RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 PCDHB16Q9NRJ7 776 aa5.75□□□□□ -1.49
VRK1-205ENST00000555402 TBC1D14Q9P2M4 693 aa5.75□□□□□ -1.49
VRK1-205ENST00000555402 HDAC6Q9UBN7 1215 aa5.75□□□□□ -1.49
VRK1-205ENST00000555402 RABGAP1Q9Y3P9 1069 aa5.75□□□□□ -1.49
VRK1-205ENST00000555402 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.74□□□□□ -1.49
VRK1-205ENST00000555402 TMEM247A6NEH6 219 aa5.74□□□□□ -1.49
VRK1-205ENST00000555402 MSI1O43347 362 aaKnown RBP5.74□□□□□ -1.49
VRK1-205ENST00000555402 CEP104O60308 925 aa5.74□□□□□ -1.49
VRK1-205ENST00000555402 USP12O75317 370 aa5.74□□□□□ -1.49
VRK1-205ENST00000555402 SPARCP09486 303 aa5.74□□□□□ -1.49
VRK1-205ENST00000555402 FCGR2AP12318 317 aa5.74□□□□□ -1.49
VRK1-205ENST00000555402 ARL3P36405 182 aa5.74□□□□□ -1.49
VRK1-205ENST00000555402 STAT1P42224 750 aa5.74□□□□□ -1.49
VRK1-205ENST00000555402 SOX2P48431 317 aa5.74□□□□□ -1.49
VRK1-205ENST00000555402 CTCFP49711 727 aaPredicted RBP5.74□□□□□ -1.49
VRK1-205ENST00000555402 CYP2J2P51589 502 aa5.74□□□□□ -1.49
VRK1-205ENST00000555402 DAZAP2Q15038 168 aaPredicted RBP5.74□□□□□ -1.49
VRK1-205ENST00000555402 TOMM20Q15388 145 aa5.74□□□□□ -1.49
VRK1-205ENST00000555402 TRIP6Q15654 476 aaKnown RBP5.74□□□□□ -1.49
VRK1-205ENST00000555402 FAM171A1Q5VUB5 890 aa5.74□□□□□ -1.49
VRK1-205ENST00000555402 SPATA1Q5VX52 437 aa5.74□□□□□ -1.49
VRK1-205ENST00000555402 GALNT16Q8N428 558 aa5.74□□□□□ -1.49
VRK1-205ENST00000555402 PAQR4Q8N4S7 273 aaPredicted RBP5.74□□□□□ -1.49
VRK1-205ENST00000555402 CCDC89Q8N998 374 aa5.74□□□□□ -1.49
VRK1-205ENST00000555402 SETD9Q8NE22 299 aa5.74□□□□□ -1.49
VRK1-205ENST00000555402 ETNPPLQ8TBG4 499 aa5.74□□□□□ -1.49
VRK1-205ENST00000555402 P2RY11Q96G91 374 aa5.74□□□□□ -1.49
VRK1-205ENST00000555402 ASB2Q96Q27 587 aa5.74□□□□□ -1.49
VRK1-205ENST00000555402 EFHD1Q9BUP0 239 aa5.74□□□□□ -1.49
VRK1-205ENST00000555402 TM2D2Q9BX73 214 aa5.74□□□□□ -1.49
VRK1-205ENST00000555402 Q9N2J8 555 aa5.74□□□□□ -1.49
VRK1-205ENST00000555402 DIAPH3Q9NSV4 1193 aa5.74□□□□□ -1.49
VRK1-205ENST00000555402 ZDHHC7Q9NXF8 308 aa5.74□□□□□ -1.49
VRK1-205ENST00000555402 PEMTQ9UBM1 199 aa5.74□□□□□ -1.49
VRK1-205ENST00000555402 OR6C68A6NDL8 312 aa5.73□□□□□ -1.49
VRK1-205ENST00000555402 K7ENM7 598 aa5.73□□□□□ -1.49
VRK1-205ENST00000555402 INPPL1O15357 1258 aa5.73□□□□□ -1.49
VRK1-205ENST00000555402 CLEC3BP05452 202 aa5.73□□□□□ -1.49
VRK1-205ENST00000555402 CYP2A6P11509 494 aaPredicted RBP5.73□□□□□ -1.49
VRK1-205ENST00000555402 CHRNA5P30532 468 aa5.73□□□□□ -1.49
VRK1-205ENST00000555402 ABCD1P33897 745 aa5.73□□□□□ -1.49
VRK1-205ENST00000555402 ARL1P40616 181 aaPredicted RBP5.73□□□□□ -1.49
VRK1-205ENST00000555402 PTPN9P43378 593 aa5.73□□□□□ -1.49
VRK1-205ENST00000555402 CPA2P48052 419 aa5.73□□□□□ -1.49
VRK1-205ENST00000555402 RHAGQ02094 409 aa5.73□□□□□ -1.49
VRK1-205ENST00000555402 ZBTB16Q05516 673 aa5.73□□□□□ -1.49
VRK1-205ENST00000555402 EIF4A2Q14240 407 aaKnown RBP5.73□□□□□ -1.49
VRK1-205ENST00000555402 EDRF1Q3B7T1 1238 aa5.73□□□□□ -1.49
VRK1-205ENST00000555402 FBXO43Q4G163 708 aa5.73□□□□□ -1.49
VRK1-205ENST00000555402 TMEM268Q5VZI3 342 aa5.73□□□□□ -1.49
VRK1-205ENST00000555402 KIAA1161Q6NSJ0 714 aa5.73□□□□□ -1.49
VRK1-205ENST00000555402 DLK2Q6UY11 383 aa5.73□□□□□ -1.49
VRK1-205ENST00000555402 CPXM2Q8N436 756 aa5.73□□□□□ -1.49
VRK1-205ENST00000555402 TMEM217Q8N7C4 229 aa5.73□□□□□ -1.49
VRK1-205ENST00000555402 PLD5Q8N7P1 536 aa5.73□□□□□ -1.49
VRK1-205ENST00000555402 OSR1Q8TAX0 266 aaPredicted RBP5.73□□□□□ -1.49
VRK1-205ENST00000555402 ZFPM2Q8WW38 1151 aa5.73□□□□□ -1.49
VRK1-205ENST00000555402 KLHL15Q96M94 604 aa5.73□□□□□ -1.49
VRK1-205ENST00000555402 TREX2Q9BQ50 279 aaPredicted RBP5.73□□□□□ -1.49
VRK1-205ENST00000555402 LBHD1Q9BQE6 289 aaPredicted RBP5.73□□□□□ -1.49
VRK1-205ENST00000555402 GATA5Q9BWX5 397 aaPredicted RBP5.73□□□□□ -1.49
VRK1-205ENST00000555402 ENTPD7Q9NQZ7 604 aa5.73□□□□□ -1.49
VRK1-205ENST00000555402 EIF2B3Q9NR50 452 aaKnown RBP5.73□□□□□ -1.49
VRK1-205ENST00000555402 MPP6Q9NZW5 540 aa5.73□□□□□ -1.49
VRK1-205ENST00000555402 A6NCN8 305 aa5.72□□□□□ -1.49
VRK1-205ENST00000555402 CXorf65A6NEN9 183 aa5.72□□□□□ -1.49
VRK1-205ENST00000555402 C17orf100A8MU93 164 aa5.72□□□□□ -1.49
VRK1-205ENST00000555402 KCNJ18B7U540 433 aa5.72□□□□□ -1.49
VRK1-205ENST00000555402 AP3D1O14617 1153 aa5.72□□□□□ -1.49
VRK1-205ENST00000555402 TNFSF14O43557 240 aa5.72□□□□□ -1.49
VRK1-205ENST00000555402 PLAUP00749 431 aa5.72□□□□□ -1.49
VRK1-205ENST00000555402 IL1AP01583 271 aa5.72□□□□□ -1.49
VRK1-205ENST00000555402 ACADMP11310 421 aa5.72□□□□□ -1.49
VRK1-205ENST00000555402 RPS6KB1P23443 525 aa5.72□□□□□ -1.49
VRK1-205ENST00000555402 ARHGAP25P42331 645 aa5.72□□□□□ -1.49
VRK1-205ENST00000555402 DRG2P55039 364 aaKnown RBP5.72□□□□□ -1.49
VRK1-205ENST00000555402 RPS3AP61247 264 aaKnown RBP5.72□□□□□ -1.49
VRK1-205ENST00000555402 YPEL5P62699 121 aa5.72□□□□□ -1.49
VRK1-205ENST00000555402 MAMLD1Q13495 774 aa5.72□□□□□ -1.49
VRK1-205ENST00000555402 SEMA3AQ14563 771 aa5.72□□□□□ -1.49
VRK1-205ENST00000555402 KCTD2Q14681 263 aa5.72□□□□□ -1.49
VRK1-205ENST00000555402 C5orf22Q49AR2 442 aa5.72□□□□□ -1.49
VRK1-205ENST00000555402 SLC9B1Q4ZJI4 515 aa5.72□□□□□ -1.49
VRK1-205ENST00000555402 ZNF667Q5HYK9 610 aa5.72□□□□□ -1.49
VRK1-205ENST00000555402 TTLL5Q6EMB2 1281 aa5.72□□□□□ -1.49
VRK1-205ENST00000555402 TMEM81Q6P7N7 255 aa5.72□□□□□ -1.49
VRK1-205ENST00000555402 CCDC129Q6ZRS4 1044 aa5.72□□□□□ -1.49
VRK1-205ENST00000555402 CYB5R4Q7L1T6 521 aa5.72□□□□□ -1.49
VRK1-205ENST00000555402 CNGA4Q8IV77 575 aa5.72□□□□□ -1.49
VRK1-205ENST00000555402 ARL14EPQ8N8R7 260 aaPredicted RBP5.72□□□□□ -1.49
VRK1-205ENST00000555402 NSMCE1Q8WV22 266 aa5.72□□□□□ -1.49
VRK1-205ENST00000555402 KLHL29Q96CT2 875 aa5.72□□□□□ -1.49
VRK1-205ENST00000555402 NR1H4Q96RI1 486 aaPredicted RBP5.72□□□□□ -1.49
VRK1-205ENST00000555402 RANBP17Q9H2T7 1088 aaKnown RBP5.72□□□□□ -1.49
VRK1-205ENST00000555402 HAUS2Q9NVX0 235 aa5.72□□□□□ -1.49
VRK1-205ENST00000555402 BABAM1Q9NWV8 329 aa5.72□□□□□ -1.49
VRK1-205ENST00000555402 PSAT1Q9Y617 370 aa5.72□□□□□ -1.49
VRK1-205ENST00000555402 PIAS3Q9Y6X2 628 aa5.72□□□□□ -1.49
VRK1-205ENST00000555402 C17orf113A0A1B0GUU1 675 aa5.71□□□□□ -1.5
VRK1-205ENST00000555402 SOCS2O14508 198 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms