RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 GTPBP2Q9BX10 602 aaKnown RBP7.68□□□□□ -1.18
LINC00640-201ENST00000554409 TRIM7Q9C029 511 aa7.68□□□□□ -1.18
LINC00640-201ENST00000554409 MIR1-1HGQ9H1L0 117 aa7.68□□□□□ -1.18
LINC00640-201ENST00000554409 NOL6Q9H6R4 1146 aaKnown RBP7.68□□□□□ -1.18
LINC00640-201ENST00000554409 CATSPERBQ9H7T0 1116 aa7.68□□□□□ -1.18
LINC00640-201ENST00000554409 TM9SF3Q9HD45 589 aa7.68□□□□□ -1.18
LINC00640-201ENST00000554409 FSCN3Q9NQT6 498 aa7.68□□□□□ -1.18
LINC00640-201ENST00000554409 IL36AQ9UHA7 158 aa7.68□□□□□ -1.18
LINC00640-201ENST00000554409 DNAI1Q9UI46 699 aa7.68□□□□□ -1.18
LINC00640-201ENST00000554409 HPCAL4Q9UM19 191 aa7.68□□□□□ -1.18
LINC00640-201ENST00000554409 NENFQ9UMX5 172 aa7.68□□□□□ -1.18
LINC00640-201ENST00000554409 AP4E1Q9UPM8 1137 aa7.68□□□□□ -1.18
LINC00640-201ENST00000554409 DNAH14Q0VDD8 3507 aa7.67□□□□□ -1.18
LINC00640-201ENST00000554409 A0A087X0T9 212 aa7.67□□□□□ -1.18
LINC00640-201ENST00000554409 ZSCAN5CA6NGD5 496 aaPredicted RBP7.67□□□□□ -1.18
LINC00640-201ENST00000554409 KDELR3O43731 214 aa7.67□□□□□ -1.18
LINC00640-201ENST00000554409 CREB3O43889 395 aa7.67□□□□□ -1.18
LINC00640-201ENST00000554409 PRPSAP2O60256 369 aa7.67□□□□□ -1.18
LINC00640-201ENST00000554409 LRCH4O75427 683 aa7.67□□□□□ -1.18
LINC00640-201ENST00000554409 GSRP00390 522 aa7.67□□□□□ -1.18
LINC00640-201ENST00000554409 CYP1A2P05177 515 aa7.67□□□□□ -1.18
LINC00640-201ENST00000554409 FAM228BP0C875 321 aa7.67□□□□□ -1.18
LINC00640-201ENST00000554409 CD59P13987 128 aa7.67□□□□□ -1.18
LINC00640-201ENST00000554409 MIPP30301 263 aa7.67□□□□□ -1.18
LINC00640-201ENST00000554409 PCK1P35558 622 aa7.67□□□□□ -1.18
LINC00640-201ENST00000554409 NUDT1P36639 197 aa7.67□□□□□ -1.18
LINC00640-201ENST00000554409 RECQLP46063 649 aaPredicted RBP7.67□□□□□ -1.18
LINC00640-201ENST00000554409 NOVA1P51513 510 aaKnown RBP7.67□□□□□ -1.18
LINC00640-201ENST00000554409 TPI1P60174 286 aa7.67□□□□□ -1.18
LINC00640-201ENST00000554409 BNC1Q01954 994 aa7.67□□□□□ -1.18
LINC00640-201ENST00000554409 CCDC15Q0P6D6 951 aa7.67□□□□□ -1.18
LINC00640-201ENST00000554409 CNTN1Q12860 1018 aa7.67□□□□□ -1.18
LINC00640-201ENST00000554409 POLD3Q15054 466 aaPredicted RBP7.67□□□□□ -1.18
LINC00640-201ENST00000554409 TEAD4Q15561 434 aa7.67□□□□□ -1.18
LINC00640-201ENST00000554409 UAP1L1Q3KQV9 507 aa7.67□□□□□ -1.18
LINC00640-201ENST00000554409 PARP15Q460N3 678 aa7.67□□□□□ -1.18
LINC00640-201ENST00000554409 CARD16Q5EG05 197 aa7.67□□□□□ -1.18
LINC00640-201ENST00000554409 PIP5KL1Q5T9C9 394 aa7.67□□□□□ -1.18
LINC00640-201ENST00000554409 SPECC1LQ69YQ0 1117 aa7.67□□□□□ -1.18
LINC00640-201ENST00000554409 NEK5Q6P3R8 708 aa7.67□□□□□ -1.18
LINC00640-201ENST00000554409 ALKBH5Q6P6C2 394 aaKnown RBP7.67□□□□□ -1.18
LINC00640-201ENST00000554409 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.67□□□□□ -1.18
LINC00640-201ENST00000554409 DPY19L3Q6ZPD9 716 aa7.67□□□□□ -1.18
LINC00640-201ENST00000554409 NIPA2Q8N8Q9 360 aa7.67□□□□□ -1.18
LINC00640-201ENST00000554409 OR14C36Q8NHC7 312 aa7.67□□□□□ -1.18
LINC00640-201ENST00000554409 CASKIN2Q8WXE0 1202 aa7.67□□□□□ -1.18
LINC00640-201ENST00000554409 PPP1R16AQ96I34 528 aa7.67□□□□□ -1.18
LINC00640-201ENST00000554409 PEBP4Q96S96 227 aa7.67□□□□□ -1.18
LINC00640-201ENST00000554409 DNAJC7Q99615 494 aa7.67□□□□□ -1.18
LINC00640-201ENST00000554409 SNRNP25Q9BV90 132 aaKnown RBP7.67□□□□□ -1.18
LINC00640-201ENST00000554409 HDAC8Q9BY41 377 aa7.67□□□□□ -1.18
LINC00640-201ENST00000554409 EBF2Q9HAK2 575 aa7.67□□□□□ -1.18
LINC00640-201ENST00000554409 PREBQ9HCU5 417 aa7.67□□□□□ -1.18
LINC00640-201ENST00000554409 DONSONQ9NYP3 566 aa7.67□□□□□ -1.18
LINC00640-201ENST00000554409 ARHGAP20Q9P2F6 1191 aa7.67□□□□□ -1.18
LINC00640-201ENST00000554409 PCDHGB2Q9Y5G2 931 aa7.67□□□□□ -1.18
LINC00640-201ENST00000554409 SLCO1B1Q9Y6L6 691 aa7.67□□□□□ -1.18
LINC00640-201ENST00000554409 WASF2Q9Y6W5 498 aa7.67□□□□□ -1.18
LINC00640-201ENST00000554409 ASCC3Q8N3C0 2202 aaKnown RBP7.67□□□□□ -1.18
LINC00640-201ENST00000554409 GON4LQ3T8J9 2241 aa7.66□□□□□ -1.18
LINC00640-201ENST00000554409 TBC1D3DA0A087WVF3 549 aa7.66□□□□□ -1.18
LINC00640-201ENST00000554409 TBC1D3IA0A087WXS9 549 aa7.66□□□□□ -1.18
LINC00640-201ENST00000554409 TBC1D3EA0A087X179 549 aa7.66□□□□□ -1.18
LINC00640-201ENST00000554409 TBC1D3KA0A087X1G2 549 aa7.66□□□□□ -1.18
LINC00640-201ENST00000554409 A0A1B0GVT2 93 aa7.66□□□□□ -1.18
LINC00640-201ENST00000554409 TBC1D3FA6NER0 549 aaPredicted RBP7.66□□□□□ -1.18
LINC00640-201ENST00000554409 FAM47DPA6NHR8 397 aa7.66□□□□□ -1.18
LINC00640-201ENST00000554409 TBC1D3LB9A6J9 549 aa7.66□□□□□ -1.18
LINC00640-201ENST00000554409 RASA4BC9J798 803 aa7.66□□□□□ -1.18
LINC00640-201ENST00000554409 PLK4O00444 970 aa7.66□□□□□ -1.18
LINC00640-201ENST00000554409 KPNA3O00505 521 aaPredicted RBP7.66□□□□□ -1.18
LINC00640-201ENST00000554409 VILLO15195 856 aa7.66□□□□□ -1.18
LINC00640-201ENST00000554409 RASA4O43374 803 aa7.66□□□□□ -1.18
LINC00640-201ENST00000554409 BNIP3LO60238 219 aa7.66□□□□□ -1.18
LINC00640-201ENST00000554409 LEFTY1O75610 366 aa7.66□□□□□ -1.18
LINC00640-201ENST00000554409 TBC1D3HP0C7X1 549 aa7.66□□□□□ -1.18
LINC00640-201ENST00000554409 ITGB7P26010 798 aa7.66□□□□□ -1.18
LINC00640-201ENST00000554409 CTSKP43235 329 aa7.66□□□□□ -1.18
LINC00640-201ENST00000554409 HCAR3P49019 387 aa7.66□□□□□ -1.18
LINC00640-201ENST00000554409 CSNK1EP49674 416 aaKnown RBP7.66□□□□□ -1.18
LINC00640-201ENST00000554409 CCNHP51946 323 aaPredicted RBP7.66□□□□□ -1.18
LINC00640-201ENST00000554409 NDST2P52849 883 aa7.66□□□□□ -1.18
LINC00640-201ENST00000554409 TAS2R38P59533 333 aa7.66□□□□□ -1.18
LINC00640-201ENST00000554409 PPP2CBP62714 309 aa7.66□□□□□ -1.18
LINC00640-201ENST00000554409 PPP2CAP67775 309 aa7.66□□□□□ -1.18
LINC00640-201ENST00000554409 SERINC3Q13530 473 aa7.66□□□□□ -1.18
LINC00640-201ENST00000554409 HNRNPDQ14103 355 aaKnown RBP7.66□□□□□ -1.18
LINC00640-201ENST00000554409 PIGHQ14442 188 aaPredicted RBP7.66□□□□□ -1.18
LINC00640-201ENST00000554409 NFKBIBQ15653 356 aa7.66□□□□□ -1.18
LINC00640-201ENST00000554409 CA9Q16790 459 aa7.66□□□□□ -1.18
LINC00640-201ENST00000554409 ZNF423Q2M1K9 1284 aa7.66□□□□□ -1.18
LINC00640-201ENST00000554409 HLA-BQ31612 363 aa7.66□□□□□ -1.18
LINC00640-201ENST00000554409 INO80DQ53TQ3 878 aaPredicted RBP7.66□□□□□ -1.18
LINC00640-201ENST00000554409 N4BP2L1Q5TBK1 243 aaPredicted RBP7.66□□□□□ -1.18
LINC00640-201ENST00000554409 AFMIDQ63HM1 303 aa7.66□□□□□ -1.18
LINC00640-201ENST00000554409 TBC1D3GQ6DHY5 549 aa7.66□□□□□ -1.18
LINC00640-201ENST00000554409 TBC1D3CQ6IPX1 549 aa7.66□□□□□ -1.18
LINC00640-201ENST00000554409 NAPEPLDQ6IQ20 393 aa7.66□□□□□ -1.18
LINC00640-201ENST00000554409 PSAPL1Q6NUJ1 521 aa7.66□□□□□ -1.18
LINC00640-201ENST00000554409 DBX2Q6ZNG2 339 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms