RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 SYCP2LQ5T4T6 812 aa9.39□□□□□ -0.91
GTF2A1-204ENST00000556268 SHC4Q6S5L8 630 aa9.39□□□□□ -0.91
GTF2A1-204ENST00000556268 CPNE8Q86YQ8 564 aa9.39□□□□□ -0.91
GTF2A1-204ENST00000556268 TRIM59Q8IWR1 403 aa9.39□□□□□ -0.91
GTF2A1-204ENST00000556268 NELFCDQ8IXH7 590 aa9.39□□□□□ -0.91
GTF2A1-204ENST00000556268 CHPFQ8IZ52 775 aa9.39□□□□□ -0.91
GTF2A1-204ENST00000556268 C12orf29Q8N999 325 aa9.39□□□□□ -0.91
GTF2A1-204ENST00000556268 CADM4Q8NFZ8 388 aa9.39□□□□□ -0.91
GTF2A1-204ENST00000556268 SLC2A14Q8TDB8 520 aa9.39□□□□□ -0.91
GTF2A1-204ENST00000556268 MED10Q9BTT4 135 aa9.39□□□□□ -0.91
GTF2A1-204ENST00000556268 ZDHHC5Q9C0B5 715 aa9.39□□□□□ -0.91
GTF2A1-204ENST00000556268 DNAJC17Q9NVM6 304 aaKnown RBP9.39□□□□□ -0.91
GTF2A1-204ENST00000556268 WSB2Q9NYS7 404 aaPredicted RBP9.39□□□□□ -0.91
GTF2A1-204ENST00000556268 THAP10Q9P2Z0 257 aaPredicted RBP9.39□□□□□ -0.91
GTF2A1-204ENST00000556268 CNOT6Q9ULM6 557 aaKnown RBP9.39□□□□□ -0.91
GTF2A1-204ENST00000556268 KNTC1P50748 2209 aa9.38□□□□□ -0.91
GTF2A1-204ENST00000556268 LRRIQ3A6PVS8 624 aaPredicted RBP9.38□□□□□ -0.91
GTF2A1-204ENST00000556268 NEDD8-MDP1E9PL57 170 aa9.38□□□□□ -0.91
GTF2A1-204ENST00000556268 IKBKBO14920 756 aa9.38□□□□□ -0.91
GTF2A1-204ENST00000556268 NPC1O15118 1278 aa9.38□□□□□ -0.91
GTF2A1-204ENST00000556268 SUSD5O60279 629 aa9.38□□□□□ -0.91
GTF2A1-204ENST00000556268 CUTAO60888 179 aa9.38□□□□□ -0.91
GTF2A1-204ENST00000556268 ASS1P00966 412 aaKnown RBP9.38□□□□□ -0.91
GTF2A1-204ENST00000556268 PENKP01210 267 aaPredicted RBP9.38□□□□□ -0.91
GTF2A1-204ENST00000556268 KLKB1P03952 638 aa9.38□□□□□ -0.91
GTF2A1-204ENST00000556268 ZNF883P0CG24 379 aa9.38□□□□□ -0.91
GTF2A1-204ENST00000556268 ZSCAN22P10073 491 aaPredicted RBP9.38□□□□□ -0.91
GTF2A1-204ENST00000556268 PAMP19021 973 aa9.38□□□□□ -0.91
GTF2A1-204ENST00000556268 CD6P30203 668 aa9.38□□□□□ -0.91
GTF2A1-204ENST00000556268 KIF11P52732 1056 aa9.38□□□□□ -0.91
GTF2A1-204ENST00000556268 NDST1P52848 882 aa9.38□□□□□ -0.91
GTF2A1-204ENST00000556268 MAP3K7CLP57077 242 aa9.38□□□□□ -0.91
GTF2A1-204ENST00000556268 ACAP1Q15027 740 aa9.38□□□□□ -0.91
GTF2A1-204ENST00000556268 FXNQ16595 210 aa9.38□□□□□ -0.91
GTF2A1-204ENST00000556268 ZNF699Q32M78 642 aa9.38□□□□□ -0.91
GTF2A1-204ENST00000556268 ZACNQ401N2 412 aa9.38□□□□□ -0.91
GTF2A1-204ENST00000556268 WDR45BQ5MNZ6 344 aa9.38□□□□□ -0.91
GTF2A1-204ENST00000556268 GTF2IRD2BQ6EKJ0 949 aa9.38□□□□□ -0.91
GTF2A1-204ENST00000556268 TPGS1Q6ZTW0 290 aa9.38□□□□□ -0.91
GTF2A1-204ENST00000556268 SCD5Q86SK9 330 aa9.38□□□□□ -0.91
GTF2A1-204ENST00000556268 GTF2IRD2Q86UP8 949 aa9.38□□□□□ -0.91
GTF2A1-204ENST00000556268 GOLGA5Q8TBA6 731 aa9.38□□□□□ -0.91
GTF2A1-204ENST00000556268 TAF4BQ92750 862 aa9.38□□□□□ -0.91
GTF2A1-204ENST00000556268 MRGPRX3Q96LB0 322 aa9.38□□□□□ -0.91
GTF2A1-204ENST00000556268 MAGEF1Q9HAY2 307 aa9.38□□□□□ -0.91
GTF2A1-204ENST00000556268 NMUR1Q9HB89 426 aa9.38□□□□□ -0.91
GTF2A1-204ENST00000556268 PNPLA8Q9NP80 782 aa9.38□□□□□ -0.91
GTF2A1-204ENST00000556268 CD93Q9NPY3 652 aa9.38□□□□□ -0.91
GTF2A1-204ENST00000556268 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.38□□□□□ -0.91
GTF2A1-204ENST00000556268 USP36Q9P275 1121 aaKnown RBP9.38□□□□□ -0.91
GTF2A1-204ENST00000556268 CABIN1Q9Y6J0 2220 aa9.37□□□□□ -0.91
GTF2A1-204ENST00000556268 ITPR1Q14643 2758 aa9.37□□□□□ -0.91
GTF2A1-204ENST00000556268 CEP192Q8TEP8 1941 aa9.37□□□□□ -0.91
GTF2A1-204ENST00000556268 ADAMTS9Q9P2N4 1935 aa9.37□□□□□ -0.91
GTF2A1-204ENST00000556268 URB1O60287 2271 aaKnown RBP9.37□□□□□ -0.91
GTF2A1-204ENST00000556268 A0A1B0GTW7 788 aa9.37□□□□□ -0.91
GTF2A1-204ENST00000556268 KCNJ18B7U540 433 aa9.37□□□□□ -0.91
GTF2A1-204ENST00000556268 POLR2DO15514 142 aaKnown RBP9.37□□□□□ -0.91
GTF2A1-204ENST00000556268 TIMM44O43615 452 aa9.37□□□□□ -0.91
GTF2A1-204ENST00000556268 STX6O43752 255 aa9.37□□□□□ -0.91
GTF2A1-204ENST00000556268 KLRC4O43908 158 aa9.37□□□□□ -0.91
GTF2A1-204ENST00000556268 EXOC3O60645 756 aa9.37□□□□□ -0.91
GTF2A1-204ENST00000556268 NDUFS2O75306 463 aa9.37□□□□□ -0.91
GTF2A1-204ENST00000556268 STC2O76061 302 aa9.37□□□□□ -0.91
GTF2A1-204ENST00000556268 CYBBP04839 570 aa9.37□□□□□ -0.91
GTF2A1-204ENST00000556268 FTH1P19P0C7X4 201 aa9.37□□□□□ -0.91
GTF2A1-204ENST00000556268 RARGP13631 454 aa9.37□□□□□ -0.91
GTF2A1-204ENST00000556268 CCDC130P13994 396 aa9.37□□□□□ -0.91
GTF2A1-204ENST00000556268 GNSP15586 552 aa9.37□□□□□ -0.91
GTF2A1-204ENST00000556268 CASP1P29466 404 aa9.37□□□□□ -0.91
GTF2A1-204ENST00000556268 OXTRP30559 389 aa9.37□□□□□ -0.91
GTF2A1-204ENST00000556268 MAPKAPK2P49137 400 aa9.37□□□□□ -0.91
GTF2A1-204ENST00000556268 MFAP3P55082 362 aa9.37□□□□□ -0.91
GTF2A1-204ENST00000556268 BNC1Q01954 994 aa9.37□□□□□ -0.91
GTF2A1-204ENST00000556268 INCA1Q0VD86 236 aa9.37□□□□□ -0.91
GTF2A1-204ENST00000556268 STK4Q13043 487 aa9.37□□□□□ -0.91
GTF2A1-204ENST00000556268 NR1I3Q14994 352 aa9.37□□□□□ -0.91
GTF2A1-204ENST00000556268 STK38Q15208 465 aa9.37□□□□□ -0.91
GTF2A1-204ENST00000556268 PLEKHG6Q3KR16 790 aa9.37□□□□□ -0.91
GTF2A1-204ENST00000556268 FUT11Q495W5 492 aa9.37□□□□□ -0.91
GTF2A1-204ENST00000556268 C1orf220Q5T0J3 134 aa9.37□□□□□ -0.91
GTF2A1-204ENST00000556268 PAQR3Q6TCH7 311 aa9.37□□□□□ -0.91
GTF2A1-204ENST00000556268 CLEC20AQ6ZU45 233 aa9.37□□□□□ -0.91
GTF2A1-204ENST00000556268 GPRIN1Q7Z2K8 1008 aa9.37□□□□□ -0.91
GTF2A1-204ENST00000556268 TMPRSS6Q8IU80 811 aa9.37□□□□□ -0.91
GTF2A1-204ENST00000556268 HNRNPLLQ8WVV9 542 aaKnown RBP9.37□□□□□ -0.91
GTF2A1-204ENST00000556268 DHX58Q96C10 678 aa9.37□□□□□ -0.91
GTF2A1-204ENST00000556268 CYFIP2Q96F07 1278 aa9.37□□□□□ -0.91
GTF2A1-204ENST00000556268 TOE1Q96GM8 510 aaKnown RBP9.37□□□□□ -0.91
GTF2A1-204ENST00000556268 PIWIL1Q96J94 861 aaKnown RBP9.37□□□□□ -0.91
GTF2A1-204ENST00000556268 UBXN6Q9BZV1 441 aa9.37□□□□□ -0.91
GTF2A1-204ENST00000556268 NACA2Q9H009 215 aa9.37□□□□□ -0.91
GTF2A1-204ENST00000556268 KCTD10Q9H3F6 313 aa9.37□□□□□ -0.91
GTF2A1-204ENST00000556268 UPF2Q9HAU5 1272 aaKnown RBP9.37□□□□□ -0.91
GTF2A1-204ENST00000556268 PRDM16Q9HAZ2 1276 aa9.37□□□□□ -0.91
GTF2A1-204ENST00000556268 SLC39A2Q9NP94 309 aa9.37□□□□□ -0.91
GTF2A1-204ENST00000556268 CLIC5Q9NZA1 410 aa9.37□□□□□ -0.91
GTF2A1-204ENST00000556268 DKK4Q9UBT3 224 aa9.37□□□□□ -0.91
GTF2A1-204ENST00000556268 FBLN5Q9UBX5 448 aa9.37□□□□□ -0.91
GTF2A1-204ENST00000556268 ZNF510Q9Y2H8 683 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms