RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 MANSC1Q9H8J5 431 aa18.58■□□□□ 0.56
SDR39U1-220ENST00000556548 AGO1Q9UL18 857 aaKnown RBP18.58■□□□□ 0.56
SDR39U1-220ENST00000556548 PCDHB12Q9Y5F1 795 aa18.58■□□□□ 0.56
SDR39U1-220ENST00000556548 GLDCP23378 1020 aa18.57■□□□□ 0.56
SDR39U1-220ENST00000556548 CNTFP26441 200 aa18.57■□□□□ 0.56
SDR39U1-220ENST00000556548 CCNFP41002 786 aa18.57■□□□□ 0.56
SDR39U1-220ENST00000556548 MAPKAPK2P49137 400 aa18.57■□□□□ 0.56
SDR39U1-220ENST00000556548 EPHB3P54753 998 aa18.57■□□□□ 0.56
SDR39U1-220ENST00000556548 SATB1Q01826 763 aa18.57■□□□□ 0.56
SDR39U1-220ENST00000556548 ITIH4Q14624 930 aa18.57■□□□□ 0.56
SDR39U1-220ENST00000556548 LBRQ14739 615 aaKnown RBP18.57■□□□□ 0.56
SDR39U1-220ENST00000556548 PCID2Q5JVF3 399 aa18.57■□□□□ 0.56
SDR39U1-220ENST00000556548 TXNDC8Q6A555 127 aa18.57■□□□□ 0.56
SDR39U1-220ENST00000556548 ESRP1Q6NXG1 681 aaKnown RBP18.57■□□□□ 0.56
SDR39U1-220ENST00000556548 KDELC1Q6UW63 502 aa18.57■□□□□ 0.56
SDR39U1-220ENST00000556548 RANBP10Q6VN20 620 aa18.57■□□□□ 0.56
SDR39U1-220ENST00000556548 CMC1Q7Z7K0 106 aa18.57■□□□□ 0.56
SDR39U1-220ENST00000556548 CPNE1Q99829 537 aa18.57■□□□□ 0.56
SDR39U1-220ENST00000556548 ZBED2Q9BTP6 218 aa18.57■□□□□ 0.56
SDR39U1-220ENST00000556548 KIFC1Q9BW19 673 aa18.57■□□□□ 0.56
SDR39U1-220ENST00000556548 ENTPD7Q9NQZ7 604 aa18.57■□□□□ 0.56
SDR39U1-220ENST00000556548 ABCF3Q9NUQ8 709 aa18.57■□□□□ 0.56
SDR39U1-220ENST00000556548 CCT8L1PA6NM43 557 aa18.57■□□□□ 0.56
SDR39U1-220ENST00000556548 EDF1O60869 148 aaKnown RBP18.57■□□□□ 0.56
SDR39U1-220ENST00000556548 MMP2P08253 660 aa18.57■□□□□ 0.56
SDR39U1-220ENST00000556548 CNPP09543 421 aaKnown RBP18.57■□□□□ 0.56
SDR39U1-220ENST00000556548 DHRS4L1P0CG22 281 aa18.57■□□□□ 0.56
SDR39U1-220ENST00000556548 HSPA8P11142 646 aaKnown RBP18.57■□□□□ 0.56
SDR39U1-220ENST00000556548 MBL2P11226 248 aaPredicted RBP18.57■□□□□ 0.56
SDR39U1-220ENST00000556548 SERPINB4P48594 390 aa18.57■□□□□ 0.56
SDR39U1-220ENST00000556548 LIG3P49916 1009 aa18.57■□□□□ 0.56
SDR39U1-220ENST00000556548 IL10RBQ08334 325 aa18.57■□□□□ 0.56
SDR39U1-220ENST00000556548 OVGP1Q12889 678 aa18.57■□□□□ 0.56
SDR39U1-220ENST00000556548 PDE1CQ14123 709 aaPredicted RBP18.57■□□□□ 0.56
SDR39U1-220ENST00000556548 PKN3Q6P5Z2 889 aa18.57■□□□□ 0.56
SDR39U1-220ENST00000556548 OTOAQ7RTW8 1153 aa18.57■□□□□ 0.56
SDR39U1-220ENST00000556548 VPS11Q9H270 941 aa18.57■□□□□ 0.56
SDR39U1-220ENST00000556548 CAB39LQ9H9S4 337 aa18.57■□□□□ 0.56
SDR39U1-220ENST00000556548 IL23AQ9NPF7 189 aa18.57■□□□□ 0.56
SDR39U1-220ENST00000556548 CXXC1Q9P0U4 656 aaPredicted RBP18.57■□□□□ 0.56
SDR39U1-220ENST00000556548 HSFX1Q9UBD0 423 aa18.57■□□□□ 0.56
SDR39U1-220ENST00000556548 CCDC195A0A1B0GUA6 201 aa18.56■□□□□ 0.56
SDR39U1-220ENST00000556548 MUSKO15146 869 aa18.56■□□□□ 0.56
SDR39U1-220ENST00000556548 EFCAB14O75071 495 aa18.56■□□□□ 0.56
SDR39U1-220ENST00000556548 MPP3Q13368 585 aa18.56■□□□□ 0.56
SDR39U1-220ENST00000556548 KLHDC10Q6PID8 442 aa18.56■□□□□ 0.56
SDR39U1-220ENST00000556548 TIFABQ6ZNK6 161 aa18.56■□□□□ 0.56
SDR39U1-220ENST00000556548 RGS9BPQ6ZS82 235 aa18.56■□□□□ 0.56
SDR39U1-220ENST00000556548 TCEAL8Q8IYN2 117 aa18.56■□□□□ 0.56
SDR39U1-220ENST00000556548 MICALL1Q8N3F8 863 aa18.56■□□□□ 0.56
SDR39U1-220ENST00000556548 DCLK2Q8N568 766 aa18.56■□□□□ 0.56
SDR39U1-220ENST00000556548 ARL14EPQ8N8R7 260 aaPredicted RBP18.56■□□□□ 0.56
SDR39U1-220ENST00000556548 PPHLN1Q8NEY8 458 aaKnown RBP18.56■□□□□ 0.56
SDR39U1-220ENST00000556548 BHMTQ93088 406 aa18.56■□□□□ 0.56
SDR39U1-220ENST00000556548 PLD4Q96BZ4 506 aa18.56■□□□□ 0.56
SDR39U1-220ENST00000556548 TRMT2BQ96GJ1 504 aaKnown RBP18.56■□□□□ 0.56
SDR39U1-220ENST00000556548 KLF16Q9BXK1 252 aaPredicted RBP18.56■□□□□ 0.56
SDR39U1-220ENST00000556548 AP3B1O00203 1094 aa18.56■□□□□ 0.56
SDR39U1-220ENST00000556548 TGM5O43548 720 aa18.56■□□□□ 0.56
SDR39U1-220ENST00000556548 VAPBO95292 243 aa18.56■□□□□ 0.56
SDR39U1-220ENST00000556548 PGGT1BP53609 377 aa18.56■□□□□ 0.56
SDR39U1-220ENST00000556548 YBEYP58557 167 aaPredicted RBP18.56■□□□□ 0.56
SDR39U1-220ENST00000556548 GNA12Q03113 381 aa18.56■□□□□ 0.56
SDR39U1-220ENST00000556548 NAB1Q13506 487 aa18.56■□□□□ 0.56
SDR39U1-220ENST00000556548 RABGAP1LQ5R372 815 aa18.56■□□□□ 0.56
SDR39U1-220ENST00000556548 GRTP1Q5TC63 336 aa18.56■□□□□ 0.56
SDR39U1-220ENST00000556548 FSTL4Q6MZW2 842 aa18.56■□□□□ 0.56
SDR39U1-220ENST00000556548 TEX26Q8N6G2 289 aa18.56■□□□□ 0.56
SDR39U1-220ENST00000556548 KLHL23Q8NBE8 558 aa18.56■□□□□ 0.56
SDR39U1-220ENST00000556548 ACVR1CQ8NER5 493 aa18.56■□□□□ 0.56
SDR39U1-220ENST00000556548 CCT6BQ92526 530 aa18.56■□□□□ 0.56
SDR39U1-220ENST00000556548 RBBP8Q99708 897 aa18.56■□□□□ 0.56
SDR39U1-220ENST00000556548 TMEM106CQ9BVX2 250 aa18.56■□□□□ 0.56
SDR39U1-220ENST00000556548 UXTQ9UBK9 157 aaPredicted RBP18.56■□□□□ 0.56
SDR39U1-220ENST00000556548 MTO1Q9Y2Z2 717 aaKnown RBP18.56■□□□□ 0.56
SDR39U1-220ENST00000556548 H3BNC9 293 aa18.55■□□□□ 0.56
SDR39U1-220ENST00000556548 PRAMEF11O60813 436 aa18.55■□□□□ 0.56
SDR39U1-220ENST00000556548 SAT1P21673 171 aa18.55■□□□□ 0.56
SDR39U1-220ENST00000556548 TYK2P29597 1187 aa18.55■□□□□ 0.56
SDR39U1-220ENST00000556548 CRHR1P34998 444 aa18.55■□□□□ 0.56
SDR39U1-220ENST00000556548 SMAD3P84022 425 aaKnown RBP18.55■□□□□ 0.56
SDR39U1-220ENST00000556548 CNGA3Q16281 694 aa18.55■□□□□ 0.56
SDR39U1-220ENST00000556548 ACBD5Q5T8D3 534 aaPredicted RBP18.55■□□□□ 0.56
SDR39U1-220ENST00000556548 YTHDF3Q7Z739 585 aaKnown RBP18.55■□□□□ 0.56
SDR39U1-220ENST00000556548 FIBCD1Q8N539 461 aa18.55■□□□□ 0.56
SDR39U1-220ENST00000556548 RMDN2Q96LZ7 410 aa18.55■□□□□ 0.56
SDR39U1-220ENST00000556548 SEMA3CQ99985 751 aa18.55■□□□□ 0.56
SDR39U1-220ENST00000556548 ARL2BPQ9Y2Y0 163 aa18.55■□□□□ 0.56
SDR39U1-220ENST00000556548 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.55■□□□□ 0.56
SDR39U1-220ENST00000556548 PPM1AP35813 382 aa18.55■□□□□ 0.56
SDR39U1-220ENST00000556548 CDH4P55283 916 aa18.55■□□□□ 0.56
SDR39U1-220ENST00000556548 ZXDBP98169 803 aa18.55■□□□□ 0.56
SDR39U1-220ENST00000556548 CYP4F8P98187 520 aa18.55■□□□□ 0.56
SDR39U1-220ENST00000556548 ZNF235Q14590 738 aa18.55■□□□□ 0.56
SDR39U1-220ENST00000556548 DLG2Q15700 870 aa18.55■□□□□ 0.56
SDR39U1-220ENST00000556548 TRPM8Q7Z2W7 1104 aa18.55■□□□□ 0.56
SDR39U1-220ENST00000556548 TMC7Q7Z402 723 aa18.55■□□□□ 0.56
SDR39U1-220ENST00000556548 RNF135Q8IUD6 432 aa18.55■□□□□ 0.56
SDR39U1-220ENST00000556548 ARRDC2Q8TBH0 407 aa18.55■□□□□ 0.56
SDR39U1-220ENST00000556548 BADQ92934 168 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms