RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 ADSLP30566 484 aaPredicted RBP7.11□□□□□ -1.27
TDP1-213ENST00000555880 CD68P34810 354 aaPredicted RBP7.11□□□□□ -1.27
TDP1-213ENST00000555880 PPARGP37231 505 aaPredicted RBP7.11□□□□□ -1.27
TDP1-213ENST00000555880 ABCG1P45844 678 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 GRIA4P48058 902 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 POLD2P49005 469 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 CPT1AP50416 773 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 ZBTB17Q13105 803 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 CYLC2Q14093 348 aaPredicted RBP7.11□□□□□ -1.27
TDP1-213ENST00000555880 GRM3Q14832 879 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 DLG2Q15700 870 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 LRRC36Q1X8D7 754 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 GRAMD1BQ3KR37 738 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 PUS10Q3MIT2 529 aaKnown RBP7.11□□□□□ -1.27
TDP1-213ENST00000555880 MMEL1Q495T6 779 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 NXNQ6DKJ4 435 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 DCLRE1AQ6PJP8 1040 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 BNC2Q6ZN30 1099 aaPredicted RBP7.11□□□□□ -1.27
TDP1-213ENST00000555880 MFN1Q8IWA4 741 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 TP53INP2Q8IXH6 220 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 ATPAF2Q8N5M1 289 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 NPWQ8N729 165 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 SMG8Q8ND04 991 aaKnown RBP7.11□□□□□ -1.27
TDP1-213ENST00000555880 CATSPER1Q8NEC5 780 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 PPHLN1Q8NEY8 458 aaKnown RBP7.11□□□□□ -1.27
TDP1-213ENST00000555880 RP9Q8TA86 221 aaKnown RBP7.11□□□□□ -1.27
TDP1-213ENST00000555880 GABPB2Q8TAK5 448 aaPredicted RBP7.11□□□□□ -1.27
TDP1-213ENST00000555880 TMEM40Q8WWA1 233 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 STON2Q8WXE9 905 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 IFT43Q96FT9 208 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 SMARCD1Q96GM5 515 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 SENP8Q96LD8 212 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 PPP1R10Q96QC0 940 aaKnown RBP7.11□□□□□ -1.27
TDP1-213ENST00000555880 APBA2Q99767 749 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 GATA5Q9BWX5 397 aaPredicted RBP7.11□□□□□ -1.27
TDP1-213ENST00000555880 OXCT2Q9BYC2 517 aaPredicted RBP7.11□□□□□ -1.27
TDP1-213ENST00000555880 UBE2OQ9C0C9 1292 aaKnown RBP7.11□□□□□ -1.27
TDP1-213ENST00000555880 TKTL2Q9H0I9 626 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 EBF3Q9H4W6 596 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 MRGBPQ9NV56 204 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 C6orf203Q9P0P8 240 aaPredicted RBP7.11□□□□□ -1.27
TDP1-213ENST00000555880 STK39Q9UEW8 545 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 ACOT9Q9Y305 439 aa7.11□□□□□ -1.27
TDP1-213ENST00000555880 C17orf102A2RUQ5 167 aa7.1□□□□□ -1.27
TDP1-213ENST00000555880 TRPC5OSA6NMA1 111 aa7.1□□□□□ -1.27
TDP1-213ENST00000555880 M0QZ92 97 aa7.1□□□□□ -1.27
TDP1-213ENST00000555880 DFFAO00273 331 aa7.1□□□□□ -1.27
TDP1-213ENST00000555880 TXNDC9O14530 226 aa7.1□□□□□ -1.27
TDP1-213ENST00000555880 ZMPSTE24O75844 475 aa7.1□□□□□ -1.27
TDP1-213ENST00000555880 PIGNO95427 931 aa7.1□□□□□ -1.27
TDP1-213ENST00000555880 FYNP06241 537 aa7.1□□□□□ -1.27
TDP1-213ENST00000555880 STMN1P16949 149 aa7.1□□□□□ -1.27
TDP1-213ENST00000555880 GLDCP23378 1020 aa7.1□□□□□ -1.27
TDP1-213ENST00000555880 MPSTP25325 297 aa7.1□□□□□ -1.27
TDP1-213ENST00000555880 PIK3R1P27986 724 aa7.1□□□□□ -1.27
TDP1-213ENST00000555880 PEX2P28328 305 aa7.1□□□□□ -1.27
TDP1-213ENST00000555880 NMBRP28336 390 aa7.1□□□□□ -1.27
TDP1-213ENST00000555880 CYP2C18P33260 490 aa7.1□□□□□ -1.27
TDP1-213ENST00000555880 GMPRP36959 345 aa7.1□□□□□ -1.27
TDP1-213ENST00000555880 CXCR3P49682 368 aa7.1□□□□□ -1.27
TDP1-213ENST00000555880 NUMBP49757 651 aa7.1□□□□□ -1.27
TDP1-213ENST00000555880 SLC12A2P55011 1212 aa7.1□□□□□ -1.27
TDP1-213ENST00000555880 SH3BGRP55822 239 aaPredicted RBP7.1□□□□□ -1.27
TDP1-213ENST00000555880 POLE2P56282 527 aa7.1□□□□□ -1.27
TDP1-213ENST00000555880 ROR2Q01974 943 aaKnown RBP7.1□□□□□ -1.27
TDP1-213ENST00000555880 FLOT2Q14254 428 aa7.1□□□□□ -1.27
TDP1-213ENST00000555880 HERC3Q15034 1050 aa7.1□□□□□ -1.27
TDP1-213ENST00000555880 RBBP5Q15291 538 aaKnown RBP7.1□□□□□ -1.27
TDP1-213ENST00000555880 RAB41Q5JT25 222 aa7.1□□□□□ -1.27
TDP1-213ENST00000555880 PCID2Q5JVF3 399 aa7.1□□□□□ -1.27
TDP1-213ENST00000555880 RARS2Q5T160 578 aaKnown RBP7.1□□□□□ -1.27
TDP1-213ENST00000555880 RASIP1Q5U651 963 aa7.1□□□□□ -1.27
TDP1-213ENST00000555880 RWDD4Q6NW29 188 aaKnown RBP7.1□□□□□ -1.27
TDP1-213ENST00000555880 ZFP1Q6P2D0 407 aa7.1□□□□□ -1.27
TDP1-213ENST00000555880 TMC7Q7Z402 723 aa7.1□□□□□ -1.27
TDP1-213ENST00000555880 TLK2Q86UE8 772 aa7.1□□□□□ -1.27
TDP1-213ENST00000555880 ZC3HC1Q86WB0 502 aaKnown RBP7.1□□□□□ -1.27
TDP1-213ENST00000555880 SNX32Q86XE0 403 aa7.1□□□□□ -1.27
TDP1-213ENST00000555880 GALNT15Q8N3T1 639 aa7.1□□□□□ -1.27
TDP1-213ENST00000555880 AFAP1L2Q8N4X5 818 aa7.1□□□□□ -1.27
TDP1-213ENST00000555880 RNF169Q8NCN4 708 aa7.1□□□□□ -1.27
TDP1-213ENST00000555880 IRGQQ8WZA9 623 aa7.1□□□□□ -1.27
TDP1-213ENST00000555880 EDEM1Q92611 657 aa7.1□□□□□ -1.27
TDP1-213ENST00000555880 PCED1BQ96HM7 432 aa7.1□□□□□ -1.27
TDP1-213ENST00000555880 LRGUKQ96M69 825 aa7.1□□□□□ -1.27
TDP1-213ENST00000555880 PGLYRP2Q96PD5 576 aa7.1□□□□□ -1.27
TDP1-213ENST00000555880 LENG8Q96PV6 779 aaPredicted RBP7.1□□□□□ -1.27
TDP1-213ENST00000555880 BTBD9Q96Q07 612 aa7.1□□□□□ -1.27
TDP1-213ENST00000555880 OR52B2Q96RD2 323 aa7.1□□□□□ -1.27
TDP1-213ENST00000555880 TUBGCP5Q96RT8 1024 aa7.1□□□□□ -1.27
TDP1-213ENST00000555880 PHOX2BQ99453 314 aa7.1□□□□□ -1.27
TDP1-213ENST00000555880 SMOQ99835 787 aa7.1□□□□□ -1.27
TDP1-213ENST00000555880 TBL1YQ9BQ87 522 aa7.1□□□□□ -1.27
TDP1-213ENST00000555880 KIFC1Q9BW19 673 aa7.1□□□□□ -1.27
TDP1-213ENST00000555880 KATNAL1Q9BW62 490 aa7.1□□□□□ -1.27
TDP1-213ENST00000555880 CRTAC1Q9NQ79 661 aa7.1□□□□□ -1.27
TDP1-213ENST00000555880 UBP1Q9NZI7 540 aa7.1□□□□□ -1.27
TDP1-213ENST00000555880 ADAMTS6Q9UKP5 1117 aa7.1□□□□□ -1.27
TDP1-213ENST00000555880 CDH9Q9ULB4 789 aa7.1□□□□□ -1.27
TDP1-213ENST00000555880 RUVBL2Q9Y230 463 aaKnown RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms