RNA–Protein interactions for RNA: ENST00000557159.5

APEX1-216, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 1,803 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-216ENST00000557159 DCLK2Q8N568 766 aa12.74□□□□□ -0.37
APEX1-216ENST00000557159 ZNF296Q8WUU4 475 aaPredicted RBP12.74□□□□□ -0.37
APEX1-216ENST00000557159 ATP6V1E2Q96A05 226 aa12.74□□□□□ -0.37
APEX1-216ENST00000557159 THAP11Q96EK4 314 aa12.74□□□□□ -0.37
APEX1-216ENST00000557159 ANKRD36BP1Q96IX9 119 aa12.74□□□□□ -0.37
APEX1-216ENST00000557159 PCYT2Q99447 389 aa12.74□□□□□ -0.37
APEX1-216ENST00000557159 OLFM1Q99784 485 aa12.74□□□□□ -0.37
APEX1-216ENST00000557159 NEURL2Q9BR09 285 aa12.74□□□□□ -0.37
APEX1-216ENST00000557159 MCMBPQ9BTE3 642 aa12.74□□□□□ -0.37
APEX1-216ENST00000557159 FTHL17Q9BXU8 183 aa12.74□□□□□ -0.37
APEX1-216ENST00000557159 MRPL4Q9BYD3 311 aaKnown RBP12.74□□□□□ -0.37
APEX1-216ENST00000557159 NMRAL1Q9HBL8 299 aa12.74□□□□□ -0.37
APEX1-216ENST00000557159 KIAA1522Q9P206 1035 aaPredicted RBP12.74□□□□□ -0.37
APEX1-216ENST00000557159 CD300AQ9UGN4 299 aa12.74□□□□□ -0.37
APEX1-216ENST00000557159 PCDHGA7Q9Y5G6 932 aa12.74□□□□□ -0.37
APEX1-216ENST00000557159 DNAJC25-GNG10A0A024R161 153 aa12.73□□□□□ -0.37
APEX1-216ENST00000557159 ASB14A6NK59 587 aa12.73□□□□□ -0.37
APEX1-216ENST00000557159 PIK3R2O00459 728 aa12.73□□□□□ -0.37
APEX1-216ENST00000557159 TIMM44O43615 452 aa12.73□□□□□ -0.37
APEX1-216ENST00000557159 MSCO60682 206 aa12.73□□□□□ -0.37
APEX1-216ENST00000557159 SULT1C4O75897 302 aa12.73□□□□□ -0.37
APEX1-216ENST00000557159 DGKIO75912 1065 aa12.73□□□□□ -0.37
APEX1-216ENST00000557159 EIF2S1P05198 315 aaKnown RBP12.73□□□□□ -0.37
APEX1-216ENST00000557159 CYP2F1P24903 491 aa12.73□□□□□ -0.37
APEX1-216ENST00000557159 GABRB3P28472 473 aa12.73□□□□□ -0.37
APEX1-216ENST00000557159 GRIA1P42261 906 aa12.73□□□□□ -0.37
APEX1-216ENST00000557159 SLC5A3P53794 718 aa12.73□□□□□ -0.37
APEX1-216ENST00000557159 NME5P56597 212 aa12.73□□□□□ -0.37
APEX1-216ENST00000557159 PSME3P61289 254 aa12.73□□□□□ -0.37
APEX1-216ENST00000557159 GALNT2Q10471 571 aa12.73□□□□□ -0.37
APEX1-216ENST00000557159 NRF1Q16656 503 aa12.73□□□□□ -0.37
APEX1-216ENST00000557159 CCDC14Q49A88 953 aa12.73□□□□□ -0.37
APEX1-216ENST00000557159 ZNF667Q5HYK9 610 aa12.73□□□□□ -0.37
APEX1-216ENST00000557159 ITPRIPL1Q6GPH6 555 aa12.73□□□□□ -0.37
APEX1-216ENST00000557159 CHSY3Q70JA7 882 aa12.73□□□□□ -0.37
APEX1-216ENST00000557159 EEPD1Q7L9B9 569 aa12.73□□□□□ -0.37
APEX1-216ENST00000557159 PLEKHH3Q7Z736 793 aa12.73□□□□□ -0.37
APEX1-216ENST00000557159 SLCO4A1Q96BD0 722 aa12.73□□□□□ -0.37
APEX1-216ENST00000557159 TMEM176AQ96HP8 235 aa12.73□□□□□ -0.37
APEX1-216ENST00000557159 PHF12Q96QT6 1004 aa12.73□□□□□ -0.37
APEX1-216ENST00000557159 SNRNP25Q9BV90 132 aaKnown RBP12.73□□□□□ -0.37
APEX1-216ENST00000557159 UNKQ9C0B0 810 aaKnown RBP12.73□□□□□ -0.37
APEX1-216ENST00000557159 ARHGAP39Q9C0H5 1083 aa12.73□□□□□ -0.37
APEX1-216ENST00000557159 ADAMTS10Q9H324 1103 aa12.73□□□□□ -0.37
APEX1-216ENST00000557159 SMARCAD1Q9H4L7 1026 aa12.73□□□□□ -0.37
APEX1-216ENST00000557159 EBF1Q9UH73 591 aa12.73□□□□□ -0.37
APEX1-216ENST00000557159 PACSIN3Q9UKS6 424 aa12.73□□□□□ -0.37
APEX1-216ENST00000557159 IGKV6-21A0A0C4DH24 114 aa12.72□□□□□ -0.37
APEX1-216ENST00000557159 HEATR9A2RTY3 570 aa12.72□□□□□ -0.37
APEX1-216ENST00000557159 TRPC5OSA6NMA1 111 aa12.72□□□□□ -0.37
APEX1-216ENST00000557159 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.72□□□□□ -0.37
APEX1-216ENST00000557159 H3BMQ9 156 aa12.72□□□□□ -0.37
APEX1-216ENST00000557159 CFLARO15519 480 aa12.72□□□□□ -0.37
APEX1-216ENST00000557159 FKTNO75072 461 aa12.72□□□□□ -0.37
APEX1-216ENST00000557159 COL6A2P12110 1019 aa12.72□□□□□ -0.37
APEX1-216ENST00000557159 ATICP31939 592 aa12.72□□□□□ -0.37
APEX1-216ENST00000557159 TNFSF9P41273 254 aa12.72□□□□□ -0.37
APEX1-216ENST00000557159 CTBSQ01459 385 aa12.72□□□□□ -0.37
APEX1-216ENST00000557159 GRB14Q14449 540 aa12.72□□□□□ -0.37
APEX1-216ENST00000557159 SH3PXD2AQ5TCZ1 1133 aa12.72□□□□□ -0.37
APEX1-216ENST00000557159 FAM45BPQ6NSW5 357 aa12.72□□□□□ -0.37
APEX1-216ENST00000557159 C8orf82Q6P1X6 216 aaPredicted RBP12.72□□□□□ -0.37
APEX1-216ENST00000557159 KCNT2Q6UVM3 1135 aa12.72□□□□□ -0.37
APEX1-216ENST00000557159 ISLR2Q6UXK2 745 aa12.72□□□□□ -0.37
APEX1-216ENST00000557159 LINC00299Q6ZSB3 139 aa12.72□□□□□ -0.37
APEX1-216ENST00000557159 ZBTB49Q6ZSB9 765 aa12.72□□□□□ -0.37
APEX1-216ENST00000557159 CCDC80Q76M96 950 aa12.72□□□□□ -0.37
APEX1-216ENST00000557159 ERMP1Q7Z2K6 904 aa12.72□□□□□ -0.37
APEX1-216ENST00000557159 CAMK1DQ8IU85 385 aa12.72□□□□□ -0.37
APEX1-216ENST00000557159 HERC6Q8IVU3 1022 aa12.72□□□□□ -0.37
APEX1-216ENST00000557159 PLD6Q8N2A8 252 aaKnown RBP12.72□□□□□ -0.37
APEX1-216ENST00000557159 PELI3Q8N2H9 469 aa12.72□□□□□ -0.37
APEX1-216ENST00000557159 CENPSQ8N2Z9 138 aa12.72□□□□□ -0.37
APEX1-216ENST00000557159 SCAIQ8N9R8 606 aa12.72□□□□□ -0.37
APEX1-216ENST00000557159 FAM45AQ8TCE6 357 aa12.72□□□□□ -0.37
APEX1-216ENST00000557159 HTR3CQ8WXA8 447 aa12.72□□□□□ -0.37
APEX1-216ENST00000557159 LRTOMTQ8WZ04 291 aa12.72□□□□□ -0.37
APEX1-216ENST00000557159 ZUFSPQ96AP4 578 aa12.72□□□□□ -0.37
APEX1-216ENST00000557159 COG8Q96MW5 612 aa12.72□□□□□ -0.37
APEX1-216ENST00000557159 TCF12Q99081 682 aa12.72□□□□□ -0.37
APEX1-216ENST00000557159 GPR20Q99678 358 aa12.72□□□□□ -0.37
APEX1-216ENST00000557159 SLC29A1Q99808 456 aa12.72□□□□□ -0.37
APEX1-216ENST00000557159 NPLQ9BXD5 320 aaPredicted RBP12.72□□□□□ -0.37
APEX1-216ENST00000557159 PAIP1Q9H074 479 aaKnown RBP12.72□□□□□ -0.37
APEX1-216ENST00000557159 WDR55Q9H6Y2 383 aaPredicted RBP12.72□□□□□ -0.37
APEX1-216ENST00000557159 CXorf21Q9HAI6 301 aa12.72□□□□□ -0.37
APEX1-216ENST00000557159 RCOR3Q9P2K3 495 aaPredicted RBP12.72□□□□□ -0.37
APEX1-216ENST00000557159 COPG1Q9Y678 874 aaKnown RBP12.72□□□□□ -0.37
APEX1-216ENST00000557159 A0A096LPK6 155 aa12.72□□□□□ -0.37
APEX1-216ENST00000557159 M0QYV0 167 aa12.72□□□□□ -0.37
APEX1-216ENST00000557159 TNPO2O14787 897 aaKnown RBP12.72□□□□□ -0.37
APEX1-216ENST00000557159 IL18RAPO95256 599 aa12.72□□□□□ -0.37
APEX1-216ENST00000557159 MPSTP25325 297 aa12.72□□□□□ -0.37
APEX1-216ENST00000557159 PTPN9P43378 593 aa12.72□□□□□ -0.37
APEX1-216ENST00000557159 POLD2P49005 469 aa12.72□□□□□ -0.37
APEX1-216ENST00000557159 FCGRTP55899 365 aa12.72□□□□□ -0.37
APEX1-216ENST00000557159 RPS3AP61247 264 aaKnown RBP12.72□□□□□ -0.37
APEX1-216ENST00000557159 MPP1Q00013 466 aa12.72□□□□□ -0.37
APEX1-216ENST00000557159 CAPSQ13938 189 aa12.72□□□□□ -0.37
APEX1-216ENST00000557159 LRP8Q14114 963 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms