 WASF2Q9Y6W5 498 aa12.7□□□□□ -0.38
SLIRP-209ENST00000557342 GPR179Q6PRD1 2367 aa12.69□□□□□ -0.38
SLIRP-209ENST00000557342 TBC1D3DA0A087WVF3 549 aa12.69□□□□□ -0.38
SLIRP-209ENST00000557342 TBC1D3IA0A087WXS9 549 aa12.69□□□□□ -0.38
SLIRP-209ENST00000557342 TBC1D3EA0A087X179 549 aa12.69□□□□□ -0.38
SLIRP-209ENST00000557342 TBC1D3KA0A087X1G2 549 aa12.69□□□□□ -0.38
SLIRP-209ENST00000557342 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.69□□□□□ -0.38
SLIRP-209ENST00000557342 TBC1D3FA6NER0 549 aaPredicted RBP12.69□□□□□ -0.38
SLIRP-209ENST00000557342 PATE3B3GLJ2 98 aa12.69□□□□□ -0.38
SLIRP-209ENST00000557342 TBC1D3LB9A6J9 549 aa12.69□□□□□ -0.38
SLIRP-209ENST00000557342 BCAT2O15382 392 aaPredicted RBP12.69□□□□□ -0.38
SLIRP-209ENST00000557342 PLRG1O43660 514 aaKnown RBP12.69□□□□□ -0.38
SLIRP-209ENST00000557342 LEFTY1O75610 366 aa12.69□□□□□ -0.38
SLIRP-209ENST00000557342 CFIP05156 583 aa12.69□□□□□ -0.38
SLIRP-209ENST00000557342 SYPP08247 313 aa12.69□□□□□ -0.38
SLIRP-209ENST00000557342 TBC1D3HP0C7X1 549 aa12.69□□□□□ -0.38
SLIRP-209ENST00000557342 ITGB7P26010 798 aa12.69□□□□□ -0.38
SLIRP-209ENST00000557342 MAOBP27338 520 aa12.69□□□□□ -0.38
SLIRP-209ENST00000557342 CCR5P51681 352 aa12.69□□□□□ -0.38
SLIRP-209ENST00000557342 IRX4P78413 519 aa12.69□□□□□ -0.38
SLIRP-209ENST00000557342 CNTN1Q12860 1018 aa12.69□□□□□ -0.38
SLIRP-209ENST00000557342 DPYSL3Q14195 570 aa12.69□□□□□ -0.38
SLIRP-209ENST00000557342 MYLK3Q32MK0 819 aa12.69□□□□□ -0.38
SLIRP-209ENST00000557342 POM121L1PQ3SYA9 428 aa12.69□□□□□ -0.38
SLIRP-209ENST00000557342 ODF2Q5BJF6 829 aa12.69□□□□□ -0.38
SLIRP-209ENST00000557342 TMCO4Q5TGY1 634 aa12.69□□□□□ -0.38
SLIRP-209ENST00000557342 LRRC38Q5VT99 294 aa12.69□□□□□ -0.38
SLIRP-209ENST00000557342 AGBL4Q5VU57 503 aa12.69□□□□□ -0.38
SLIRP-209ENST00000557342 TBC1D3GQ6DHY5 549 aa12.69□□□□□ -0.38
SLIRP-209ENST00000557342 TBC1D3CQ6IPX1 549 aa12.69□□□□□ -0.38
SLIRP-209ENST00000557342 ERN2Q76MJ5 926 aaKnown RBP12.69□□□□□ -0.38
SLIRP-209ENST00000557342 LRRC49Q8IUZ0 686 aa12.69□□□□□ -0.38
SLIRP-209ENST00000557342 TBC1D3Q8IZP1 549 aaPredicted RBP12.69□□□□□ -0.38
SLIRP-209ENST00000557342 TXLNBQ8N3L3 684 aa12.69□□□□□ -0.38
SLIRP-209ENST00000557342 NPWQ8N729 165 aa12.69□□□□□ -0.38
SLIRP-209ENST00000557342 BIRC7Q96CA5 298 aa12.69□□□□□ -0.38
SLIRP-209ENST00000557342 EDEM2Q9BV94 578 aa12.69□□□□□ -0.38
SLIRP-209ENST00000557342 HDAC8Q9BY41 377 aa12.69□□□□□ -0.38
SLIRP-209ENST00000557342 EIF2B4Q9UI10 523 aaKnown RBP12.69□□□□□ -0.38
SLIRP-209ENST00000557342 IPO11Q9UI26 975 aaKnown RBP12.69□□□□□ -0.38
SLIRP-209ENST00000557342 EP300Q09472 2414 aaPredicted RBP12.69□□□□□ -0.38
SLIRP-209ENST00000557342 PCDH15Q96QU1 1955 aa12.69□□□□□ -0.38
SLIRP-209ENST00000557342 DOCK9Q9BZ29 2069 aa12.68□□□□□ -0.38
SLIRP-209ENST00000557342 GON4LQ3T8J9 2241 aa12.68□□□□□ -0.38
SLIRP-209ENST00000557342 LNP1A1A4G5 178 aa12.68□□□□□ -0.38
SLIRP-209ENST00000557342 ZNF487B1APH4 448 aa12.68□□□□□ -0.38
SLIRP-209ENST00000557342 J3KR12 359 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms