RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 UNC45AQ9H3U1 944 aa2.52□□□□□ -2.01
SRP54-204ENST00000553923 CATSPERBQ9H7T0 1116 aa2.52□□□□□ -2.01
SRP54-204ENST00000553923 PLEKHA5Q9HAU0 1116 aa2.52□□□□□ -2.01
SRP54-204ENST00000553923 OBP2BQ9NPH6 170 aa2.52□□□□□ -2.01
SRP54-204ENST00000553923 HELLSQ9NRZ9 838 aa2.52□□□□□ -2.01
SRP54-204ENST00000553923 RASSF1Q9NS23 344 aa2.52□□□□□ -2.01
SRP54-204ENST00000553923 RNF146Q9NTX7 359 aa2.52□□□□□ -2.01
SRP54-204ENST00000553923 PDP2Q9P2J9 529 aa2.52□□□□□ -2.01
SRP54-204ENST00000553923 PGAP2Q9UHJ9 254 aa2.52□□□□□ -2.01
SRP54-204ENST00000553923 ADAM18Q9Y3Q7 739 aa2.52□□□□□ -2.01
SRP54-204ENST00000553923 COL2A1P02458 1487 aaPredicted RBP2.52□□□□□ -2.01
SRP54-204ENST00000553923 ITIH6Q6UXX5 1313 aa2.51□□□□□ -2.01
SRP54-204ENST00000553923 IGLV5-52A0A0A0MRZ9 124 aa2.51□□□□□ -2.01
SRP54-204ENST00000553923 TRBV5-7A0A0A0MS05 114 aa2.51□□□□□ -2.01
SRP54-204ENST00000553923 A0A1W2PRQ8 180 aa2.51□□□□□ -2.01
SRP54-204ENST00000553923 GXYLT2A0PJZ3 443 aa2.51□□□□□ -2.01
SRP54-204ENST00000553923 ANKRD18BA2A2Z9 1011 aa2.51□□□□□ -2.01
SRP54-204ENST00000553923 SYNDIG1LA6NDD5 238 aa2.51□□□□□ -2.01
SRP54-204ENST00000553923 A6NLC8 198 aa2.51□□□□□ -2.01
SRP54-204ENST00000553923 CLCA1A8K7I4 914 aa2.51□□□□□ -2.01
SRP54-204ENST00000553923 LGALS16A8MUM7 142 aa2.51□□□□□ -2.01
SRP54-204ENST00000553923 KCNJ18B7U540 433 aa2.51□□□□□ -2.01
SRP54-204ENST00000553923 MS4A18H0YCH9 400 aa2.51□□□□□ -2.01
SRP54-204ENST00000553923 K7ENM7 598 aa2.51□□□□□ -2.01
SRP54-204ENST00000553923 TMCC2O75069 709 aa2.51□□□□□ -2.01
SRP54-204ENST00000553923 FGF18O76093 207 aa2.51□□□□□ -2.01
SRP54-204ENST00000553923 TBX18O95935 607 aa2.51□□□□□ -2.01
SRP54-204ENST00000553923 VDRP11473 427 aa2.51□□□□□ -2.01
SRP54-204ENST00000553923 MYL4P12829 197 aa2.51□□□□□ -2.01
SRP54-204ENST00000553923 GM2AP17900 193 aa2.51□□□□□ -2.01
SRP54-204ENST00000553923 IGFBP2P18065 325 aa2.51□□□□□ -2.01
SRP54-204ENST00000553923 GNLYP22749 145 aa2.51□□□□□ -2.01
SRP54-204ENST00000553923 EEF1GP26641 437 aaKnown RBP2.51□□□□□ -2.01
SRP54-204ENST00000553923 KRT2P35908 639 aa2.51□□□□□ -2.01
SRP54-204ENST00000553923 SLC16A2P36021 539 aa2.51□□□□□ -2.01
SRP54-204ENST00000553923 LIFRP42702 1097 aa2.51□□□□□ -2.01
SRP54-204ENST00000553923 RXRGP48443 463 aa2.51□□□□□ -2.01
SRP54-204ENST00000553923 SHC2P98077 582 aa2.51□□□□□ -2.01
SRP54-204ENST00000553923 ARL16Q0P5N6 197 aa2.51□□□□□ -2.01
SRP54-204ENST00000553923 PRKG2Q13237 762 aa2.51□□□□□ -2.01
SRP54-204ENST00000553923 ATP1A4Q13733 1029 aa2.51□□□□□ -2.01
SRP54-204ENST00000553923 CBFBQ13951 182 aa2.51□□□□□ -2.01
SRP54-204ENST00000553923 CCDC6Q16204 474 aa2.51□□□□□ -2.01
SRP54-204ENST00000553923 CCNG2Q16589 344 aa2.51□□□□□ -2.01
SRP54-204ENST00000553923 MPEG1Q2M385 716 aa2.51□□□□□ -2.01
SRP54-204ENST00000553923 SLC45A4Q5BKX6 768 aa2.51□□□□□ -2.01
SRP54-204ENST00000553923 FAM133BQ5BKY9 247 aaKnown RBP2.51□□□□□ -2.01
SRP54-204ENST00000553923 GPATCH4Q5T3I0 446 aaKnown RBP2.51□□□□□ -2.01
SRP54-204ENST00000553923 C1QTNF12Q5T7M4 302 aa2.51□□□□□ -2.01
SRP54-204ENST00000553923 MFSD4BQ5TF39 518 aa2.51□□□□□ -2.01
SRP54-204ENST00000553923 C16orf54Q6UWD8 224 aa2.51□□□□□ -2.01
SRP54-204ENST00000553923 BEND5Q7L4P6 421 aa2.51□□□□□ -2.01
SRP54-204ENST00000553923 GET4Q7L5D6 327 aaPredicted RBP2.51□□□□□ -2.01
SRP54-204ENST00000553923 FASTKD5Q7L8L6 764 aaKnown RBP2.51□□□□□ -2.01
SRP54-204ENST00000553923 C2CD5Q86YS7 1000 aa2.51□□□□□ -2.01
SRP54-204ENST00000553923 CCDC28AQ8IWP9 274 aa2.51□□□□□ -2.01
SRP54-204ENST00000553923 FAM217AQ8IXS0 508 aa2.51□□□□□ -2.01
SRP54-204ENST00000553923 CACNA2D3Q8IZS8 1091 aa2.51□□□□□ -2.01
SRP54-204ENST00000553923 TCP11L2Q8N4U5 519 aa2.51□□□□□ -2.01
SRP54-204ENST00000553923 SLC25A41Q8N5S1 370 aa2.51□□□□□ -2.01
SRP54-204ENST00000553923 BICD2Q8TD16 824 aa2.51□□□□□ -2.01
SRP54-204ENST00000553923 IPO4Q8TEX9 1081 aaKnown RBP2.51□□□□□ -2.01
SRP54-204ENST00000553923 SNRNP27Q8WVK2 155 aaKnown RBP2.51□□□□□ -2.01
SRP54-204ENST00000553923 NPIPB3Q92617 1050 aa2.51□□□□□ -2.01
SRP54-204ENST00000553923 C18orf8Q96DM3 657 aa2.51□□□□□ -2.01
SRP54-204ENST00000553923 APOLD1Q96LR9 279 aa2.51□□□□□ -2.01
SRP54-204ENST00000553923 NUDT22Q9BRQ3 303 aa2.51□□□□□ -2.01
SRP54-204ENST00000553923 TMEM120AQ9BXJ8 343 aa2.51□□□□□ -2.01
SRP54-204ENST00000553923 GAREM1Q9H706 876 aa2.51□□□□□ -2.01
SRP54-204ENST00000553923 PRKRIP1Q9H875 184 aaPredicted RBP2.51□□□□□ -2.01
SRP54-204ENST00000553923 ZNF304Q9HCX3 659 aa2.51□□□□□ -2.01
SRP54-204ENST00000553923 KCNK9Q9NPC2 374 aa2.51□□□□□ -2.01
SRP54-204ENST00000553923 UBN1Q9NPG3 1134 aa2.51□□□□□ -2.01
SRP54-204ENST00000553923 TBC1D22BQ9NU19 505 aa2.51□□□□□ -2.01
SRP54-204ENST00000553923 MRGBPQ9NV56 204 aa2.51□□□□□ -2.01
SRP54-204ENST00000553923 GGA3Q9NZ52 723 aa2.51□□□□□ -2.01
SRP54-204ENST00000553923 AASSQ9UDR5 926 aa2.51□□□□□ -2.01
SRP54-204ENST00000553923 SLC39A10Q9ULF5 831 aa2.51□□□□□ -2.01
SRP54-204ENST00000553923 ZMYND8Q9ULU4 1186 aaPredicted RBP2.51□□□□□ -2.01
SRP54-204ENST00000553923 MAGED1Q9Y5V3 778 aaPredicted RBP2.51□□□□□ -2.01
SRP54-204ENST00000553923 TP53BP1Q12888 1972 aaPredicted RBP2.5□□□□□ -2.01
SRP54-204ENST00000553923 FSD2A1L4K1 749 aa2.5□□□□□ -2.01
SRP54-204ENST00000553923 HMX3A6NHT5 357 aa2.5□□□□□ -2.01
SRP54-204ENST00000553923 AQP12BA6NM10 295 aa2.5□□□□□ -2.01
SRP54-204ENST00000553923 B4DLN1 442 aa2.5□□□□□ -2.01
SRP54-204ENST00000553923 VWA5AO00534 786 aa2.5□□□□□ -2.01
SRP54-204ENST00000553923 ACKR2O00590 384 aa2.5□□□□□ -2.01
SRP54-204ENST00000553923 LIASO43766 372 aa2.5□□□□□ -2.01
SRP54-204ENST00000553923 CFC1BP0CG36 223 aa2.5□□□□□ -2.01
SRP54-204ENST00000553923 CFC1P0CG37 223 aa2.5□□□□□ -2.01
SRP54-204ENST00000553923 CKMT1AP12532 417 aa2.5□□□□□ -2.01
SRP54-204ENST00000553923 FGFR2P21802 821 aa2.5□□□□□ -2.01
SRP54-204ENST00000553923 HOXC13P31276 330 aa2.5□□□□□ -2.01
SRP54-204ENST00000553923 TNFSF8P32971 234 aa2.5□□□□□ -2.01
SRP54-204ENST00000553923 AMTP48728 403 aa2.5□□□□□ -2.01
SRP54-204ENST00000553923 NAP1L1P55209 391 aaKnown RBP2.5□□□□□ -2.01
SRP54-204ENST00000553923 ARL4CP56559 192 aa2.5□□□□□ -2.01
SRP54-204ENST00000553923 ZBED6P86452 979 aa2.5□□□□□ -2.01
SRP54-204ENST00000553923 GALNT1Q10472 559 aaPredicted RBP2.5□□□□□ -2.01
SRP54-204ENST00000553923 KRT32Q14532 448 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms