RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 PDZD3Q86UT5 571 aa19.12■□□□□ 0.65
CPSF2-203ENST00000554290 DCP2Q8IU60 420 aaKnown RBP19.12■□□□□ 0.65
CPSF2-203ENST00000554290 PLPP6Q8IY26 295 aa19.12■□□□□ 0.65
CPSF2-203ENST00000554290 SLC25A45Q8N413 288 aa19.12■□□□□ 0.65
CPSF2-203ENST00000554290 OR13H1Q8NG92 308 aa19.12■□□□□ 0.65
CPSF2-203ENST00000554290 C11orf70Q9BRQ4 267 aa19.12■□□□□ 0.65
CPSF2-203ENST00000554290 SLC17A9Q9BYT1 436 aa19.12■□□□□ 0.65
CPSF2-203ENST00000554290 FZD3Q9NPG1 666 aa19.12■□□□□ 0.65
CPSF2-203ENST00000554290 FCF1Q9Y324 198 aaKnown RBP19.12■□□□□ 0.65
CPSF2-203ENST00000554290 HS3ST3A1Q9Y663 406 aa19.12■□□□□ 0.65
CPSF2-203ENST00000554290 C2CD4BA6NLJ0 364 aa19.11■□□□□ 0.65
CPSF2-203ENST00000554290 A6NNZ2 444 aa19.11■□□□□ 0.65
CPSF2-203ENST00000554290 SIGLEC6O43699 453 aa19.11■□□□□ 0.65
CPSF2-203ENST00000554290 AP1G1O43747 822 aa19.11■□□□□ 0.65
CPSF2-203ENST00000554290 KRT3P12035 628 aa19.11■□□□□ 0.65
CPSF2-203ENST00000554290 ACP1P24666 158 aa19.11■□□□□ 0.65
CPSF2-203ENST00000554290 ACVRL1P37023 503 aa19.11■□□□□ 0.65
CPSF2-203ENST00000554290 NSFP46459 744 aaKnown RBP19.11■□□□□ 0.65
CPSF2-203ENST00000554290 CLDN6P56747 220 aa19.11■□□□□ 0.65
CPSF2-203ENST00000554290 JAM2P57087 298 aa19.11■□□□□ 0.65
CPSF2-203ENST00000554290 CLDN2P57739 230 aa19.11■□□□□ 0.65
CPSF2-203ENST00000554290 E2F1Q01094 437 aa19.11■□□□□ 0.65
CPSF2-203ENST00000554290 MAPK8IP2Q13387 824 aaPredicted RBP19.11■□□□□ 0.65
CPSF2-203ENST00000554290 POLD3Q15054 466 aaPredicted RBP19.11■□□□□ 0.65
CPSF2-203ENST00000554290 MANEALQ5VSG8 457 aa19.11■□□□□ 0.65
CPSF2-203ENST00000554290 ABI3BPQ7Z7G0 1075 aa19.11■□□□□ 0.65
CPSF2-203ENST00000554290 ZSCAN30Q86W11 494 aa19.11■□□□□ 0.65
CPSF2-203ENST00000554290 RYBPQ8N488 228 aaPredicted RBP19.11■□□□□ 0.65
CPSF2-203ENST00000554290 ANKRD20A12PQ8NF67 263 aa19.11■□□□□ 0.65
CPSF2-203ENST00000554290 OR4C6Q8NH72 309 aa19.11■□□□□ 0.65
CPSF2-203ENST00000554290 GPT2Q8TD30 523 aa19.11■□□□□ 0.65
CPSF2-203ENST00000554290 IFT43Q96FT9 208 aa19.11■□□□□ 0.65
CPSF2-203ENST00000554290 LRIG1Q96JA1 1093 aa19.11■□□□□ 0.65
CPSF2-203ENST00000554290 PCMTD1Q96MG8 357 aaPredicted RBP19.11■□□□□ 0.65
CPSF2-203ENST00000554290 MAGEH1Q9H213 219 aa19.11■□□□□ 0.65
CPSF2-203ENST00000554290 ZDHHC6Q9H6R6 413 aa19.11■□□□□ 0.65
CPSF2-203ENST00000554290 LMBRD1Q9NUN5 540 aa19.11■□□□□ 0.65
CPSF2-203ENST00000554290 HECAQ9UBI9 543 aaPredicted RBP19.11■□□□□ 0.65
CPSF2-203ENST00000554290 DNAI1Q9UI46 699 aa19.11■□□□□ 0.65
CPSF2-203ENST00000554290 ITPR1Q14643 2758 aa19.1■□□□□ 0.65
CPSF2-203ENST00000554290 A0A087WV48 116 aa19.1■□□□□ 0.65
CPSF2-203ENST00000554290 TRIM38O00635 465 aa19.1■□□□□ 0.65
CPSF2-203ENST00000554290 PLEKP08567 350 aaPredicted RBP19.1■□□□□ 0.65
CPSF2-203ENST00000554290 ALPPL2P10696 532 aa19.1■□□□□ 0.65
CPSF2-203ENST00000554290 HOXB3P14651 431 aaPredicted RBP19.1■□□□□ 0.65
CPSF2-203ENST00000554290 DAB2P98082 770 aa19.1■□□□□ 0.65
CPSF2-203ENST00000554290 SGCGQ13326 291 aa19.1■□□□□ 0.65
CPSF2-203ENST00000554290 SYCP1Q15431 976 aa19.1■□□□□ 0.65
CPSF2-203ENST00000554290 RAB6CQ53S08 254 aa19.1■□□□□ 0.65
CPSF2-203ENST00000554290 GCNT7Q6ZNI0 430 aa19.1■□□□□ 0.65
CPSF2-203ENST00000554290 Q6ZSR6 202 aa19.1■□□□□ 0.65
CPSF2-203ENST00000554290 NLRP14Q86W24 1093 aa19.1■□□□□ 0.65
CPSF2-203ENST00000554290 CACTIN-AS1Q8N1I8 211 aa19.1■□□□□ 0.65
CPSF2-203ENST00000554290 JOSD2Q8TAC2 188 aa19.1■□□□□ 0.65
CPSF2-203ENST00000554290 CENPIQ92674 756 aaPredicted RBP19.1■□□□□ 0.65
CPSF2-203ENST00000554290 ARHGEF2Q92974 986 aaKnown RBP19.1■□□□□ 0.65
CPSF2-203ENST00000554290 TBC1D31Q96DN5 1066 aa19.1■□□□□ 0.65
CPSF2-203ENST00000554290 TM6SF2Q9BZW4 377 aa19.1■□□□□ 0.65
CPSF2-203ENST00000554290 NRSN2Q9GZP1 204 aa19.1■□□□□ 0.65
CPSF2-203ENST00000554290 RAB6CQ9H0N0 254 aa19.1■□□□□ 0.65
CPSF2-203ENST00000554290 FANCLQ9NW38 375 aa19.1■□□□□ 0.65
CPSF2-203ENST00000554290 TMEM248Q9NWD8 314 aa19.1■□□□□ 0.65
CPSF2-203ENST00000554290 ADAM22Q9P0K1 906 aa19.1■□□□□ 0.65
CPSF2-203ENST00000554290 FADS3Q9Y5Q0 445 aa19.1■□□□□ 0.65
CPSF2-203ENST00000554290 AK5Q9Y6K8 562 aa19.1■□□□□ 0.65
CPSF2-203ENST00000554290 CACNA1GO43497 2377 aa19.1■□□□□ 0.65
CPSF2-203ENST00000554290 ADAMTS20P59510 1910 aa19.1■□□□□ 0.65
CPSF2-203ENST00000554290 NEMP2A6NFY4 417 aa19.09■□□□□ 0.65
CPSF2-203ENST00000554290 EPHB6O15197 1021 aa19.09■□□□□ 0.65
CPSF2-203ENST00000554290 TSPAN6O43657 245 aa19.09■□□□□ 0.65
CPSF2-203ENST00000554290 RAMP2O60895 175 aa19.09■□□□□ 0.65
CPSF2-203ENST00000554290 PIAS2O75928 621 aa19.09■□□□□ 0.65
CPSF2-203ENST00000554290 CD160O95971 181 aa19.09■□□□□ 0.65
CPSF2-203ENST00000554290 PAK4O96013 591 aaPredicted RBP19.09■□□□□ 0.65
CPSF2-203ENST00000554290 CALB1P05937 261 aa19.09■□□□□ 0.65
CPSF2-203ENST00000554290 UNGP13051 313 aaPredicted RBP19.09■□□□□ 0.65
CPSF2-203ENST00000554290 PARS2Q7L3T8 475 aaKnown RBP19.09■□□□□ 0.65
CPSF2-203ENST00000554290 PTAR1Q7Z6K3 402 aaPredicted RBP19.09■□□□□ 0.65
CPSF2-203ENST00000554290 NEK11Q8NG66 645 aa19.09■□□□□ 0.65
CPSF2-203ENST00000554290 FAM172AQ8WUF8 416 aa19.09■□□□□ 0.65
CPSF2-203ENST00000554290 RFFLQ8WZ73 363 aa19.09■□□□□ 0.65
CPSF2-203ENST00000554290 RAB7BQ96AH8 199 aa19.09■□□□□ 0.65
CPSF2-203ENST00000554290 SELENOOQ9BVL4 669 aa19.09■□□□□ 0.65
CPSF2-203ENST00000554290 NDFIP2Q9NV92 336 aa19.09■□□□□ 0.65
CPSF2-203ENST00000554290 UCKL1Q9NWZ5 548 aa19.09■□□□□ 0.65
CPSF2-203ENST00000554290 SIK3Q9Y2K2 1263 aa19.09■□□□□ 0.65
CPSF2-203ENST00000554290 ACTL7AQ9Y615 435 aa19.09■□□□□ 0.65
CPSF2-203ENST00000554290 GOLGA4Q13439 2230 aaKnown RBP19.09■□□□□ 0.65
CPSF2-203ENST00000554290 NBEAQ8NFP9 2946 aa19.08■□□□□ 0.65
CPSF2-203ENST00000554290 WDFY3Q8IZQ1 3526 aa19.08■□□□□ 0.65
CPSF2-203ENST00000554290 ANKRD62A6NC57 917 aa19.08■□□□□ 0.64
CPSF2-203ENST00000554290 ZSCAN5CA6NGD5 496 aaPredicted RBP19.08■□□□□ 0.64
CPSF2-203ENST00000554290 FAM72CH0Y354 149 aa19.08■□□□□ 0.64
CPSF2-203ENST00000554290 KRIT1O00522 736 aa19.08■□□□□ 0.64
CPSF2-203ENST00000554290 NEMP1O14524 444 aa19.08■□□□□ 0.64
CPSF2-203ENST00000554290 FFAR2O15552 330 aa19.08■□□□□ 0.64
CPSF2-203ENST00000554290 LRIG2O94898 1065 aa19.08■□□□□ 0.64
CPSF2-203ENST00000554290 POP4O95707 220 aaKnown RBP19.08■□□□□ 0.64
CPSF2-203ENST00000554290 RFC1P35251 1148 aaPredicted RBP19.08■□□□□ 0.64
CPSF2-203ENST00000554290 COPB1P53618 953 aaKnown RBP19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms