RNA–Protein interactions for RNA: ENST00000554018.1

TRAPPC6B-204, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 4

Gene TRAPPC6B, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-204ENST00000554018 HDAC8Q9BY41 377 aa12.13□□□□□ -0.47
TRAPPC6B-204ENST00000554018 CEP44Q9C0F1 390 aa12.13□□□□□ -0.47
TRAPPC6B-204ENST00000554018 DYRK4Q9NR20 520 aa12.13□□□□□ -0.47
TRAPPC6B-204ENST00000554018 FTSJ1Q9UET6 329 aa12.13□□□□□ -0.47
TRAPPC6B-204ENST00000554018 NEU3Q9UQ49 428 aa12.13□□□□□ -0.47
TRAPPC6B-204ENST00000554018 DMTF1Q9Y222 760 aa12.13□□□□□ -0.47
TRAPPC6B-204ENST00000554018 TCRBV5S1A1TA0A578 114 aa12.12□□□□□ -0.47
TRAPPC6B-204ENST00000554018 PRAMEF26H0Y7S4 382 aa12.12□□□□□ -0.47
TRAPPC6B-204ENST00000554018 CCP110O43303 1012 aa12.12□□□□□ -0.47
TRAPPC6B-204ENST00000554018 PCDH8O95206 1070 aa12.12□□□□□ -0.47
TRAPPC6B-204ENST00000554018 ITGAVP06756 1048 aa12.12□□□□□ -0.47
TRAPPC6B-204ENST00000554018 FERP16591 822 aa12.12□□□□□ -0.47
TRAPPC6B-204ENST00000554018 MAPKAPK2P49137 400 aa12.12□□□□□ -0.47
TRAPPC6B-204ENST00000554018 ARRB1P49407 418 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC6B-204ENST00000554018 CCNHP51946 323 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC6B-204ENST00000554018 ZNF143P52747 638 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC6B-204ENST00000554018 RPL7AP62424 266 aaKnown RBP12.12□□□□□ -0.47
TRAPPC6B-204ENST00000554018 C1QBPQ07021 282 aaKnown RBP12.12□□□□□ -0.47
TRAPPC6B-204ENST00000554018 CCDC15Q0P6D6 951 aa12.12□□□□□ -0.47
TRAPPC6B-204ENST00000554018 SCAPQ12770 1279 aa12.12□□□□□ -0.47
TRAPPC6B-204ENST00000554018 BNIP3Q12983 259 aa12.12□□□□□ -0.47
TRAPPC6B-204ENST00000554018 STAT4Q14765 748 aa12.12□□□□□ -0.47
TRAPPC6B-204ENST00000554018 INAVAQ3KP66 663 aa12.12□□□□□ -0.47
TRAPPC6B-204ENST00000554018 CARD16Q5EG05 197 aa12.12□□□□□ -0.47
TRAPPC6B-204ENST00000554018 DNAJC24Q6P3W2 148 aa12.12□□□□□ -0.47
TRAPPC6B-204ENST00000554018 LEKR1Q6ZMV7 388 aa12.12□□□□□ -0.47
TRAPPC6B-204ENST00000554018 IRF2BP2Q7Z5L9 587 aa12.12□□□□□ -0.47
TRAPPC6B-204ENST00000554018 SLFN11Q7Z7L1 901 aa12.12□□□□□ -0.47
TRAPPC6B-204ENST00000554018 IQCHQ86VS3 1027 aa12.12□□□□□ -0.47
TRAPPC6B-204ENST00000554018 HORMAD1Q86X24 394 aa12.12□□□□□ -0.47
TRAPPC6B-204ENST00000554018 PYROXD2Q8N2H3 581 aa12.12□□□□□ -0.47
TRAPPC6B-204ENST00000554018 EID2Q8N6I1 236 aa12.12□□□□□ -0.47
TRAPPC6B-204ENST00000554018 PCDH20Q8N6Y1 951 aaKnown RBP12.12□□□□□ -0.47
TRAPPC6B-204ENST00000554018 NTAN1Q96AB6 310 aa12.12□□□□□ -0.47
TRAPPC6B-204ENST00000554018 TBC1D31Q96DN5 1066 aa12.12□□□□□ -0.47
TRAPPC6B-204ENST00000554018 NAT10Q9H0A0 1025 aaKnown RBP12.12□□□□□ -0.47
TRAPPC6B-204ENST00000554018 ERVMER34-1Q9H9K5 563 aa12.12□□□□□ -0.47
TRAPPC6B-204ENST00000554018 TMEM248Q9NWD8 314 aa12.12□□□□□ -0.47
TRAPPC6B-204ENST00000554018 TAS2R14Q9NYV8 317 aa12.12□□□□□ -0.47
TRAPPC6B-204ENST00000554018 HECAQ9UBI9 543 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC6B-204ENST00000554018 ASXL3Q9C0F0 2248 aa12.12□□□□□ -0.47
TRAPPC6B-204ENST00000554018 ATRXP46100 2492 aa12.11□□□□□ -0.47
TRAPPC6B-204ENST00000554018 SRRM3A6NNA2 597 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC6B-204ENST00000554018 YKT6O15498 198 aa12.11□□□□□ -0.47
TRAPPC6B-204ENST00000554018 CAPNS1P04632 268 aa12.11□□□□□ -0.47
TRAPPC6B-204ENST00000554018 EPHA8P29322 1005 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC6B-204ENST00000554018 GKP32189 559 aa12.11□□□□□ -0.47
TRAPPC6B-204ENST00000554018 ETFBP38117 255 aa12.11□□□□□ -0.47
TRAPPC6B-204ENST00000554018 RXRGP48443 463 aa12.11□□□□□ -0.47
TRAPPC6B-204ENST00000554018 POLD3Q15054 466 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC6B-204ENST00000554018 PPP1R15BQ5SWA1 713 aa12.11□□□□□ -0.47
TRAPPC6B-204ENST00000554018 SEL1L3Q68CR1 1132 aa12.11□□□□□ -0.47
TRAPPC6B-204ENST00000554018 ACAD10Q6JQN1 1059 aa12.11□□□□□ -0.47
TRAPPC6B-204ENST00000554018 NEK5Q6P3R8 708 aa12.11□□□□□ -0.47
TRAPPC6B-204ENST00000554018 SCYL2Q6P3W7 929 aa12.11□□□□□ -0.47
TRAPPC6B-204ENST00000554018 TMPRSS7Q7RTY8 843 aa12.11□□□□□ -0.47
TRAPPC6B-204ENST00000554018 MCOLN2Q8IZK6 566 aa12.11□□□□□ -0.47
TRAPPC6B-204ENST00000554018 RYBPQ8N488 228 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC6B-204ENST00000554018 TMEM145Q8NBT3 493 aa12.11□□□□□ -0.47
TRAPPC6B-204ENST00000554018 OR6K2Q8NGY2 324 aa12.11□□□□□ -0.47
TRAPPC6B-204ENST00000554018 BAP1Q92560 729 aa12.11□□□□□ -0.47
TRAPPC6B-204ENST00000554018 KLHDC7BQ96G42 594 aa12.11□□□□□ -0.47
TRAPPC6B-204ENST00000554018 PPP1R16AQ96I34 528 aa12.11□□□□□ -0.47
TRAPPC6B-204ENST00000554018 MCEEQ96PE7 176 aa12.11□□□□□ -0.47
TRAPPC6B-204ENST00000554018 BPIFA3Q9BQP9 254 aa12.11□□□□□ -0.47
TRAPPC6B-204ENST00000554018 HEPHQ9BQS7 1158 aa12.11□□□□□ -0.47
TRAPPC6B-204ENST00000554018 TM6SF2Q9BZW4 377 aa12.11□□□□□ -0.47
TRAPPC6B-204ENST00000554018 MAGEH1Q9H213 219 aa12.11□□□□□ -0.47
TRAPPC6B-204ENST00000554018 RETREG1Q9H6L5 497 aa12.11□□□□□ -0.47
TRAPPC6B-204ENST00000554018 ZDHHC6Q9H6R6 413 aa12.11□□□□□ -0.47
TRAPPC6B-204ENST00000554018 FZD3Q9NPG1 666 aa12.11□□□□□ -0.47
TRAPPC6B-204ENST00000554018 RTN4Q9NQC3 1192 aaKnown RBP12.11□□□□□ -0.47
TRAPPC6B-204ENST00000554018 RALYQ9UKM9 306 aaKnown RBP12.11□□□□□ -0.47
TRAPPC6B-204ENST00000554018 ZFR2Q9UPR6 939 aaKnown RBP12.11□□□□□ -0.47
TRAPPC6B-204ENST00000554018 LOC400499M0QZD8 3231 aa12.11□□□□□ -0.47
TRAPPC6B-204ENST00000554018 FAM149AA5PLN7 773 aa12.1□□□□□ -0.47
TRAPPC6B-204ENST00000554018 ANKRD62A6NC57 917 aa12.1□□□□□ -0.47
TRAPPC6B-204ENST00000554018 TMCO5BA8MYB1 307 aa12.1□□□□□ -0.47
TRAPPC6B-204ENST00000554018 TAF4O00268 1085 aa12.1□□□□□ -0.47
TRAPPC6B-204ENST00000554018 ENC1O14682 589 aa12.1□□□□□ -0.47
TRAPPC6B-204ENST00000554018 RAMP2O60895 175 aa12.1□□□□□ -0.47
TRAPPC6B-204ENST00000554018 LDOC1O95751 146 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC6B-204ENST00000554018 CCDC172P0C7W6 258 aa12.1□□□□□ -0.47
TRAPPC6B-204ENST00000554018 THEGLP0DJG4 465 aa12.1□□□□□ -0.47
TRAPPC6B-204ENST00000554018 ADRB3P13945 408 aa12.1□□□□□ -0.47
TRAPPC6B-204ENST00000554018 TNFAIP3P21580 790 aa12.1□□□□□ -0.47
TRAPPC6B-204ENST00000554018 ITGB7P26010 798 aa12.1□□□□□ -0.47
TRAPPC6B-204ENST00000554018 L1CAMP32004 1257 aa12.1□□□□□ -0.47
TRAPPC6B-204ENST00000554018 NEK3P51956 506 aa12.1□□□□□ -0.47
TRAPPC6B-204ENST00000554018 CLDN2P57739 230 aa12.1□□□□□ -0.47
TRAPPC6B-204ENST00000554018 OVGP1Q12889 678 aa12.1□□□□□ -0.47
TRAPPC6B-204ENST00000554018 DNAJC3Q13217 504 aa12.1□□□□□ -0.47
TRAPPC6B-204ENST00000554018 TMEM259Q4ZIN3 620 aa12.1□□□□□ -0.47
TRAPPC6B-204ENST00000554018 EFHC2Q5JST6 749 aa12.1□□□□□ -0.47
TRAPPC6B-204ENST00000554018 FBXL19Q6PCT2 694 aa12.1□□□□□ -0.47
TRAPPC6B-204ENST00000554018 DCUN1D2Q6PH85 259 aa12.1□□□□□ -0.47
TRAPPC6B-204ENST00000554018 DHRS13Q6UX07 377 aa12.1□□□□□ -0.47
TRAPPC6B-204ENST00000554018 PARS2Q7L3T8 475 aaKnown RBP12.1□□□□□ -0.47
TRAPPC6B-204ENST00000554018 KANSL1Q7Z3B3 1105 aa12.1□□□□□ -0.47
TRAPPC6B-204ENST00000554018 OXR1Q8N573 874 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms