RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 BGNP21810 368 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 LPOP22079 712 aaPredicted RBP10.85□□□□□ -0.67
ACTN1-216ENST00000556083 TPP2P29144 1249 aaPredicted RBP10.85□□□□□ -0.67
ACTN1-216ENST00000556083 ANGPT1Q15389 498 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 SPANXN2Q5MJ10 180 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 ARMC4Q5T2S8 1044 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 IRGCQ6NXR0 463 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 SLC30A10Q6XR72 485 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 DEFB107AQ8IZN7 70 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 EPS8L1Q8TE68 723 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 RNF157Q96PX1 679 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 CCDC28BQ9BUN5 200 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 DHX33Q9H6R0 707 aaKnown RBP10.85□□□□□ -0.67
ACTN1-216ENST00000556083 C3orf14Q9HBI5 128 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 OSGEPQ9NPF4 335 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 BLOC1S4Q9NUP1 217 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 PNMA8BQ9ULN7 279 aaPredicted RBP10.85□□□□□ -0.67
ACTN1-216ENST00000556083 POLR1DQ9Y2S0 133 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 MEGF6O75095 1541 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 KDM4FA0A1W2PPD8 638 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 FKTNO75072 461 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 COX7A2P14406 83 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 MGAT1P26572 445 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 IL5RAQ01344 420 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 SP3Q02447 781 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 ELP6Q0PNE2 266 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 ZACNQ401N2 412 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 SLC39A12Q504Y0 691 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 LEMD2Q8NC56 503 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 RP9Q8TA86 221 aaKnown RBP10.85□□□□□ -0.67
ACTN1-216ENST00000556083 TCP10LQ8TDR4 215 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 CYP4F12Q9HCS2 524 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 IL17RBQ9NRM6 502 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 HAO1Q9UJM8 370 aa10.85□□□□□ -0.67
ACTN1-216ENST00000556083 MTF2Q9Y483 593 aaPredicted RBP10.85□□□□□ -0.67
ACTN1-216ENST00000556083 FAM20BO75063 409 aa10.84□□□□□ -0.67
ACTN1-216ENST00000556083 TGDSO95455 350 aa10.84□□□□□ -0.67
ACTN1-216ENST00000556083 RARAP10276 462 aa10.84□□□□□ -0.67
ACTN1-216ENST00000556083 S100GP29377 79 aa10.84□□□□□ -0.67
ACTN1-216ENST00000556083 TGFBR2P37173 567 aa10.84□□□□□ -0.67
ACTN1-216ENST00000556083 MATKP42679 507 aa10.84□□□□□ -0.67
ACTN1-216ENST00000556083 LY6KQ17RY6 165 aa10.84□□□□□ -0.67
ACTN1-216ENST00000556083 PRAMEF18Q5VWM3 479 aa10.84□□□□□ -0.67
ACTN1-216ENST00000556083 SAMD14Q8IZD0 417 aaPredicted RBP10.84□□□□□ -0.67
ACTN1-216ENST00000556083 CERS2Q96G23 380 aa10.84□□□□□ -0.67
ACTN1-216ENST00000556083 DUSP9Q99956 384 aaKnown RBP10.84□□□□□ -0.67
ACTN1-216ENST00000556083 OMDQ99983 421 aa10.84□□□□□ -0.67
ACTN1-216ENST00000556083 KIAA1522Q9P206 1035 aaPredicted RBP10.84□□□□□ -0.67
ACTN1-216ENST00000556083 PDE5AO76074 875 aa10.84□□□□□ -0.67
ACTN1-216ENST00000556083 NUDT17P0C025 328 aa10.84□□□□□ -0.67
ACTN1-216ENST00000556083 USP17L7P0C7H9 530 aa10.84□□□□□ -0.67
ACTN1-216ENST00000556083 AMPD1P23109 780 aa10.84□□□□□ -0.67
ACTN1-216ENST00000556083 ADSLP30566 484 aaPredicted RBP10.84□□□□□ -0.67
ACTN1-216ENST00000556083 GLRBP48167 497 aa10.84□□□□□ -0.67
ACTN1-216ENST00000556083 SLC20A2Q08357 652 aa10.84□□□□□ -0.67
ACTN1-216ENST00000556083 PARP15Q460N3 678 aa10.84□□□□□ -0.67
ACTN1-216ENST00000556083 ERICH5Q6P6B1 374 aa10.84□□□□□ -0.67
ACTN1-216ENST00000556083 ZNF549Q6P9A3 640 aa10.84□□□□□ -0.67
ACTN1-216ENST00000556083 PEX5LQ8IYB4 626 aa10.84□□□□□ -0.67
ACTN1-216ENST00000556083 MYDGFQ969H8 173 aa10.84□□□□□ -0.67
ACTN1-216ENST00000556083 TLR10Q9BXR5 811 aa10.84□□□□□ -0.67
ACTN1-216ENST00000556083 RAP2CQ9Y3L5 183 aa10.84□□□□□ -0.67
ACTN1-216ENST00000556083 STON1Q9Y6Q2 735 aa10.84□□□□□ -0.67
ACTN1-216ENST00000556083 AVILO75366 819 aa10.84□□□□□ -0.67
ACTN1-216ENST00000556083 MFN2O95140 757 aa10.84□□□□□ -0.67
ACTN1-216ENST00000556083 ZNF286BP0CG31 522 aa10.84□□□□□ -0.67
ACTN1-216ENST00000556083 HNRNPH1P31943 449 aaKnown RBP10.84□□□□□ -0.67
ACTN1-216ENST00000556083 PRKG2Q13237 762 aa10.84□□□□□ -0.67
ACTN1-216ENST00000556083 TUSC3Q13454 348 aa10.84□□□□□ -0.67
ACTN1-216ENST00000556083 PDZK1Q5T2W1 519 aa10.84□□□□□ -0.67
ACTN1-216ENST00000556083 ZFPM1Q8IX07 1006 aa10.84□□□□□ -0.67
ACTN1-216ENST00000556083 SELENOMQ8WWX9 145 aa10.84□□□□□ -0.67
ACTN1-216ENST00000556083 OR8D1Q8WZ84 308 aa10.84□□□□□ -0.67
ACTN1-216ENST00000556083 CXorf40BQ96DE9 158 aa10.84□□□□□ -0.67
ACTN1-216ENST00000556083 TEKT5Q96M29 485 aa10.84□□□□□ -0.67
ACTN1-216ENST00000556083 ZNF607Q96SK3 696 aa10.84□□□□□ -0.67
ACTN1-216ENST00000556083 CDHR5Q9HBB8 845 aa10.84□□□□□ -0.67
ACTN1-216ENST00000556083 INVSQ9Y283 1065 aa10.84□□□□□ -0.67
ACTN1-216ENST00000556083 PREX1Q8TCU6 1659 aa10.84□□□□□ -0.67
ACTN1-216ENST00000556083 NDUFS2O75306 463 aa10.84□□□□□ -0.67
ACTN1-216ENST00000556083 ULK1O75385 1050 aa10.84□□□□□ -0.67
ACTN1-216ENST00000556083 NFICP08651 508 aa10.84□□□□□ -0.67
ACTN1-216ENST00000556083 ERCC2P18074 760 aa10.84□□□□□ -0.67
ACTN1-216ENST00000556083 POU1F1P28069 291 aa10.84□□□□□ -0.67
ACTN1-216ENST00000556083 BNC1Q01954 994 aa10.84□□□□□ -0.67
ACTN1-216ENST00000556083 BOP1Q14137 746 aaKnown RBP10.84□□□□□ -0.67
ACTN1-216ENST00000556083 RNF43Q68DV7 783 aa10.84□□□□□ -0.67
ACTN1-216ENST00000556083 MZT2BQ6NZ67 158 aa10.84□□□□□ -0.67
ACTN1-216ENST00000556083 AAGABQ6PD74 315 aa10.84□□□□□ -0.67
ACTN1-216ENST00000556083 FAM220AQ7Z4H9 259 aa10.84□□□□□ -0.67
ACTN1-216ENST00000556083 DNAJB7Q7Z6W7 309 aaPredicted RBP10.84□□□□□ -0.67
ACTN1-216ENST00000556083 AMER2Q8N7J2 671 aa10.84□□□□□ -0.67
ACTN1-216ENST00000556083 AENQ8WTP8 325 aaKnown RBP10.84□□□□□ -0.67
ACTN1-216ENST00000556083 FAM118BQ9BPY3 351 aa10.84□□□□□ -0.67
ACTN1-216ENST00000556083 MBD2Q9UBB5 411 aa10.84□□□□□ -0.67
ACTN1-216ENST00000556083 FBXL21Q9UKT6 434 aa10.84□□□□□ -0.67
ACTN1-216ENST00000556083 NCF1BA6NI72 391 aaPredicted RBP10.83□□□□□ -0.68
ACTN1-216ENST00000556083 NCF1CA8MVU1 366 aaPredicted RBP10.83□□□□□ -0.68
ACTN1-216ENST00000556083 E5RJQ4 531 aa10.83□□□□□ -0.68
ACTN1-216ENST00000556083 TPST1O60507 370 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms