RNA–Protein interactions for RNA: ENST00000556953.1

NGDN-212, Transcript of neuroguidin, humanhuman

TSL 2

Gene NGDN, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NGDN-212ENST00000556953 TBC1D3DA0A087WVF3 549 aa12.07□□□□□ -0.48
NGDN-212ENST00000556953 TBC1D3IA0A087WXS9 549 aa12.07□□□□□ -0.48
NGDN-212ENST00000556953 TBC1D3EA0A087X179 549 aa12.07□□□□□ -0.48
NGDN-212ENST00000556953 TBC1D3KA0A087X1G2 549 aa12.07□□□□□ -0.48
NGDN-212ENST00000556953 TBC1D3FA6NER0 549 aaPredicted RBP12.07□□□□□ -0.48
NGDN-212ENST00000556953 C10orf142B7Z368 130 aa12.07□□□□□ -0.48
NGDN-212ENST00000556953 TBC1D3LB9A6J9 549 aa12.07□□□□□ -0.48
NGDN-212ENST00000556953 AKR1B10O60218 316 aa12.07□□□□□ -0.48
NGDN-212ENST00000556953 LEFTY1O75610 366 aa12.07□□□□□ -0.48
NGDN-212ENST00000556953 CD160O95971 181 aa12.07□□□□□ -0.48
NGDN-212ENST00000556953 GSRP00390 522 aa12.07□□□□□ -0.48
NGDN-212ENST00000556953 H2AFZP0C0S5 128 aa12.07□□□□□ -0.48
NGDN-212ENST00000556953 TBC1D3HP0C7X1 549 aa12.07□□□□□ -0.48
NGDN-212ENST00000556953 NUDT1P36639 197 aa12.07□□□□□ -0.48
NGDN-212ENST00000556953 ARL4AP40617 200 aa12.07□□□□□ -0.48
NGDN-212ENST00000556953 CCNHP51946 323 aaPredicted RBP12.07□□□□□ -0.48
NGDN-212ENST00000556953 SNRPD1P62314 119 aaKnown RBP12.07□□□□□ -0.48
NGDN-212ENST00000556953 RACK1P63244 317 aaKnown RBP12.07□□□□□ -0.48
NGDN-212ENST00000556953 SERINC3Q13530 473 aa12.07□□□□□ -0.48
NGDN-212ENST00000556953 CACNA1EQ15878 2313 aa12.07□□□□□ -0.48
NGDN-212ENST00000556953 DPYSL2Q16555 572 aa12.07□□□□□ -0.48
NGDN-212ENST00000556953 ASTE1Q2TB18 679 aaPredicted RBP12.07□□□□□ -0.48
NGDN-212ENST00000556953 INO80DQ53TQ3 878 aaPredicted RBP12.07□□□□□ -0.48
NGDN-212ENST00000556953 PPP6R3Q5H9R7 873 aaPredicted RBP12.07□□□□□ -0.48
NGDN-212ENST00000556953 PPM1JQ5JR12 505 aa12.07□□□□□ -0.48
NGDN-212ENST00000556953 TBC1D3GQ6DHY5 549 aa12.07□□□□□ -0.48
NGDN-212ENST00000556953 TBC1D3CQ6IPX1 549 aa12.07□□□□□ -0.48
NGDN-212ENST00000556953 H2AFVQ71UI9 128 aa12.07□□□□□ -0.48
NGDN-212ENST00000556953 TBC1D3Q8IZP1 549 aaPredicted RBP12.07□□□□□ -0.48
NGDN-212ENST00000556953 OR2AP1Q8NGE2 309 aa12.07□□□□□ -0.48
NGDN-212ENST00000556953 ZNF564Q8TBZ8 553 aaPredicted RBP12.07□□□□□ -0.48
NGDN-212ENST00000556953 GRIN3AQ8TCU5 1115 aa12.07□□□□□ -0.48
NGDN-212ENST00000556953 TEKT4Q8WW24 435 aa12.07□□□□□ -0.48
NGDN-212ENST00000556953 SKA1Q96BD8 255 aa12.07□□□□□ -0.48
NGDN-212ENST00000556953 ARHGEF26Q96DR7 871 aa12.07□□□□□ -0.48
NGDN-212ENST00000556953 LRIG1Q96JA1 1093 aa12.07□□□□□ -0.48
NGDN-212ENST00000556953 CCDC42Q96M95 316 aa12.07□□□□□ -0.48
NGDN-212ENST00000556953 ORAI3Q9BRQ5 295 aa12.07□□□□□ -0.48
NGDN-212ENST00000556953 HDAC8Q9BY41 377 aa12.07□□□□□ -0.48
NGDN-212ENST00000556953 TM6SF2Q9BZW4 377 aa12.07□□□□□ -0.48
NGDN-212ENST00000556953 LRRC19Q9H756 370 aa12.07□□□□□ -0.48
NGDN-212ENST00000556953 PREBQ9HCU5 417 aa12.07□□□□□ -0.48
NGDN-212ENST00000556953 TM9SF3Q9HD45 589 aa12.07□□□□□ -0.48
NGDN-212ENST00000556953 HECAQ9UBI9 543 aaPredicted RBP12.07□□□□□ -0.48
NGDN-212ENST00000556953 LCMT1Q9UIC8 334 aa12.07□□□□□ -0.48
NGDN-212ENST00000556953 CACNA1AO00555 2505 aa12.06□□□□□ -0.48
NGDN-212ENST00000556953 ARHGAP42A6NI28 874 aa12.06□□□□□ -0.48
NGDN-212ENST00000556953 UPK3BL1B0FP48 263 aa12.06□□□□□ -0.48
NGDN-212ENST00000556953 AKR1B15C9JRZ8 316 aaPredicted RBP12.06□□□□□ -0.48
NGDN-212ENST00000556953 UPK3BL2E5RIL1 263 aa12.06□□□□□ -0.48
NGDN-212ENST00000556953 H3BRJ5 948 aa12.06□□□□□ -0.48
NGDN-212ENST00000556953 PLK4O00444 970 aa12.06□□□□□ -0.48
NGDN-212ENST00000556953 LATO43561 262 aa12.06□□□□□ -0.48
NGDN-212ENST00000556953 TMCC1O94876 653 aa12.06□□□□□ -0.48
NGDN-212ENST00000556953 CER1O95813 267 aa12.06□□□□□ -0.48
NGDN-212ENST00000556953 ERCC2P18074 760 aa12.06□□□□□ -0.48
NGDN-212ENST00000556953 CSRP1P21291 193 aaKnown RBP12.06□□□□□ -0.48
NGDN-212ENST00000556953 ITGB7P26010 798 aa12.06□□□□□ -0.48
NGDN-212ENST00000556953 IL1R2P27930 398 aa12.06□□□□□ -0.48
NGDN-212ENST00000556953 CSNK1EP49674 416 aaKnown RBP12.06□□□□□ -0.48
NGDN-212ENST00000556953 ADKP55263 362 aaKnown RBP12.06□□□□□ -0.48
NGDN-212ENST00000556953 RAD51Q06609 339 aa12.06□□□□□ -0.48
NGDN-212ENST00000556953 SLC14A1Q13336 389 aa12.06□□□□□ -0.48
NGDN-212ENST00000556953 HADHQ16836 314 aaKnown RBP12.06□□□□□ -0.48
NGDN-212ENST00000556953 SMTNL2Q2TAL5 461 aa12.06□□□□□ -0.48
NGDN-212ENST00000556953 KCNT1Q5JUK3 1230 aa12.06□□□□□ -0.48
NGDN-212ENST00000556953 PIP5KL1Q5T9C9 394 aa12.06□□□□□ -0.48
NGDN-212ENST00000556953 NEK5Q6P3R8 708 aa12.06□□□□□ -0.48
NGDN-212ENST00000556953 ERN2Q76MJ5 926 aaKnown RBP12.06□□□□□ -0.48
NGDN-212ENST00000556953 ADAT2Q7Z6V5 191 aaKnown RBP12.06□□□□□ -0.48
NGDN-212ENST00000556953 PRPF39Q86UA1 669 aaKnown RBP12.06□□□□□ -0.48
NGDN-212ENST00000556953 TRIM69Q86WT6 500 aa12.06□□□□□ -0.48
NGDN-212ENST00000556953 RYBPQ8N488 228 aaPredicted RBP12.06□□□□□ -0.48
NGDN-212ENST00000556953 LZTR1Q8N653 840 aa12.06□□□□□ -0.48
NGDN-212ENST00000556953 HSPH1Q92598 858 aa12.06□□□□□ -0.48
NGDN-212ENST00000556953 BTBD6Q96KE9 485 aa12.06□□□□□ -0.48
NGDN-212ENST00000556953 GDAP1L1Q96MZ0 367 aa12.06□□□□□ -0.48
NGDN-212ENST00000556953 ZDHHC6Q9H6R6 413 aa12.06□□□□□ -0.48
NGDN-212ENST00000556953 NHEJ1Q9H9Q4 299 aaPredicted RBP12.06□□□□□ -0.48
NGDN-212ENST00000556953 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.06□□□□□ -0.48
NGDN-212ENST00000556953 CWC15Q9P013 229 aaKnown RBP12.06□□□□□ -0.48
NGDN-212ENST00000556953 CTTNBP2NLQ9P2B4 639 aa12.06□□□□□ -0.48
NGDN-212ENST00000556953 DMTF1Q9Y222 760 aa12.06□□□□□ -0.48
NGDN-212ENST00000556953 ACTL7AQ9Y615 435 aa12.06□□□□□ -0.48
NGDN-212ENST00000556953 WASF2Q9Y6W5 498 aa12.06□□□□□ -0.48
NGDN-212ENST00000556953 KCNK5O95279 499 aa12.05□□□□□ -0.48
NGDN-212ENST00000556953 POP4O95707 220 aaKnown RBP12.05□□□□□ -0.48
NGDN-212ENST00000556953 TMEM253P0C7T8 217 aa12.05□□□□□ -0.48
NGDN-212ENST00000556953 RARAP10276 462 aa12.05□□□□□ -0.48
NGDN-212ENST00000556953 TCF4P15884 667 aa12.05□□□□□ -0.48
NGDN-212ENST00000556953 NEK3P51956 506 aa12.05□□□□□ -0.48
NGDN-212ENST00000556953 C21orf59P57076 290 aa12.05□□□□□ -0.48
NGDN-212ENST00000556953 SLC25A11Q02978 314 aaKnown RBP12.05□□□□□ -0.48
NGDN-212ENST00000556953 TBX2Q13207 712 aaPredicted RBP12.05□□□□□ -0.48
NGDN-212ENST00000556953 DPYSQ14117 519 aa12.05□□□□□ -0.48
NGDN-212ENST00000556953 MYLK3Q32MK0 819 aa12.05□□□□□ -0.48
NGDN-212ENST00000556953 SETMARQ53H47 684 aaPredicted RBP12.05□□□□□ -0.48
NGDN-212ENST00000556953 AFMIDQ63HM1 303 aa12.05□□□□□ -0.48
NGDN-212ENST00000556953 LEKR1Q6ZMV7 388 aa12.05□□□□□ -0.48
NGDN-212ENST00000556953 ARRDC3Q96B67 414 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms