RNA–Protein interactions for RNA: ENST00000557005.1

SYNE2-223, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,804 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-223ENST00000557005 ADAM17P78536 824 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 OGDHQ02218 1023 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 OLIG2Q13516 323 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 KCNJ11Q14654 390 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 SPDYE7PQ495Y7 208 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 ARHGAP17Q68EM7 881 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 STYK1Q6J9G0 422 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 TATDN1Q6P1N9 297 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 XRRA1Q6P2D8 792 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 OTOP3Q7RTS5 596 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 CAMK1DQ8IU85 385 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 BORCS6Q96GS4 357 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 LENG8Q96PV6 779 aaPredicted RBP5.04□□□□□ -1.6
SYNE2-223ENST00000557005 B3GNT5Q9BYG0 378 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 PCDHAC1Q9H158 963 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 TMEM216Q9P0N5 145 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 XPR1Q9UBH6 696 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 HMGXB4Q9UGU5 601 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 SNCAIPQ9Y6H5 919 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 ATRNL1Q5VV63 1379 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 A0A088AWK7 358 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 TYW5A2RUC4 315 aaKnown RBP5.04□□□□□ -1.6
SYNE2-223ENST00000557005 A6NHS1 94 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 PLA2G6O60733 806 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 SERPINI2O75830 405 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 MT-ND1P03886 318 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 ABCB1P08183 1280 aaPredicted RBP5.04□□□□□ -1.6
SYNE2-223ENST00000557005 CDH2P19022 906 aaPredicted RBP5.04□□□□□ -1.6
SYNE2-223ENST00000557005 BAG6P46379 1132 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 ACTR3P61158 418 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 TNK2Q07912 1038 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 SPIRE1Q08AE8 756 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 PFKFB4Q16877 469 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 MYLK3Q32MK0 819 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 MBLAC2Q68D91 279 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 TRMT10BQ6PF06 316 aaKnown RBP5.04□□□□□ -1.6
SYNE2-223ENST00000557005 DNAJC14Q6Y2X3 702 aaPredicted RBP5.04□□□□□ -1.6
SYNE2-223ENST00000557005 FASTKD5Q7L8L6 764 aaKnown RBP5.04□□□□□ -1.6
SYNE2-223ENST00000557005 TFAP2DQ7Z6R9 452 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 CUZD1Q86UP6 607 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 APOBEC3FQ8IUX4 373 aaKnown RBP5.04□□□□□ -1.6
SYNE2-223ENST00000557005 OR9Q1Q8NGQ5 310 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 SLCO2A1Q92959 643 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 EMID1Q96A84 441 aaPredicted RBP5.04□□□□□ -1.6
SYNE2-223ENST00000557005 SEPT5Q99719 369 aaPredicted RBP5.04□□□□□ -1.6
SYNE2-223ENST00000557005 SLC25A23Q9BV35 468 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 TKTL2Q9H0I9 626 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 ABCG8Q9H221 673 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 EPB41L1Q9H4G0 881 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 CYP3A43Q9HB55 503 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 PCDH12Q9NPG4 1184 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 TBC1D13Q9NVG8 400 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 ZNF358Q9NW07 568 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 LRFN2Q9ULH4 789 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 SNX10Q9Y5X0 201 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 TRPM3Q9HCF6 1732 aaPredicted RBP5.04□□□□□ -1.6
SYNE2-223ENST00000557005 MARF1Q9Y4F3 1742 aaKnown RBP5.04□□□□□ -1.6
SYNE2-223ENST00000557005 DHRS12A0PJE2 317 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 BOLA2-SMG1P6H3BVE0 249 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 IDH3BO43837 385 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 TYROBPO43914 113 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 NOBOXO60393 691 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 NRP2O60462 931 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 FOXD2O60548 495 aaPredicted RBP5.04□□□□□ -1.6
SYNE2-223ENST00000557005 CBFA2T3O75081 653 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 NMBRP28336 390 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 ALDH4A1P30038 563 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 MTHFRP42898 656 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 STT3AP46977 705 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 SPIDRQ14159 915 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 MAPRE1Q15691 268 aaKnown RBP5.04□□□□□ -1.6
SYNE2-223ENST00000557005 VPS72Q15906 364 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 VPS26BQ4G0F5 336 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 SYTL3Q4VX76 610 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 NOTUMQ6P988 496 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 IL27RAQ6UWB1 636 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 RALGPS2Q86X27 583 aaPredicted RBP5.04□□□□□ -1.6
SYNE2-223ENST00000557005 OR2T34Q8NGX1 318 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 OR2T3Q8NH03 318 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 RDH11Q8TC12 318 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 LPGAT1Q92604 370 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 RORBQ92753 470 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 TAMM41Q96BW9 452 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 NXNL1Q96CM4 212 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 NSMCE2Q96MF7 247 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 CCDC28BQ9BUN5 200 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 ROGDIQ9GZN7 287 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 TMEM134Q9H6X4 195 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 RMND5AQ9H871 391 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 PDGFCQ9NRA1 345 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 SETD4Q9NVD3 440 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 DMAC2Q9NW81 257 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 EHD3Q9NZN3 535 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 TELO2Q9Y4R8 837 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 MYPNQ86TC9 1320 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 COL14A1Q05707 1796 aaKnown RBP5.04□□□□□ -1.6
SYNE2-223ENST00000557005 BCORQ6W2J9 1755 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 PLIN4Q96Q06 1357 aa5.04□□□□□ -1.6
SYNE2-223ENST00000557005 A0A0J9YYE9 177 aa5.03□□□□□ -1.6
SYNE2-223ENST00000557005 YDJCA8MPS7 323 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms