RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 DLG1Q12959 904 aa3.2□□□□□ -1.9
SRP54-207ENST00000555535 MYBPHQ13203 477 aa3.2□□□□□ -1.9
SRP54-207ENST00000555535 ZNF569Q5MCW4 686 aa3.2□□□□□ -1.9
SRP54-207ENST00000555535 NAPEPLDQ6IQ20 393 aa3.2□□□□□ -1.9
SRP54-207ENST00000555535 GTSCR1Q86UQ5 136 aa3.2□□□□□ -1.9
SRP54-207ENST00000555535 GRAPLQ8TC17 118 aaPredicted RBP3.2□□□□□ -1.9
SRP54-207ENST00000555535 NEK9Q8TD19 979 aa3.2□□□□□ -1.9
SRP54-207ENST00000555535 TAS1R2Q8TE23 839 aa3.2□□□□□ -1.9
SRP54-207ENST00000555535 RIPOR3Q96MK2 946 aa3.2□□□□□ -1.9
SRP54-207ENST00000555535 ZNF385AQ96PM9 386 aaKnown RBP3.2□□□□□ -1.9
SRP54-207ENST00000555535 SARGQ9BW04 601 aa3.2□□□□□ -1.9
SRP54-207ENST00000555535 ZNF334Q9HCZ1 680 aaPredicted RBP3.2□□□□□ -1.9
SRP54-207ENST00000555535 TM7SF3Q9NS93 570 aa3.2□□□□□ -1.9
SRP54-207ENST00000555535 DDX43Q9NXZ2 648 aaKnown RBP3.2□□□□□ -1.9
SRP54-207ENST00000555535 PCDHA10Q9Y5I2 948 aa3.2□□□□□ -1.9
SRP54-207ENST00000555535 A0A0A0MQY5 61 aa3.19□□□□□ -1.9
SRP54-207ENST00000555535 FAM90A18PA6NE21 464 aa3.19□□□□□ -1.9
SRP54-207ENST00000555535 FAM90A16PA6NEW6 464 aa3.19□□□□□ -1.9
SRP54-207ENST00000555535 FAM90A9PA6NNJ1 464 aa3.19□□□□□ -1.9
SRP54-207ENST00000555535 FAM90A5PA8MXJ8 464 aa3.19□□□□□ -1.9
SRP54-207ENST00000555535 HNRNPDLO14979 420 aaKnown RBP3.19□□□□□ -1.9
SRP54-207ENST00000555535 SLC22A3O75751 556 aa3.19□□□□□ -1.9
SRP54-207ENST00000555535 FAM90A15PP0C7V4 464 aa3.19□□□□□ -1.9
SRP54-207ENST00000555535 FAM90A14PP0C7W9 464 aa3.19□□□□□ -1.9
SRP54-207ENST00000555535 TYK2P29597 1187 aa3.19□□□□□ -1.9
SRP54-207ENST00000555535 NR0B1P51843 470 aaKnown RBP3.19□□□□□ -1.9
SRP54-207ENST00000555535 SAFBQ15424 915 aaKnown RBP eCLIP3.19□□□□□ -1.9
SRP54-207ENST00000555535 SYTL3Q4VX76 610 aa3.19□□□□□ -1.9
SRP54-207ENST00000555535 FAM171A1Q5VUB5 890 aa3.19□□□□□ -1.9
SRP54-207ENST00000555535 MTFR2Q6P444 385 aa3.19□□□□□ -1.9
SRP54-207ENST00000555535 RNF144BQ7Z419 303 aa3.19□□□□□ -1.9
SRP54-207ENST00000555535 DPP9Q86TI2 863 aa3.19□□□□□ -1.9
SRP54-207ENST00000555535 TRIM74Q86UV6 250 aa3.19□□□□□ -1.9
SRP54-207ENST00000555535 TRIM73Q86UV7 250 aa3.19□□□□□ -1.9
SRP54-207ENST00000555535 FMNL3Q8IVF7 1028 aa3.19□□□□□ -1.9
SRP54-207ENST00000555535 NRSN1Q8IZ57 195 aa3.19□□□□□ -1.9
SRP54-207ENST00000555535 MIGA1Q8NAN2 632 aa3.19□□□□□ -1.9
SRP54-207ENST00000555535 OR1N1Q8NGS0 311 aa3.19□□□□□ -1.9
SRP54-207ENST00000555535 GFM1Q96RP9 751 aaKnown RBP3.19□□□□□ -1.9
SRP54-207ENST00000555535 NPAS1Q99742 590 aa3.19□□□□□ -1.9
SRP54-207ENST00000555535 TMEM120AQ9BXJ8 343 aa3.19□□□□□ -1.9
SRP54-207ENST00000555535 TP63Q9H3D4 680 aaPredicted RBP3.19□□□□□ -1.9
SRP54-207ENST00000555535 CDH22Q9UJ99 828 aa3.19□□□□□ -1.9
SRP54-207ENST00000555535 SLC39A10Q9ULF5 831 aa3.19□□□□□ -1.9
SRP54-207ENST00000555535 CNTN6Q9UQ52 1028 aa3.19□□□□□ -1.9
SRP54-207ENST00000555535 PCDHGB2Q9Y5G2 931 aa3.19□□□□□ -1.9
SRP54-207ENST00000555535 MBD3L5A6NJ08 208 aaPredicted RBP3.18□□□□□ -1.9
SRP54-207ENST00000555535 RASA4BC9J798 803 aa3.18□□□□□ -1.9
SRP54-207ENST00000555535 RASA4O43374 803 aa3.18□□□□□ -1.9
SRP54-207ENST00000555535 ITM2AO43736 263 aa3.18□□□□□ -1.9
SRP54-207ENST00000555535 TMCC1O94876 653 aa3.18□□□□□ -1.9
SRP54-207ENST00000555535 HEXIM1O94992 359 aaKnown RBP3.18□□□□□ -1.9
SRP54-207ENST00000555535 CLDN7O95471 211 aa3.18□□□□□ -1.9
SRP54-207ENST00000555535 TM4SF4P48230 202 aa3.18□□□□□ -1.9
SRP54-207ENST00000555535 RCAN1P53805 252 aa3.18□□□□□ -1.9
SRP54-207ENST00000555535 CDH12P55289 794 aa3.18□□□□□ -1.9
SRP54-207ENST00000555535 KRTAP10-1P60331 282 aa3.18□□□□□ -1.9
SRP54-207ENST00000555535 MYBPC2Q14324 1141 aa3.18□□□□□ -1.9
SRP54-207ENST00000555535 BTBD16Q32M84 506 aa3.18□□□□□ -1.9
SRP54-207ENST00000555535 TRIM60Q495X7 471 aa3.18□□□□□ -1.9
SRP54-207ENST00000555535 IZUMO3Q5VZ72 239 aa3.18□□□□□ -1.9
SRP54-207ENST00000555535 MON1BQ7L1V2 547 aa3.18□□□□□ -1.9
SRP54-207ENST00000555535 OR2C3Q8N628 320 aa3.18□□□□□ -1.9
SRP54-207ENST00000555535 ENDOVQ8N8Q3 282 aaKnown RBP3.18□□□□□ -1.9
SRP54-207ENST00000555535 ZNF114Q8NC26 417 aa3.18□□□□□ -1.9
SRP54-207ENST00000555535 ZNF414Q96IQ9 312 aa3.18□□□□□ -1.9
SRP54-207ENST00000555535 PRPF18Q99633 342 aaKnown RBP3.18□□□□□ -1.9
SRP54-207ENST00000555535 STK33Q9BYT3 514 aa3.18□□□□□ -1.9
SRP54-207ENST00000555535 SLC22A11Q9NSA0 550 aa3.18□□□□□ -1.9
SRP54-207ENST00000555535 NFU1Q9UMS0 254 aa3.18□□□□□ -1.9
SRP54-207ENST00000555535 CEP83Q9Y592 693 aa3.18□□□□□ -1.9
SRP54-207ENST00000555535 PRSS21Q9Y6M0 314 aa3.18□□□□□ -1.9
SRP54-207ENST00000555535 MST1RQ04912 1400 aa3.18□□□□□ -1.9
SRP54-207ENST00000555535 IGHV4OR15-8A0A075B7B6 117 aa3.17□□□□□ -1.9
SRP54-207ENST00000555535 ASNA1O43681 348 aa3.17□□□□□ -1.9
SRP54-207ENST00000555535 ATP1A1P05023 1023 aaKnown RBP3.17□□□□□ -1.9
SRP54-207ENST00000555535 PRKCHP24723 683 aa3.17□□□□□ -1.9
SRP54-207ENST00000555535 LPAL2Q16609 132 aa3.17□□□□□ -1.9
SRP54-207ENST00000555535 C5orf22Q49AR2 442 aa3.17□□□□□ -1.9
SRP54-207ENST00000555535 TEX45Q8NA69 505 aa3.17□□□□□ -1.9
SRP54-207ENST00000555535 C2CD4CQ8TF44 421 aa3.17□□□□□ -1.9
SRP54-207ENST00000555535 KIAA1191Q96A73 305 aa3.17□□□□□ -1.9
SRP54-207ENST00000555535 UBXN6Q9BZV1 441 aa3.17□□□□□ -1.9
SRP54-207ENST00000555535 SEPSECSQ9HD40 501 aaKnown RBP3.17□□□□□ -1.9
SRP54-207ENST00000555535 FNIP2Q9P278 1114 aa3.17□□□□□ -1.9
SRP54-207ENST00000555535 CACNA1FO60840 1977 aa3.17□□□□□ -1.9
SRP54-207ENST00000555535 DDTLA6NHG4 134 aaPredicted RBP3.16□□□□□ -1.9
SRP54-207ENST00000555535 NPIPB13A6NJU9 1138 aa3.16□□□□□ -1.9
SRP54-207ENST00000555535 AQP12BA6NM10 295 aa3.16□□□□□ -1.9
SRP54-207ENST00000555535 NPIPB5A8MRT5 1133 aa3.16□□□□□ -1.9
SRP54-207ENST00000555535 NPIPB4C9JG80 1138 aa3.16□□□□□ -1.9
SRP54-207ENST00000555535 GRM8O00222 908 aa3.16□□□□□ -1.9
SRP54-207ENST00000555535 LARGE1O95461 756 aa3.16□□□□□ -1.9
SRP54-207ENST00000555535 AFPP02771 609 aaKnown RBP3.16□□□□□ -1.9
SRP54-207ENST00000555535 FCGR2AP12318 317 aa3.16□□□□□ -1.9
SRP54-207ENST00000555535 LYL1P12980 280 aa3.16□□□□□ -1.9
SRP54-207ENST00000555535 ENO3P13929 434 aaPredicted RBP3.16□□□□□ -1.9
SRP54-207ENST00000555535 TRIM27P14373 513 aa3.16□□□□□ -1.9
SRP54-207ENST00000555535 MXI1P50539 228 aa3.16□□□□□ -1.9
SRP54-207ENST00000555535 CDK18Q07002 472 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms