RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 EIF4A3P38919 411 aaKnown RBP7.93□□□□□ -1.14
ABCD4-220ENST00000553998 VASPP50552 380 aaPredicted RBP7.93□□□□□ -1.14
ABCD4-220ENST00000553998 PPP2CBP62714 309 aa7.93□□□□□ -1.14
ABCD4-220ENST00000553998 YWHAZP63104 245 aaKnown RBP7.93□□□□□ -1.14
ABCD4-220ENST00000553998 PPP2CAP67775 309 aa7.93□□□□□ -1.14
ABCD4-220ENST00000553998 SLC6A3Q01959 620 aa7.93□□□□□ -1.14
ABCD4-220ENST00000553998 PTP4A2Q12974 167 aa7.93□□□□□ -1.14
ABCD4-220ENST00000553998 STAT4Q14765 748 aa7.93□□□□□ -1.14
ABCD4-220ENST00000553998 SLC18A3Q16572 532 aa7.93□□□□□ -1.14
ABCD4-220ENST00000553998 ASTE1Q2TB18 679 aaPredicted RBP7.93□□□□□ -1.14
ABCD4-220ENST00000553998 ARL13BQ3SXY8 428 aa7.93□□□□□ -1.14
ABCD4-220ENST00000553998 NUGGCQ68CJ6 796 aa7.93□□□□□ -1.14
ABCD4-220ENST00000553998 TBC1D3GQ6DHY5 549 aa7.93□□□□□ -1.14
ABCD4-220ENST00000553998 OR6B2Q6IFH4 312 aa7.93□□□□□ -1.14
ABCD4-220ENST00000553998 TBC1D3CQ6IPX1 549 aa7.93□□□□□ -1.14
ABCD4-220ENST00000553998 ALKBH5Q6P6C2 394 aaKnown RBP7.93□□□□□ -1.14
ABCD4-220ENST00000553998 MMS22LQ6ZRQ5 1243 aa7.93□□□□□ -1.14
ABCD4-220ENST00000553998 MON1BQ7L1V2 547 aa7.93□□□□□ -1.14
ABCD4-220ENST00000553998 XYLT1Q86Y38 959 aa7.93□□□□□ -1.14
ABCD4-220ENST00000553998 TMTC1Q8IUR5 882 aa7.93□□□□□ -1.14
ABCD4-220ENST00000553998 MFN1Q8IWA4 741 aa7.93□□□□□ -1.14
ABCD4-220ENST00000553998 UNC45BQ8IWX7 931 aa7.93□□□□□ -1.14
ABCD4-220ENST00000553998 CCDC170Q8IYT3 715 aa7.93□□□□□ -1.14
ABCD4-220ENST00000553998 MCOLN2Q8IZK6 566 aa7.93□□□□□ -1.14
ABCD4-220ENST00000553998 TBC1D3Q8IZP1 549 aaPredicted RBP7.93□□□□□ -1.14
ABCD4-220ENST00000553998 TMEM145Q8NBT3 493 aa7.93□□□□□ -1.14
ABCD4-220ENST00000553998 RNF139Q8WU17 664 aa7.93□□□□□ -1.14
ABCD4-220ENST00000553998 NDRG1Q92597 394 aaKnown RBP7.93□□□□□ -1.14
ABCD4-220ENST00000553998 FAM149B1Q96BN6 582 aa7.93□□□□□ -1.14
ABCD4-220ENST00000553998 CCDC97Q96F63 343 aaPredicted RBP7.93□□□□□ -1.14
ABCD4-220ENST00000553998 IFT43Q96FT9 208 aa7.93□□□□□ -1.14
ABCD4-220ENST00000553998 CCDC42Q96M95 316 aa7.93□□□□□ -1.14
ABCD4-220ENST00000553998 SLC2A13Q96QE2 648 aa7.93□□□□□ -1.14
ABCD4-220ENST00000553998 C11orf70Q9BRQ4 267 aa7.93□□□□□ -1.14
ABCD4-220ENST00000553998 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.93□□□□□ -1.14
ABCD4-220ENST00000553998 ISCUQ9H1K1 167 aa7.93□□□□□ -1.14
ABCD4-220ENST00000553998 DEF6Q9H4E7 631 aa7.93□□□□□ -1.14
ABCD4-220ENST00000553998 POPDC2Q9HBU9 364 aa7.93□□□□□ -1.14
ABCD4-220ENST00000553998 ADAM22Q9P0K1 906 aa7.93□□□□□ -1.14
ABCD4-220ENST00000553998 SFMBT1Q9UHJ3 866 aa7.93□□□□□ -1.14
ABCD4-220ENST00000553998 SLCO3A1Q9UIG8 710 aa7.93□□□□□ -1.14
ABCD4-220ENST00000553998 PCDHGA8Q9Y5G5 932 aa7.93□□□□□ -1.14
ABCD4-220ENST00000553998 U3KQA8 63 aa7.93□□□□□ -1.14
ABCD4-220ENST00000553998 RELNP78509 3460 aa7.93□□□□□ -1.14
ABCD4-220ENST00000553998 PTPN13Q12923 2485 aa7.93□□□□□ -1.14
ABCD4-220ENST00000553998 A0A087X0T9 212 aa7.92□□□□□ -1.14
ABCD4-220ENST00000553998 A0A1B0GVM2 712 aa7.92□□□□□ -1.14
ABCD4-220ENST00000553998 CDRT15L2A8MXV6 281 aa7.92□□□□□ -1.14
ABCD4-220ENST00000553998 PRAMEF26H0Y7S4 382 aa7.92□□□□□ -1.14
ABCD4-220ENST00000553998 PYCARD-AS1I3L0S3 204 aa7.92□□□□□ -1.14
ABCD4-220ENST00000553998 AKR1B10O60218 316 aa7.92□□□□□ -1.14
ABCD4-220ENST00000553998 CSO75390 466 aaKnown RBP7.92□□□□□ -1.14
ABCD4-220ENST00000553998 DAB1O75553 588 aa7.92□□□□□ -1.14
ABCD4-220ENST00000553998 FTLP02792 175 aaPredicted RBP7.92□□□□□ -1.14
ABCD4-220ENST00000553998 PLEKP08567 350 aaPredicted RBP7.92□□□□□ -1.14
ABCD4-220ENST00000553998 FAM228BP0C875 321 aa7.92□□□□□ -1.14
ABCD4-220ENST00000553998 MZF1P28698 734 aaPredicted RBP7.92□□□□□ -1.14
ABCD4-220ENST00000553998 CYLC1P35663 651 aaPredicted RBP7.92□□□□□ -1.14
ABCD4-220ENST00000553998 MLLT3P42568 568 aaPredicted RBP7.92□□□□□ -1.14
ABCD4-220ENST00000553998 SLC11A2P49281 568 aa7.92□□□□□ -1.14
ABCD4-220ENST00000553998 DUSP3P51452 185 aaPredicted RBP7.92□□□□□ -1.14
ABCD4-220ENST00000553998 ECT2LQ008S8 904 aa7.92□□□□□ -1.14
ABCD4-220ENST00000553998 NNTQ13423 1086 aa7.92□□□□□ -1.14
ABCD4-220ENST00000553998 ELAVL3Q14576 367 aaKnown RBP7.92□□□□□ -1.14
ABCD4-220ENST00000553998 ISXQ2M1V0 245 aa7.92□□□□□ -1.14
ABCD4-220ENST00000553998 FSCBQ5H9T9 825 aa7.92□□□□□ -1.14
ABCD4-220ENST00000553998 PITRM1Q5JRX3 1037 aa7.92□□□□□ -1.14
ABCD4-220ENST00000553998 COLEC12Q5KU26 742 aa7.92□□□□□ -1.14
ABCD4-220ENST00000553998 NADSYN1Q6IA69 706 aa7.92□□□□□ -1.14
ABCD4-220ENST00000553998 RFWD3Q6PCD5 774 aa7.92□□□□□ -1.14
ABCD4-220ENST00000553998 FAM183BPQ6ZVS7 135 aa7.92□□□□□ -1.14
ABCD4-220ENST00000553998 CLEC14AQ86T13 490 aa7.92□□□□□ -1.14
ABCD4-220ENST00000553998 STK40Q8N2I9 435 aa7.92□□□□□ -1.14
ABCD4-220ENST00000553998 EXD3Q8N9H8 876 aa7.92□□□□□ -1.14
ABCD4-220ENST00000553998 SPC24Q8NBT2 197 aa7.92□□□□□ -1.14
ABCD4-220ENST00000553998 HJURPQ8NCD3 748 aaPredicted RBP7.92□□□□□ -1.14
ABCD4-220ENST00000553998 C3orf20Q8ND61 904 aa7.92□□□□□ -1.14
ABCD4-220ENST00000553998 MYEOVQ96EZ4 313 aa7.92□□□□□ -1.14
ABCD4-220ENST00000553998 KLHDC7BQ96G42 594 aa7.92□□□□□ -1.14
ABCD4-220ENST00000553998 PRICKLE1Q96MT3 831 aaPredicted RBP7.92□□□□□ -1.14
ABCD4-220ENST00000553998 SERPINB11Q96P15 392 aa7.92□□□□□ -1.14
ABCD4-220ENST00000553998 CHP1Q99653 195 aa7.92□□□□□ -1.14
ABCD4-220ENST00000553998 NHEJ1Q9H9Q4 299 aaPredicted RBP7.92□□□□□ -1.14
ABCD4-220ENST00000553998 STARD5Q9NSY2 213 aa7.92□□□□□ -1.14
ABCD4-220ENST00000553998 UCKL1Q9NWZ5 548 aa7.92□□□□□ -1.14
ABCD4-220ENST00000553998 RRN3Q9NYV6 651 aa7.92□□□□□ -1.14
ABCD4-220ENST00000553998 TAS2R14Q9NYV8 317 aa7.92□□□□□ -1.14
ABCD4-220ENST00000553998 NLGN3Q9NZ94 848 aa7.92□□□□□ -1.14
ABCD4-220ENST00000553998 NENFQ9UMX5 172 aa7.92□□□□□ -1.14
ABCD4-220ENST00000553998 ARID1BQ8NFD5 2236 aaPredicted RBP7.91□□□□□ -1.14
ABCD4-220ENST00000553998 TCRBV5S1A1TA0A578 114 aa7.91□□□□□ -1.14
ABCD4-220ENST00000553998 ANKRD62A6NC57 917 aa7.91□□□□□ -1.14
ABCD4-220ENST00000553998 SIGLEC16A6NMB1 481 aa7.91□□□□□ -1.14
ABCD4-220ENST00000553998 PIK3R2O00459 728 aa7.91□□□□□ -1.14
ABCD4-220ENST00000553998 SCAMP1O15126 338 aa7.91□□□□□ -1.14
ABCD4-220ENST00000553998 EFSO43281 561 aa7.91□□□□□ -1.14
ABCD4-220ENST00000553998 MSI1O43347 362 aaKnown RBP7.91□□□□□ -1.14
ABCD4-220ENST00000553998 SDC3O75056 442 aa7.91□□□□□ -1.14
ABCD4-220ENST00000553998 NTRK1P04629 796 aa7.91□□□□□ -1.14
ABCD4-220ENST00000553998 FYNP06241 537 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms