RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 ADORA2A-AS1P86434 159 aa3.53□□□□□ -1.84
VRK1-202ENST00000553683 LTBQ06643 244 aa3.53□□□□□ -1.84
VRK1-202ENST00000553683 ST3GAL1Q11201 340 aa3.53□□□□□ -1.84
VRK1-202ENST00000553683 PPFIA1Q13136 1202 aa3.53□□□□□ -1.84
VRK1-202ENST00000553683 TDRD12Q587J7 1177 aaKnown RBP3.53□□□□□ -1.84
VRK1-202ENST00000553683 FNBP1LQ5T0N5 605 aa3.53□□□□□ -1.84
VRK1-202ENST00000553683 FAM83HQ6ZRV2 1179 aaPredicted RBP3.53□□□□□ -1.84
VRK1-202ENST00000553683 CTU1Q7Z7A3 348 aaKnown RBP3.53□□□□□ -1.84
VRK1-202ENST00000553683 TRIM74Q86UV6 250 aa3.53□□□□□ -1.84
VRK1-202ENST00000553683 TRIM73Q86UV7 250 aa3.53□□□□□ -1.84
VRK1-202ENST00000553683 SPATA2LQ8IUW3 424 aaPredicted RBP3.53□□□□□ -1.84
VRK1-202ENST00000553683 HORMAD2Q8N7B1 307 aa3.53□□□□□ -1.84
VRK1-202ENST00000553683 SETD9Q8NE22 299 aa3.53□□□□□ -1.84
VRK1-202ENST00000553683 MCPH1Q8NEM0 835 aa3.53□□□□□ -1.84
VRK1-202ENST00000553683 OR4N2Q8NGD1 307 aa3.53□□□□□ -1.84
VRK1-202ENST00000553683 CEP76Q8TAP6 659 aa3.53□□□□□ -1.84
VRK1-202ENST00000553683 ASB5Q8WWX0 329 aa3.53□□□□□ -1.84
VRK1-202ENST00000553683 FAM84BQ96KN1 310 aaPredicted RBP3.53□□□□□ -1.84
VRK1-202ENST00000553683 GFM1Q96RP9 751 aaKnown RBP3.53□□□□□ -1.84
VRK1-202ENST00000553683 TTC12Q9H892 705 aaPredicted RBP3.53□□□□□ -1.84
VRK1-202ENST00000553683 PTPRHQ9HD43 1115 aa3.53□□□□□ -1.84
VRK1-202ENST00000553683 CDH22Q9UJ99 828 aa3.53□□□□□ -1.84
VRK1-202ENST00000553683 SLC45A1Q9Y2W3 748 aa3.53□□□□□ -1.84
VRK1-202ENST00000553683 I6L893 689 aaPredicted RBP3.52□□□□□ -1.85
VRK1-202ENST00000553683 ACOT8O14734 319 aa3.52□□□□□ -1.85
VRK1-202ENST00000553683 ANP32CO43423 234 aa3.52□□□□□ -1.85
VRK1-202ENST00000553683 CHRM4P08173 479 aa3.52□□□□□ -1.85
VRK1-202ENST00000553683 TGFB3P10600 412 aa3.52□□□□□ -1.85
VRK1-202ENST00000553683 RFC1P35251 1148 aaPredicted RBP3.52□□□□□ -1.85
VRK1-202ENST00000553683 PPP3CCP48454 512 aa3.52□□□□□ -1.85
VRK1-202ENST00000553683 BLKP51451 505 aa3.52□□□□□ -1.85
VRK1-202ENST00000553683 ABATP80404 500 aa3.52□□□□□ -1.85
VRK1-202ENST00000553683 TRAF1Q13077 416 aa3.52□□□□□ -1.85
VRK1-202ENST00000553683 IL13RA2Q14627 380 aa3.52□□□□□ -1.85
VRK1-202ENST00000553683 KLHL22Q53GT1 634 aa3.52□□□□□ -1.85
VRK1-202ENST00000553683 EFHC1Q5JVL4 640 aa3.52□□□□□ -1.85
VRK1-202ENST00000553683 NAA35Q5VZE5 725 aa3.52□□□□□ -1.85
VRK1-202ENST00000553683 RUSC1-AS1Q66K80 236 aa3.52□□□□□ -1.85
VRK1-202ENST00000553683 SYNE3Q6ZMZ3 975 aa3.52□□□□□ -1.85
VRK1-202ENST00000553683 Q6ZSV7 163 aa3.52□□□□□ -1.85
VRK1-202ENST00000553683 NEK10Q6ZWH5 1172 aa3.52□□□□□ -1.85
VRK1-202ENST00000553683 TRILQ7L0X0 811 aa3.52□□□□□ -1.85
VRK1-202ENST00000553683 ZNF367Q7RTV3 350 aa3.52□□□□□ -1.85
VRK1-202ENST00000553683 ANKRD18AQ8IVF6 992 aa3.52□□□□□ -1.85
VRK1-202ENST00000553683 LINS1Q8NG48 757 aa3.52□□□□□ -1.85
VRK1-202ENST00000553683 FAM216AQ8WUB2 273 aa3.52□□□□□ -1.85
VRK1-202ENST00000553683 TRIM63Q969Q1 353 aa3.52□□□□□ -1.85
VRK1-202ENST00000553683 RBM17Q96I25 401 aaKnown RBP3.52□□□□□ -1.85
VRK1-202ENST00000553683 PYM1Q9BRP8 204 aaKnown RBP3.52□□□□□ -1.85
VRK1-202ENST00000553683 SEZ6LQ9BYH1 1024 aa3.52□□□□□ -1.85
VRK1-202ENST00000553683 RMI1Q9H9A7 625 aa3.52□□□□□ -1.85
VRK1-202ENST00000553683 ENTPD7Q9NQZ7 604 aa3.52□□□□□ -1.85
VRK1-202ENST00000553683 CNPY2Q9Y2B0 182 aa3.52□□□□□ -1.85
VRK1-202ENST00000553683 A0A0A0MQY5 61 aa3.51□□□□□ -1.85
VRK1-202ENST00000553683 GOLGA6L10A0A0M3HER8 536 aa3.51□□□□□ -1.85
VRK1-202ENST00000553683 C4orf47A7E2U8 309 aa3.51□□□□□ -1.85
VRK1-202ENST00000553683 STX16-NPEPL1H3BU86 382 aa3.51□□□□□ -1.85
VRK1-202ENST00000553683 STX16O14662 325 aa3.51□□□□□ -1.85
VRK1-202ENST00000553683 LDB2O43679 373 aa3.51□□□□□ -1.85
VRK1-202ENST00000553683 PEX14O75381 377 aa3.51□□□□□ -1.85
VRK1-202ENST00000553683 IL1AP01583 271 aa3.51□□□□□ -1.85
VRK1-202ENST00000553683 NAGAP17050 411 aa3.51□□□□□ -1.85
VRK1-202ENST00000553683 MYF6P23409 242 aa3.51□□□□□ -1.85
VRK1-202ENST00000553683 GPD2P43304 727 aa3.51□□□□□ -1.85
VRK1-202ENST00000553683 CCT5P48643 541 aa3.51□□□□□ -1.85
VRK1-202ENST00000553683 AMTP48728 403 aa3.51□□□□□ -1.85
VRK1-202ENST00000553683 NUDT6P53370 316 aa3.51□□□□□ -1.85
VRK1-202ENST00000553683 SEC61A1P61619 476 aaKnown RBP3.51□□□□□ -1.85
VRK1-202ENST00000553683 KEAP1Q14145 624 aa3.51□□□□□ -1.85
VRK1-202ENST00000553683 SHBQ15464 509 aa3.51□□□□□ -1.85
VRK1-202ENST00000553683 PLEKHO1Q53GL0 409 aaPredicted RBP3.51□□□□□ -1.85
VRK1-202ENST00000553683 MAP3K21Q5TCX8 1036 aa3.51□□□□□ -1.85
VRK1-202ENST00000553683 ATG9BQ674R7 924 aa3.51□□□□□ -1.85
VRK1-202ENST00000553683 BBS12Q6ZW61 710 aa3.51□□□□□ -1.85
VRK1-202ENST00000553683 MON1BQ7L1V2 547 aa3.51□□□□□ -1.85
VRK1-202ENST00000553683 PALB2Q86YC2 1186 aa3.51□□□□□ -1.85
VRK1-202ENST00000553683 C2CD5Q86YS7 1000 aa3.51□□□□□ -1.85
VRK1-202ENST00000553683 CEP70Q8NHQ1 597 aa3.51□□□□□ -1.85
VRK1-202ENST00000553683 NOC3LQ8WTT2 800 aaKnown RBP3.51□□□□□ -1.85
VRK1-202ENST00000553683 TMEM18Q96B42 140 aa3.51□□□□□ -1.85
VRK1-202ENST00000553683 OTULINQ96BN8 352 aa3.51□□□□□ -1.85
VRK1-202ENST00000553683 RNFT2Q96EX2 444 aa3.51□□□□□ -1.85
VRK1-202ENST00000553683 TWNKQ96RR1 684 aa3.51□□□□□ -1.85
VRK1-202ENST00000553683 CD180Q99467 661 aa3.51□□□□□ -1.85
VRK1-202ENST00000553683 POLDIP3Q9BY77 421 aaKnown RBP3.51□□□□□ -1.85
VRK1-202ENST00000553683 ACAD9Q9H845 621 aa3.51□□□□□ -1.85
VRK1-202ENST00000553683 IFT80Q9P2H3 777 aaPredicted RBP3.51□□□□□ -1.85
VRK1-202ENST00000553683 PTGDR2Q9Y5Y4 395 aa3.51□□□□□ -1.85
VRK1-202ENST00000553683 IGHV4-28A0A0C4DH34 117 aa3.5□□□□□ -1.85
VRK1-202ENST00000553683 C17orf113A0A1B0GUU1 675 aa3.5□□□□□ -1.85
VRK1-202ENST00000553683 VWA3AA6NCI4 1184 aa3.5□□□□□ -1.85
VRK1-202ENST00000553683 EBAG9O00559 213 aa3.5□□□□□ -1.85
VRK1-202ENST00000553683 LIASO43766 372 aa3.5□□□□□ -1.85
VRK1-202ENST00000553683 NBNO60934 754 aa3.5□□□□□ -1.85
VRK1-202ENST00000553683 CLDN7O95471 211 aa3.5□□□□□ -1.85
VRK1-202ENST00000553683 PRSS2P07478 247 aa3.5□□□□□ -1.85
VRK1-202ENST00000553683 HALP42357 657 aa3.5□□□□□ -1.85
VRK1-202ENST00000553683 RFX5P48382 616 aaPredicted RBP3.5□□□□□ -1.85
VRK1-202ENST00000553683 ECT2LQ008S8 904 aa3.5□□□□□ -1.85
VRK1-202ENST00000553683 FAM27E3Q08E93 113 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms