RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 PRNPP04156 253 aa10.52□□□□□ -0.73
SHMT2-224ENST00000556737 ZBED6P86452 979 aa10.52□□□□□ -0.73
SHMT2-224ENST00000556737 SLC20A2Q08357 652 aa10.52□□□□□ -0.73
SHMT2-224ENST00000556737 TDRD12Q587J7 1177 aaKnown RBP10.52□□□□□ -0.73
SHMT2-224ENST00000556737 ARSIQ5FYB1 569 aa10.52□□□□□ -0.73
SHMT2-224ENST00000556737 NAPEPLDQ6IQ20 393 aa10.52□□□□□ -0.73
SHMT2-224ENST00000556737 LEKR1Q6ZMV7 388 aa10.52□□□□□ -0.73
SHMT2-224ENST00000556737 DBX2Q6ZNG2 339 aa10.52□□□□□ -0.73
SHMT2-224ENST00000556737 ISG20Q96AZ6 181 aaKnown RBP10.52□□□□□ -0.73
SHMT2-224ENST00000556737 HMCESQ96FZ2 354 aa10.52□□□□□ -0.73
SHMT2-224ENST00000556737 PDLIM2Q96JY6 352 aa10.52□□□□□ -0.73
SHMT2-224ENST00000556737 KCTD15Q96SI1 283 aaPredicted RBP10.52□□□□□ -0.73
SHMT2-224ENST00000556737 EPAS1Q99814 870 aa10.52□□□□□ -0.73
SHMT2-224ENST00000556737 HDAC8Q9BY41 377 aa10.52□□□□□ -0.73
SHMT2-224ENST00000556737 TM6SF2Q9BZW4 377 aa10.52□□□□□ -0.73
SHMT2-224ENST00000556737 SLC32A1Q9H598 525 aa10.52□□□□□ -0.73
SHMT2-224ENST00000556737 LRRC19Q9H756 370 aa10.52□□□□□ -0.73
SHMT2-224ENST00000556737 CAPN11Q9UMQ6 739 aa10.52□□□□□ -0.73
SHMT2-224ENST00000556737 AP4E1Q9UPM8 1137 aa10.52□□□□□ -0.73
SHMT2-224ENST00000556737 PCDHGB2Q9Y5G2 931 aa10.52□□□□□ -0.73
SHMT2-224ENST00000556737 SCINQ9Y6U3 715 aa10.52□□□□□ -0.73
SHMT2-224ENST00000556737 DOCK9Q9BZ29 2069 aa10.52□□□□□ -0.73
SHMT2-224ENST00000556737 ACACBO00763 2458 aa10.52□□□□□ -0.73
SHMT2-224ENST00000556737 KMT2BQ9UMN6 2715 aaPredicted RBP10.52□□□□□ -0.73
SHMT2-224ENST00000556737 AKAP13Q12802 2813 aa10.52□□□□□ -0.73
SHMT2-224ENST00000556737 TBC1D3DA0A087WVF3 549 aa10.51□□□□□ -0.73
SHMT2-224ENST00000556737 TBC1D3IA0A087WXS9 549 aa10.51□□□□□ -0.73
SHMT2-224ENST00000556737 TBC1D3EA0A087X179 549 aa10.51□□□□□ -0.73
SHMT2-224ENST00000556737 TBC1D3KA0A087X1G2 549 aa10.51□□□□□ -0.73
SHMT2-224ENST00000556737 TBC1D3FA6NER0 549 aaPredicted RBP10.51□□□□□ -0.73
SHMT2-224ENST00000556737 TBC1D3LB9A6J9 549 aa10.51□□□□□ -0.73
SHMT2-224ENST00000556737 KCNK3O14649 394 aa10.51□□□□□ -0.73
SHMT2-224ENST00000556737 FGF10O15520 208 aaPredicted RBP10.51□□□□□ -0.73
SHMT2-224ENST00000556737 SPINT1O43278 529 aa10.51□□□□□ -0.73
SHMT2-224ENST00000556737 KDELR3O43731 214 aa10.51□□□□□ -0.73
SHMT2-224ENST00000556737 NRDCO43847 1150 aa10.51□□□□□ -0.73
SHMT2-224ENST00000556737 GSRP00390 522 aa10.51□□□□□ -0.73
SHMT2-224ENST00000556737 TBC1D3HP0C7X1 549 aa10.51□□□□□ -0.73
SHMT2-224ENST00000556737 MYBL1P10243 752 aa10.51□□□□□ -0.73
SHMT2-224ENST00000556737 TCF4P15884 667 aa10.51□□□□□ -0.73
SHMT2-224ENST00000556737 ITGB7P26010 798 aa10.51□□□□□ -0.73
SHMT2-224ENST00000556737 MAT2AP31153 395 aaKnown RBP10.51□□□□□ -0.73
SHMT2-224ENST00000556737 GKP32189 559 aa10.51□□□□□ -0.73
SHMT2-224ENST00000556737 HTR7P34969 479 aa10.51□□□□□ -0.73
SHMT2-224ENST00000556737 GEMIN4P57678 1058 aaKnown RBP10.51□□□□□ -0.73
SHMT2-224ENST00000556737 GSDMDP57764 484 aa10.51□□□□□ -0.73
SHMT2-224ENST00000556737 SIM1P81133 766 aaPredicted RBP10.51□□□□□ -0.73
SHMT2-224ENST00000556737 FOXC1Q12948 553 aa10.51□□□□□ -0.73
SHMT2-224ENST00000556737 SERINC3Q13530 473 aa10.51□□□□□ -0.73
SHMT2-224ENST00000556737 TRIM14Q14142 442 aa10.51□□□□□ -0.73
SHMT2-224ENST00000556737 POLD3Q15054 466 aaPredicted RBP10.51□□□□□ -0.73
SHMT2-224ENST00000556737 SHBQ15464 509 aa10.51□□□□□ -0.73
SHMT2-224ENST00000556737 PARP15Q460N3 678 aa10.51□□□□□ -0.73
SHMT2-224ENST00000556737 CARD16Q5EG05 197 aa10.51□□□□□ -0.73
SHMT2-224ENST00000556737 TBC1D3GQ6DHY5 549 aa10.51□□□□□ -0.73
SHMT2-224ENST00000556737 TBC1D3CQ6IPX1 549 aa10.51□□□□□ -0.73
SHMT2-224ENST00000556737 ERN2Q76MJ5 926 aaKnown RBP10.51□□□□□ -0.73
SHMT2-224ENST00000556737 PARS2Q7L3T8 475 aaKnown RBP10.51□□□□□ -0.73
SHMT2-224ENST00000556737 PLPP6Q8IY26 295 aa10.51□□□□□ -0.73
SHMT2-224ENST00000556737 TBC1D3Q8IZP1 549 aaPredicted RBP10.51□□□□□ -0.73
SHMT2-224ENST00000556737 UMODL1-AS1Q8N2C9 162 aa10.51□□□□□ -0.73
SHMT2-224ENST00000556737 TMEM145Q8NBT3 493 aa10.51□□□□□ -0.73
SHMT2-224ENST00000556737 OR2AP1Q8NGE2 309 aa10.51□□□□□ -0.73
SHMT2-224ENST00000556737 OR6K2Q8NGY2 324 aa10.51□□□□□ -0.73
SHMT2-224ENST00000556737 IQCDQ96DY2 449 aa10.51□□□□□ -0.73
SHMT2-224ENST00000556737 TRIM11Q96F44 468 aa10.51□□□□□ -0.73
SHMT2-224ENST00000556737 SERAC1Q96JX3 654 aa10.51□□□□□ -0.73
SHMT2-224ENST00000556737 HEPHQ9BQS7 1158 aa10.51□□□□□ -0.73
SHMT2-224ENST00000556737 TMEM121BQ9BXQ6 578 aaPredicted RBP10.51□□□□□ -0.73
SHMT2-224ENST00000556737 THAP2Q9H0W7 228 aa10.51□□□□□ -0.73
SHMT2-224ENST00000556737 PDFQ9HBH1 243 aa10.51□□□□□ -0.73
SHMT2-224ENST00000556737 IMPACTQ9P2X3 320 aa10.51□□□□□ -0.73
SHMT2-224ENST00000556737 ZFR2Q9UPR6 939 aaKnown RBP10.51□□□□□ -0.73
SHMT2-224ENST00000556737 BTBD3Q9Y2F9 522 aa10.51□□□□□ -0.73
SHMT2-224ENST00000556737 USP24Q9UPU5 2620 aa10.51□□□□□ -0.73
SHMT2-224ENST00000556737 A0A087X0T9 212 aa10.5□□□□□ -0.73
SHMT2-224ENST00000556737 A0A1B0GTQ1 180 aa10.5□□□□□ -0.73
SHMT2-224ENST00000556737 PCNX2A6NKB5 2137 aa10.5□□□□□ -0.73
SHMT2-224ENST00000556737 EIF3CLB5ME19 914 aaKnown RBP10.5□□□□□ -0.73
SHMT2-224ENST00000556737 RASA4BC9J798 803 aa10.5□□□□□ -0.73
SHMT2-224ENST00000556737 FLRT2O43155 660 aa10.5□□□□□ -0.73
SHMT2-224ENST00000556737 RASA4O43374 803 aa10.5□□□□□ -0.73
SHMT2-224ENST00000556737 RNGTTO60942 597 aaKnown RBP10.5□□□□□ -0.73
SHMT2-224ENST00000556737 TMCC1O94876 653 aa10.5□□□□□ -0.73
SHMT2-224ENST00000556737 SERPING1P05155 500 aa10.5□□□□□ -0.73
SHMT2-224ENST00000556737 FAM228BP0C875 321 aa10.5□□□□□ -0.73
SHMT2-224ENST00000556737 ADRB3P13945 408 aa10.5□□□□□ -0.73
SHMT2-224ENST00000556737 SPINK2P20155 84 aa10.5□□□□□ -0.73
SHMT2-224ENST00000556737 IL1R2P27930 398 aa10.5□□□□□ -0.73
SHMT2-224ENST00000556737 CD38P28907 300 aa10.5□□□□□ -0.73
SHMT2-224ENST00000556737 MIPP30301 263 aa10.5□□□□□ -0.73
SHMT2-224ENST00000556737 HNRNPH3P31942 346 aaKnown RBP10.5□□□□□ -0.73
SHMT2-224ENST00000556737 NUDT1P36639 197 aa10.5□□□□□ -0.73
SHMT2-224ENST00000556737 ABL2P42684 1182 aa10.5□□□□□ -0.73
SHMT2-224ENST00000556737 RECQLP46063 649 aaPredicted RBP10.5□□□□□ -0.73
SHMT2-224ENST00000556737 CCT8P50990 548 aa10.5□□□□□ -0.73
SHMT2-224ENST00000556737 NEK3P51956 506 aa10.5□□□□□ -0.73
SHMT2-224ENST00000556737 C21orf59P57076 290 aa10.5□□□□□ -0.73
SHMT2-224ENST00000556737 NXPH1P58417 271 aa10.5□□□□□ -0.73
SHMT2-224ENST00000556737 YBEYP58557 167 aaPredicted RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms