RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 POLR2FP61218 127 aaKnown RBP6.74□□□□□ -1.33
SLIRP-203ENST00000554074 RPS21P63220 83 aaKnown RBP6.74□□□□□ -1.33
SLIRP-203ENST00000554074 ARF5P84085 180 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 PTP4A2Q12974 167 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 ZNF211Q13398 564 aaPredicted RBP6.74□□□□□ -1.33
SLIRP-203ENST00000554074 ZNF284Q2VY69 593 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 PROX2Q3B8N5 592 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 POM121L1PQ3SYA9 428 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 CCDC14Q49A88 953 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 TMEM259Q4ZIN3 620 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 C2CD6Q53TS8 623 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 CARD16Q5EG05 197 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 PRAMEF14Q5SWL7 426 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 DHRS13Q6UX07 377 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 LINGO4Q6UY18 593 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 DPY19L3Q6ZPD9 716 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 TFAP2DQ7Z6R9 452 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 ABI3BPQ7Z7G0 1075 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 NLRP14Q86W24 1093 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 PHF13Q86YI8 300 aaPredicted RBP6.74□□□□□ -1.33
SLIRP-203ENST00000554074 DCP2Q8IU60 420 aaKnown RBP6.74□□□□□ -1.33
SLIRP-203ENST00000554074 EID2Q8N6I1 236 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 EMC1Q8N766 993 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 CHST14Q8NCH0 376 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 C3orf20Q8ND61 904 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 ANKRD20A12PQ8NF67 263 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 OR7D4Q8NG98 312 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 SLC20A1Q8WUM9 679 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 RXFP2Q8WXD0 754 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 ASB12Q8WXK4 309 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 RFFLQ8WZ73 363 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 RAB7BQ96AH8 199 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 NXPE2Q96DL1 559 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 HEPHQ9BQS7 1158 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 SPON2Q9BUD6 331 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 MAGEH1Q9H213 219 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 VPS16Q9H269 839 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 ATP13A1Q9HD20 1204 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 METTL5Q9NRN9 209 aaKnown RBP6.74□□□□□ -1.33
SLIRP-203ENST00000554074 TMPRSS4Q9NRS4 437 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 GPR27Q9NS67 375 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 FAM207AQ9NSI2 230 aaPredicted RBP6.74□□□□□ -1.33
SLIRP-203ENST00000554074 KLHL11Q9NVR0 708 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 FANCLQ9NW38 375 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 TMEM248Q9NWD8 314 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 LIMA1Q9UHB6 759 aaKnown RBP6.74□□□□□ -1.33
SLIRP-203ENST00000554074 LHX6Q9UPM6 363 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 NEU3Q9UQ49 428 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 HS3ST3A1Q9Y663 406 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 WASF2Q9Y6W5 498 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 ZFC3H1O60293 1989 aaKnown RBP6.74□□□□□ -1.33
SLIRP-203ENST00000554074 UNC13CQ8NB66 2214 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 FASNP49327 2511 aaKnown RBP6.74□□□□□ -1.33
SLIRP-203ENST00000554074 BPTFQ12830 3046 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 IGSF10Q6WRI0 2623 aa6.73□□□□□ -1.33
SLIRP-203ENST00000554074 A0A087WV48 116 aa6.73□□□□□ -1.33
SLIRP-203ENST00000554074 TCRBV5S1A1TA0A578 114 aa6.73□□□□□ -1.33
SLIRP-203ENST00000554074 SIGLEC16A6NMB1 481 aa6.73□□□□□ -1.33
SLIRP-203ENST00000554074 SMTNL1A8MU46 457 aa6.73□□□□□ -1.33
SLIRP-203ENST00000554074 EPHB6O15197 1021 aa6.73□□□□□ -1.33
SLIRP-203ENST00000554074 TSPAN6O43657 245 aa6.73□□□□□ -1.33
SLIRP-203ENST00000554074 LRIG2O94898 1065 aa6.73□□□□□ -1.33
SLIRP-203ENST00000554074 CD160O95971 181 aa6.73□□□□□ -1.33
SLIRP-203ENST00000554074 GSRP00390 522 aa6.73□□□□□ -1.33
SLIRP-203ENST00000554074 PLEKP08567 350 aaPredicted RBP6.73□□□□□ -1.33
SLIRP-203ENST00000554074 THEGLP0DJG4 465 aa6.73□□□□□ -1.33
SLIRP-203ENST00000554074 KRT3P12035 628 aa6.73□□□□□ -1.33
SLIRP-203ENST00000554074 ADRB3P13945 408 aa6.73□□□□□ -1.33
SLIRP-203ENST00000554074 PRLRP16471 622 aa6.73□□□□□ -1.33
SLIRP-203ENST00000554074 GPD1P21695 349 aa6.73□□□□□ -1.33
SLIRP-203ENST00000554074 GLDCP23378 1020 aa6.73□□□□□ -1.33
SLIRP-203ENST00000554074 KLK7P49862 253 aa6.73□□□□□ -1.33
SLIRP-203ENST00000554074 CCNHP51946 323 aaPredicted RBP6.73□□□□□ -1.33
SLIRP-203ENST00000554074 COPB1P53618 953 aaKnown RBP6.73□□□□□ -1.33
SLIRP-203ENST00000554074 AIF1P55008 147 aa6.73□□□□□ -1.33
SLIRP-203ENST00000554074 HDAC4P56524 1084 aa6.73□□□□□ -1.33
SLIRP-203ENST00000554074 ATP11AP98196 1134 aa6.73□□□□□ -1.33
SLIRP-203ENST00000554074 E2F1Q01094 437 aa6.73□□□□□ -1.33
SLIRP-203ENST00000554074 MYL5Q02045 173 aa6.73□□□□□ -1.33
SLIRP-203ENST00000554074 TYRO3Q06418 890 aa6.73□□□□□ -1.33
SLIRP-203ENST00000554074 BNIP3Q12983 259 aa6.73□□□□□ -1.33
SLIRP-203ENST00000554074 RTP5Q14D33 572 aa6.73□□□□□ -1.33
SLIRP-203ENST00000554074 CLEC16AQ2KHT3 1053 aa6.73□□□□□ -1.33
SLIRP-203ENST00000554074 C15orf59Q2T9L4 293 aaPredicted RBP6.73□□□□□ -1.33
SLIRP-203ENST00000554074 ARSIQ5FYB1 569 aa6.73□□□□□ -1.33
SLIRP-203ENST00000554074 PPP1R2P3Q6NXS1 205 aa6.73□□□□□ -1.33
SLIRP-203ENST00000554074 FBXL19Q6PCT2 694 aa6.73□□□□□ -1.33
SLIRP-203ENST00000554074 KYAT3Q6YP21 454 aaKnown RBP6.73□□□□□ -1.33
SLIRP-203ENST00000554074 GCNT7Q6ZNI0 430 aa6.73□□□□□ -1.33
SLIRP-203ENST00000554074 DRC7Q8IY82 874 aa6.73□□□□□ -1.33
SLIRP-203ENST00000554074 NEK11Q8NG66 645 aa6.73□□□□□ -1.33
SLIRP-203ENST00000554074 OR4C6Q8NH72 309 aa6.73□□□□□ -1.33
SLIRP-203ENST00000554074 JOSD2Q8TAC2 188 aa6.73□□□□□ -1.33
SLIRP-203ENST00000554074 MDM1Q8TC05 714 aa6.73□□□□□ -1.33
SLIRP-203ENST00000554074 GRIN3AQ8TCU5 1115 aa6.73□□□□□ -1.33
SLIRP-203ENST00000554074 CASKIN2Q8WXE0 1202 aa6.73□□□□□ -1.33
SLIRP-203ENST00000554074 ARHGEF2Q92974 986 aaKnown RBP6.73□□□□□ -1.33
SLIRP-203ENST00000554074 TBC1D31Q96DN5 1066 aa6.73□□□□□ -1.33
SLIRP-203ENST00000554074 ARHGEF26Q96DR7 871 aa6.73□□□□□ -1.33
SLIRP-203ENST00000554074 FEM1CQ96JP0 617 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms